RNA–Protein interactions for RNA: ENST00000458090.1

AC009963.3-201, humanhuman

BASIC

Gene AC009963.3, Length 486 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009963.3-201ENST00000458090 SCN4AP35499 1836 aa8.22□□□□□ -1.09
AC009963.3-201ENST00000458090 CEMIPQ8WUJ3 1361 aa8.22□□□□□ -1.09
AC009963.3-201ENST00000458090 IQCA1LA6NCM1 817 aa8.21□□□□□ -1.1
AC009963.3-201ENST00000458090 C21orf2O43822 256 aa8.21□□□□□ -1.1
AC009963.3-201ENST00000458090 GTF2E1P29083 439 aaPredicted RBP8.21□□□□□ -1.1
AC009963.3-201ENST00000458090 RASSF7Q02833 373 aa8.21□□□□□ -1.1
AC009963.3-201ENST00000458090 PRR5LQ6MZQ0 368 aa8.21□□□□□ -1.1
AC009963.3-201ENST00000458090 NBPF5PQ86XG9 351 aaPredicted RBP8.21□□□□□ -1.1
AC009963.3-201ENST00000458090 JMYQ8N9B5 988 aa8.21□□□□□ -1.1
AC009963.3-201ENST00000458090 LTBP3Q9NS15 1303 aa8.21□□□□□ -1.1
AC009963.3-201ENST00000458090 COL3A1P02461 1466 aaPredicted RBP8.2□□□□□ -1.1
AC009963.3-201ENST00000458090 A1BGP04217 495 aa8.2□□□□□ -1.1
AC009963.3-201ENST00000458090 GRIPAP1Q4V328 841 aa8.2□□□□□ -1.1
AC009963.3-201ENST00000458090 RTKN2Q8IZC4 609 aa8.2□□□□□ -1.1
AC009963.3-201ENST00000458090 RSPH6AQ9H0K4 717 aa8.2□□□□□ -1.1
AC009963.3-201ENST00000458090 TMX4Q9H1E5 349 aaPredicted RBP8.2□□□□□ -1.1
AC009963.3-201ENST00000458090 SLX4Q8IY92 1834 aa8.19□□□□□ -1.1
AC009963.3-201ENST00000458090 CAMTA2O94983 1202 aa8.19□□□□□ -1.1
AC009963.3-201ENST00000458090 SRGNP10124 158 aa8.19□□□□□ -1.1
AC009963.3-201ENST00000458090 NPR1P16066 1061 aa8.19□□□□□ -1.1
AC009963.3-201ENST00000458090 TAF7Q15545 349 aaPredicted RBP8.19□□□□□ -1.1
AC009963.3-201ENST00000458090 CCDC93Q567U6 631 aa8.19□□□□□ -1.1
AC009963.3-201ENST00000458090 NYXQ9GZU5 481 aa8.19□□□□□ -1.1
AC009963.3-201ENST00000458090 LAMB4A4D0S4 1761 aa8.19□□□□□ -1.1
AC009963.3-201ENST00000458090 DLG5Q8TDM6 1919 aa8.19□□□□□ -1.1
AC009963.3-201ENST00000458090 COL11A2P13942 1736 aaPredicted RBP8.18□□□□□ -1.1
AC009963.3-201ENST00000458090 NUP98P52948 1817 aa8.18□□□□□ -1.1
AC009963.3-201ENST00000458090 NFKBIEO00221 500 aa8.18□□□□□ -1.1
AC009963.3-201ENST00000458090 CC2D2BQ6DHV5 1058 aa8.18□□□□□ -1.1
AC009963.3-201ENST00000458090 CHADLQ6NUI6 762 aa8.18□□□□□ -1.1
AC009963.3-201ENST00000458090 PRPF40BQ6NWY9 871 aaKnown RBP8.18□□□□□ -1.1
AC009963.3-201ENST00000458090 PHACTR3Q96KR7 559 aa8.18□□□□□ -1.1
AC009963.3-201ENST00000458090 ZNF219Q9P2Y4 722 aaPredicted RBP8.18□□□□□ -1.1
AC009963.3-201ENST00000458090 NIP7Q9Y221 180 aaKnown RBP eCLIP8.18□□□□□ -1.1
AC009963.3-201ENST00000458090 USP16Q9Y5T5 823 aa8.18□□□□□ -1.1
AC009963.3-201ENST00000458090 PPP2R1AP30153 589 aa8.17□□□□□ -1.1
AC009963.3-201ENST00000458090 KIF6Q6ZMV9 814 aa8.17□□□□□ -1.1
AC009963.3-201ENST00000458090 JDP2Q8WYK2 163 aa8.17□□□□□ -1.1
AC009963.3-201ENST00000458090 MAPK8IP3Q9UPT6 1336 aa8.17□□□□□ -1.1
AC009963.3-201ENST00000458090 ERVV-1B6SEH8 477 aa8.16□□□□□ -1.1
AC009963.3-201ENST00000458090 FKBP4Q02790 459 aaKnown RBP eCLIP8.16□□□□□ -1.1
AC009963.3-201ENST00000458090 MCM10Q7L590 875 aa8.16□□□□□ -1.1
AC009963.3-201ENST00000458090 PNMA8AQ86V59 439 aaPredicted RBP8.16□□□□□ -1.1
AC009963.3-201ENST00000458090 LDHDQ86WU2 507 aa8.16□□□□□ -1.1
AC009963.3-201ENST00000458090 TNS4Q8IZW8 715 aa8.16□□□□□ -1.1
AC009963.3-201ENST00000458090 CREBZFQ9NS37 354 aa8.16□□□□□ -1.1
AC009963.3-201ENST00000458090 KLRG2A4D1S0 409 aaPredicted RBP8.15□□□□□ -1.1
AC009963.3-201ENST00000458090 KCNQ3O43525 872 aa8.15□□□□□ -1.1
AC009963.3-201ENST00000458090 DDNO94850 711 aaPredicted RBP8.15□□□□□ -1.1
AC009963.3-201ENST00000458090 EIF6P56537 245 aaKnown RBP8.15□□□□□ -1.1
AC009963.3-201ENST00000458090 HTRA3P83110 453 aa8.15□□□□□ -1.1
AC009963.3-201ENST00000458090 CCDC24Q8N4L8 307 aa8.15□□□□□ -1.1
AC009963.3-201ENST00000458090 RPGRQ92834 1020 aaKnown RBP8.15□□□□□ -1.1
AC009963.3-201ENST00000458090 CLEC11AQ9Y240 323 aa8.15□□□□□ -1.1
AC009963.3-201ENST00000458090 KDM3BQ7LBC6 1761 aa8.15□□□□□ -1.11
AC009963.3-201ENST00000458090 CEP350Q5VT06 3117 aa8.14□□□□□ -1.11
AC009963.3-201ENST00000458090 ERBB4Q15303 1308 aa8.14□□□□□ -1.11
AC009963.3-201ENST00000458090 LMOD1P29536 600 aaPredicted RBP8.14□□□□□ -1.11
AC009963.3-201ENST00000458090 LMOD3Q0VAK6 560 aa8.14□□□□□ -1.11
AC009963.3-201ENST00000458090 PPP1R42Q7Z4L9 355 aa8.14□□□□□ -1.11
AC009963.3-201ENST00000458090 AIDAQ96BJ3 306 aa8.14□□□□□ -1.11
AC009963.3-201ENST00000458090 RBM17Q96I25 401 aaKnown RBP8.14□□□□□ -1.11
AC009963.3-201ENST00000458090 L3MBTL3Q96JM7 780 aaPredicted RBP8.14□□□□□ -1.11
AC009963.3-201ENST00000458090 HACL1Q9UJ83 578 aa8.14□□□□□ -1.11
AC009963.3-201ENST00000458090 IBTKQ9P2D0 1353 aaPredicted RBP8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 FAM177BA6PVY3 158 aa8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 POTECB2RU33 542 aa8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 HSPA1AP0DMV8 641 aaKnown RBP8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 HSPA1BP0DMV9 641 aaKnown RBP8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 IARSP41252 1262 aaKnown RBP8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 PIP4K2AP48426 406 aaPredicted RBP8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 PRELPP51888 382 aa8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 DCTN1Q14203 1278 aa8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 PARP10Q53GL7 1025 aa8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 EAPPQ56P03 285 aaPredicted RBP8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 GPC2Q8N158 579 aa8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 NGEFQ8N5V2 710 aa8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 PSMD1Q99460 953 aa8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 VPS33BQ9H267 617 aa8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 BABAM1Q9NWV8 329 aa8.13□□□□□ -1.11
AC009963.3-201ENST00000458090 MAP3K15Q6ZN16 1313 aa8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 TMEM88BA6NKF7 163 aa8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 NBPF26B4DH59 902 aa8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 EPHX2P34913 555 aa8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 NFE2L2Q16236 605 aa8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 HSP90AB3PQ58FF7 597 aa8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 COL13A1Q5TAT6 717 aaPredicted RBP8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 NBPF10Q6P3W6 841 aaKnown RBP8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 SYNE4Q8N205 404 aa8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 NBPF15Q8N660 670 aa8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 SUPT20HQ8NEM7 779 aa8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 C7orf43Q8WVR3 580 aa8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 NLRP3Q96P20 1036 aa8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 TAF1DQ9H5J8 278 aaPredicted RBP8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 ZNF277Q9NRM2 450 aaPredicted RBP8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 RRP7AQ9Y3A4 280 aaKnown RBP8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 RIC1Q4ADV7 1423 aa8.12□□□□□ -1.11
AC009963.3-201ENST00000458090 RNF123Q5XPI4 1314 aa8.11□□□□□ -1.11
AC009963.3-201ENST00000458090 PRAMEF22A3QJZ6 481 aa8.11□□□□□ -1.11
AC009963.3-201ENST00000458090 FZD9O00144 591 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms