RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 SLX4Q8IY92 1834 aa10.68□□□□□ -0.7
HPS4-207ENST00000459918 BCORQ6W2J9 1755 aa10.67□□□□□ -0.7
HPS4-207ENST00000459918 POTEIP0CG38 1075 aa10.67□□□□□ -0.7
HPS4-207ENST00000459918 POTEJP0CG39 1038 aa10.67□□□□□ -0.7
HPS4-207ENST00000459918 PRR5LQ6MZQ0 368 aa10.67□□□□□ -0.7
HPS4-207ENST00000459918 PRPF40BQ6NWY9 871 aaKnown RBP10.67□□□□□ -0.7
HPS4-207ENST00000459918 TIMELESSQ9UNS1 1208 aa10.67□□□□□ -0.7
HPS4-207ENST00000459918 CNTNAP1P78357 1384 aa10.66□□□□□ -0.7
HPS4-207ENST00000459918 POTECB2RU33 542 aa10.66□□□□□ -0.7
HPS4-207ENST00000459918 FOXN1O15353 648 aa10.66□□□□□ -0.7
HPS4-207ENST00000459918 HSPA5P11021 654 aaKnown RBP10.66□□□□□ -0.7
HPS4-207ENST00000459918 CNGB1Q14028 1251 aaPredicted RBP10.66□□□□□ -0.7
HPS4-207ENST00000459918 MTHFSDQ2M296 383 aaKnown RBP10.66□□□□□ -0.7
HPS4-207ENST00000459918 LDHDQ86WU2 507 aa10.66□□□□□ -0.7
HPS4-207ENST00000459918 PCGF6Q9BYE7 350 aa10.66□□□□□ -0.7
HPS4-207ENST00000459918 U2SURPO15042 1029 aaKnown RBP10.65□□□□□ -0.7
HPS4-207ENST00000459918 ZBTB22O15209 634 aa10.65□□□□□ -0.7
HPS4-207ENST00000459918 DIAPH1O60610 1272 aaKnown RBP10.65□□□□□ -0.7
HPS4-207ENST00000459918 CTCFP49711 727 aaPredicted RBP10.65□□□□□ -0.7
HPS4-207ENST00000459918 EIF5P55010 431 aaKnown RBP10.65□□□□□ -0.7
HPS4-207ENST00000459918 PAXIP1Q6ZW49 1069 aaPredicted RBP10.65□□□□□ -0.7
HPS4-207ENST00000459918 TEX13AQ9BXU3 409 aaPredicted RBP10.65□□□□□ -0.7
HPS4-207ENST00000459918 SIPA1L3O60292 1781 aaPredicted RBP10.65□□□□□ -0.71
HPS4-207ENST00000459918 HEG1Q9ULI3 1381 aa10.65□□□□□ -0.71
HPS4-207ENST00000459918 LTBP3Q9NS15 1303 aa10.64□□□□□ -0.71
HPS4-207ENST00000459918 TMEM88BA6NKF7 163 aa10.64□□□□□ -0.71
HPS4-207ENST00000459918 IL6STP40189 918 aaPredicted RBP10.64□□□□□ -0.71
HPS4-207ENST00000459918 TRIM26Q12899 539 aaPredicted RBP10.64□□□□□ -0.71
HPS4-207ENST00000459918 CCDC93Q567U6 631 aa10.64□□□□□ -0.71
HPS4-207ENST00000459918 STYK1Q6J9G0 422 aa10.64□□□□□ -0.71
HPS4-207ENST00000459918 NBPF5PQ86XG9 351 aaPredicted RBP10.64□□□□□ -0.71
HPS4-207ENST00000459918 MASTLQ96GX5 879 aa10.64□□□□□ -0.71
HPS4-207ENST00000459918 ZNF496Q96IT1 587 aaPredicted RBP10.64□□□□□ -0.71
HPS4-207ENST00000459918 FMNL2Q96PY5 1086 aa10.64□□□□□ -0.71
HPS4-207ENST00000459918 ABT1Q9ULW3 272 aaKnown RBP10.64□□□□□ -0.71
HPS4-207ENST00000459918 GNAT3A8MTJ3 354 aa10.63□□□□□ -0.71
HPS4-207ENST00000459918 GRM1Q13255 1194 aa10.63□□□□□ -0.71
HPS4-207ENST00000459918 ZNF790Q6PG37 636 aa10.63□□□□□ -0.71
HPS4-207ENST00000459918 DZIP3Q86Y13 1208 aaKnown RBP10.63□□□□□ -0.71
HPS4-207ENST00000459918 PRDM10Q9NQV6 1147 aa10.63□□□□□ -0.71
HPS4-207ENST00000459918 ZNF652Q9Y2D9 606 aa10.63□□□□□ -0.71
HPS4-207ENST00000459918 FAM177BA6PVY3 158 aa10.62□□□□□ -0.71
HPS4-207ENST00000459918 SRGNP10124 158 aa10.62□□□□□ -0.71
HPS4-207ENST00000459918 GTF2E1P29083 439 aaPredicted RBP10.62□□□□□ -0.71
HPS4-207ENST00000459918 VEGFBP49765 207 aa10.62□□□□□ -0.71
HPS4-207ENST00000459918 LBX1P52954 281 aa10.62□□□□□ -0.71
HPS4-207ENST00000459918 CC2D1BQ5T0F9 858 aaKnown RBP10.62□□□□□ -0.71
HPS4-207ENST00000459918 GAS2L2Q8NHY3 880 aa10.62□□□□□ -0.71
HPS4-207ENST00000459918 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
HPS4-207ENST00000459918 TAF1DQ9H5J8 278 aaPredicted RBP10.62□□□□□ -0.71
HPS4-207ENST00000459918 HACL1Q9UJ83 578 aa10.62□□□□□ -0.71
HPS4-207ENST00000459918 RNF123Q5XPI4 1314 aa10.61□□□□□ -0.71
HPS4-207ENST00000459918 PASKQ96RG2 1323 aa10.61□□□□□ -0.71
HPS4-207ENST00000459918 A1BGP04217 495 aa10.61□□□□□ -0.71
HPS4-207ENST00000459918 EPHX2P34913 555 aa10.61□□□□□ -0.71
HPS4-207ENST00000459918 PNMA8AQ86V59 439 aaPredicted RBP10.61□□□□□ -0.71
HPS4-207ENST00000459918 ZNF277Q9NRM2 450 aaPredicted RBP10.61□□□□□ -0.71
HPS4-207ENST00000459918 ZNF541Q9H0D2 1346 aa10.6□□□□□ -0.71
HPS4-207ENST00000459918 BTBD11A6QL63 1104 aa10.6□□□□□ -0.71
HPS4-207ENST00000459918 NPR1P16066 1061 aa10.6□□□□□ -0.71
HPS4-207ENST00000459918 LMOD1P29536 600 aaPredicted RBP10.6□□□□□ -0.71
HPS4-207ENST00000459918 PIP4K2AP48426 406 aaPredicted RBP10.6□□□□□ -0.71
HPS4-207ENST00000459918 FKBP4Q02790 459 aaKnown RBP eCLIP10.6□□□□□ -0.71
HPS4-207ENST00000459918 DEFB115Q30KQ5 88 aa10.6□□□□□ -0.71
HPS4-207ENST00000459918 MAP1SQ66K74 1059 aaPredicted RBP10.6□□□□□ -0.71
HPS4-207ENST00000459918 L3MBTL3Q96JM7 780 aaPredicted RBP10.6□□□□□ -0.71
HPS4-207ENST00000459918 CFAP44Q96MT7 982 aa10.6□□□□□ -0.71
HPS4-207ENST00000459918 CAMTA2O94983 1202 aa10.59□□□□□ -0.71
HPS4-207ENST00000459918 MAP2K1Q02750 393 aaPredicted RBP10.59□□□□□ -0.71
HPS4-207ENST00000459918 FAM161AQ3B820 660 aa10.59□□□□□ -0.71
HPS4-207ENST00000459918 TPTE2Q6XPS3 522 aa10.59□□□□□ -0.71
HPS4-207ENST00000459918 RTKN2Q8IZC4 609 aa10.59□□□□□ -0.71
HPS4-207ENST00000459918 CNTROBQ8N137 903 aa10.59□□□□□ -0.71
HPS4-207ENST00000459918 JDP2Q8WYK2 163 aa10.59□□□□□ -0.71
HPS4-207ENST00000459918 NIP7Q9Y221 180 aaKnown RBP eCLIP10.59□□□□□ -0.71
HPS4-207ENST00000459918 GJA3Q9Y6H8 435 aa10.59□□□□□ -0.71
HPS4-207ENST00000459918 WDR33Q9C0J8 1336 aaKnown RBP10.58□□□□□ -0.71
HPS4-207ENST00000459918 ADAMTSL1Q8N6G6 1762 aa10.58□□□□□ -0.72
HPS4-207ENST00000459918 CCDC85CA6NKD9 419 aa10.58□□□□□ -0.72
HPS4-207ENST00000459918 IARSP41252 1262 aaKnown RBP10.58□□□□□ -0.72
HPS4-207ENST00000459918 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
HPS4-207ENST00000459918 ABHD8Q96I13 439 aa10.58□□□□□ -0.72
HPS4-207ENST00000459918 CLSPNQ9HAW4 1339 aa10.58□□□□□ -0.72
HPS4-207ENST00000459918 ALDH1B1P30837 517 aa10.57□□□□□ -0.72
HPS4-207ENST00000459918 EIF6P56537 245 aaKnown RBP10.57□□□□□ -0.72
HPS4-207ENST00000459918 OLFM4Q6UX06 510 aa10.57□□□□□ -0.72
HPS4-207ENST00000459918 IL17REQ8NFR9 667 aa10.57□□□□□ -0.72
HPS4-207ENST00000459918 RTF1Q92541 710 aaKnown RBP10.57□□□□□ -0.72
HPS4-207ENST00000459918 WBP1LQ9NX94 342 aa10.57□□□□□ -0.72
HPS4-207ENST00000459918 TRPM7Q96QT4 1865 aa10.57□□□□□ -0.72
HPS4-207ENST00000459918 LAMB4A4D0S4 1761 aa10.57□□□□□ -0.72
HPS4-207ENST00000459918 RASSF10A6NK89 507 aa10.56□□□□□ -0.72
HPS4-207ENST00000459918 ITGBL1O95965 494 aaPredicted RBP10.56□□□□□ -0.72
HPS4-207ENST00000459918 HSPA8P11142 646 aaKnown RBP10.56□□□□□ -0.72
HPS4-207ENST00000459918 ECE1P42892 770 aa10.56□□□□□ -0.72
HPS4-207ENST00000459918 CLEC4GQ6UXB4 293 aa10.56□□□□□ -0.72
HPS4-207ENST00000459918 CHRDL2Q6WN34 429 aa10.56□□□□□ -0.72
HPS4-207ENST00000459918 GPC2Q8N158 579 aa10.56□□□□□ -0.72
HPS4-207ENST00000459918 RPGRQ92834 1020 aaKnown RBP10.56□□□□□ -0.72
HPS4-207ENST00000459918 KCNQ3O43525 872 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms