RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 ZNF622Q969S3 477 aaKnown RBP eCLIP19.39■□□□□ 0.69
UPF3AP2-201ENST00000457924 TBC1D9BQ66K14 1250 aa19.38■□□□□ 0.69
UPF3AP2-201ENST00000457924 POTEHQ6S545 545 aa19.38■□□□□ 0.69
UPF3AP2-201ENST00000457924 ANKRD31Q8N7Z5 1873 aa19.38■□□□□ 0.69
UPF3AP2-201ENST00000457924 TEX13AQ9BXU3 409 aaPredicted RBP19.38■□□□□ 0.69
UPF3AP2-201ENST00000457924 BRIP1Q9BX63 1249 aa19.37■□□□□ 0.69
UPF3AP2-201ENST00000457924 ZNF330Q9Y3S2 320 aaPredicted RBP19.37■□□□□ 0.69
UPF3AP2-201ENST00000457924 DICER1Q9UPY3 1922 aaKnown RBP19.37■□□□□ 0.69
UPF3AP2-201ENST00000457924 C21orf2O43822 256 aa19.36■□□□□ 0.69
UPF3AP2-201ENST00000457924 TEFQ10587 303 aa19.36■□□□□ 0.69
UPF3AP2-201ENST00000457924 ERFEQ4G0M1 354 aa19.36■□□□□ 0.69
UPF3AP2-201ENST00000457924 ZNF496Q96IT1 587 aaPredicted RBP19.36■□□□□ 0.69
UPF3AP2-201ENST00000457924 SCN7AQ01118 1682 aa19.36■□□□□ 0.69
UPF3AP2-201ENST00000457924 FER1L6Q2WGJ9 1857 aa19.35■□□□□ 0.69
UPF3AP2-201ENST00000457924 HEG1Q9ULI3 1381 aa19.35■□□□□ 0.69
UPF3AP2-201ENST00000457924 PRR5LQ6MZQ0 368 aa19.35■□□□□ 0.69
UPF3AP2-201ENST00000457924 ZNF790Q6PG37 636 aa19.35■□□□□ 0.69
UPF3AP2-201ENST00000457924 NPM2Q86SE8 214 aaKnown RBP19.35■□□□□ 0.69
UPF3AP2-201ENST00000457924 TBC1D2BQ9UPU7 963 aa19.35■□□□□ 0.69
UPF3AP2-201ENST00000457924 KIF7Q2M1P5 1343 aa19.34■□□□□ 0.69
UPF3AP2-201ENST00000457924 GNAT3A8MTJ3 354 aa19.34■□□□□ 0.69
UPF3AP2-201ENST00000457924 POTECB2RU33 542 aa19.34■□□□□ 0.69
UPF3AP2-201ENST00000457924 HSPA1AP0DMV8 641 aaKnown RBP19.34■□□□□ 0.69
UPF3AP2-201ENST00000457924 HSPA1BP0DMV9 641 aaKnown RBP19.34■□□□□ 0.69
UPF3AP2-201ENST00000457924 IL6STP40189 918 aaPredicted RBP19.34■□□□□ 0.69
UPF3AP2-201ENST00000457924 CC2D1BQ5T0F9 858 aaKnown RBP19.34■□□□□ 0.69
UPF3AP2-201ENST00000457924 COL11A2P13942 1736 aaPredicted RBP19.34■□□□□ 0.69
UPF3AP2-201ENST00000457924 NPHP1O15259 732 aa19.33■□□□□ 0.68
UPF3AP2-201ENST00000457924 CCDC24Q8N4L8 307 aa19.33■□□□□ 0.68
UPF3AP2-201ENST00000457924 GAS2L2Q8NHY3 880 aa19.33■□□□□ 0.68
UPF3AP2-201ENST00000457924 SIPA1L3O60292 1781 aaPredicted RBP19.32■□□□□ 0.68
UPF3AP2-201ENST00000457924 U2SURPO15042 1029 aaKnown RBP19.32■□□□□ 0.68
UPF3AP2-201ENST00000457924 IL17REQ8NFR9 667 aa19.32■□□□□ 0.68
UPF3AP2-201ENST00000457924 CNKSR1Q969H4 720 aa19.32■□□□□ 0.68
UPF3AP2-201ENST00000457924 SETDB2Q96T68 719 aa19.32■□□□□ 0.68
UPF3AP2-201ENST00000457924 TAOK3Q9H2K8 898 aa19.32■□□□□ 0.68
UPF3AP2-201ENST00000457924 LTBP3Q9NS15 1303 aa19.31■□□□□ 0.68
UPF3AP2-201ENST00000457924 CACNA1SQ13698 1873 aa19.31■□□□□ 0.68
UPF3AP2-201ENST00000457924 PER1O15534 1290 aaPredicted RBP19.31■□□□□ 0.68
UPF3AP2-201ENST00000457924 ST5P78524 1137 aa19.31■□□□□ 0.68
UPF3AP2-201ENST00000457924 CNBD1Q8NA66 436 aa19.31■□□□□ 0.68
UPF3AP2-201ENST00000457924 FMNL2Q96PY5 1086 aa19.31■□□□□ 0.68
UPF3AP2-201ENST00000457924 CCER1Q8TC90 406 aaPredicted RBP19.3■□□□□ 0.68
UPF3AP2-201ENST00000457924 PCNTO95613 3336 aa19.3■□□□□ 0.68
UPF3AP2-201ENST00000457924 A1BGP04217 495 aa19.29■□□□□ 0.68
UPF3AP2-201ENST00000457924 SOGA3Q5TF21 947 aa19.29■□□□□ 0.68
UPF3AP2-201ENST00000457924 STYK1Q6J9G0 422 aa19.29■□□□□ 0.68
UPF3AP2-201ENST00000457924 SLX4Q8IY92 1834 aa19.29■□□□□ 0.68
UPF3AP2-201ENST00000457924 CAMTA2O94983 1202 aa19.28■□□□□ 0.68
UPF3AP2-201ENST00000457924 SRGNP10124 158 aa19.28■□□□□ 0.68
UPF3AP2-201ENST00000457924 MASTLQ96GX5 879 aa19.28■□□□□ 0.68
UPF3AP2-201ENST00000457924 COL3A1P02461 1466 aaPredicted RBP19.28■□□□□ 0.68
UPF3AP2-201ENST00000457924 BCORQ6W2J9 1755 aa19.27■□□□□ 0.68
UPF3AP2-201ENST00000457924 ARFGEF2Q9Y6D5 1785 aa19.27■□□□□ 0.68
UPF3AP2-201ENST00000457924 DDNO94850 711 aaPredicted RBP19.27■□□□□ 0.68
UPF3AP2-201ENST00000457924 PRPF40BQ6NWY9 871 aaKnown RBP19.27■□□□□ 0.68
UPF3AP2-201ENST00000457924 DZIP3Q86Y13 1208 aaKnown RBP19.27■□□□□ 0.68
UPF3AP2-201ENST00000457924 SPOCK2Q92563 424 aa19.27■□□□□ 0.68
UPF3AP2-201ENST00000457924 BTBD11A6QL63 1104 aa19.26■□□□□ 0.67
UPF3AP2-201ENST00000457924 NUBP1P53384 320 aa19.26■□□□□ 0.67
UPF3AP2-201ENST00000457924 CEMIPQ8WUJ3 1361 aa19.25■□□□□ 0.67
UPF3AP2-201ENST00000457924 CNGB1Q14028 1251 aaPredicted RBP19.25■□□□□ 0.67
UPF3AP2-201ENST00000457924 MKRN1Q9UHC7 482 aaKnown RBP19.25■□□□□ 0.67
UPF3AP2-201ENST00000457924 IQCA1LA6NCM1 817 aa19.24■□□□□ 0.67
UPF3AP2-201ENST00000457924 KCNQ3O43525 872 aa19.24■□□□□ 0.67
UPF3AP2-201ENST00000457924 NBPF5PQ86XG9 351 aaPredicted RBP19.24■□□□□ 0.67
UPF3AP2-201ENST00000457924 NPC1L1Q9UHC9 1359 aa19.23■□□□□ 0.67
UPF3AP2-201ENST00000457924 POTEIP0CG38 1075 aa19.23■□□□□ 0.67
UPF3AP2-201ENST00000457924 POTEJP0CG39 1038 aa19.23■□□□□ 0.67
UPF3AP2-201ENST00000457924 CLEC4GQ6UXB4 293 aa19.23■□□□□ 0.67
UPF3AP2-201ENST00000457924 ZNF652Q9Y2D9 606 aa19.23■□□□□ 0.67
UPF3AP2-201ENST00000457924 SCN4AP35499 1836 aa19.23■□□□□ 0.67
UPF3AP2-201ENST00000457924 CCDC93Q567U6 631 aa19.22■□□□□ 0.67
UPF3AP2-201ENST00000457924 USP16Q9Y5T5 823 aa19.22■□□□□ 0.67
UPF3AP2-201ENST00000457924 PRKAR2BP31323 418 aa19.21■□□□□ 0.67
UPF3AP2-201ENST00000457924 PIP4K2AP48426 406 aaPredicted RBP19.21■□□□□ 0.67
UPF3AP2-201ENST00000457924 LDHDQ86WU2 507 aa19.21■□□□□ 0.67
UPF3AP2-201ENST00000457924 PHACTR3Q96KR7 559 aa19.21■□□□□ 0.67
UPF3AP2-201ENST00000457924 NPR1P16066 1061 aa19.2■□□□□ 0.66
UPF3AP2-201ENST00000457924 L3MBTL3Q96JM7 780 aaPredicted RBP19.2■□□□□ 0.66
UPF3AP2-201ENST00000457924 CFAP53Q96M91 514 aa19.2■□□□□ 0.66
UPF3AP2-201ENST00000457924 SNRPA1P09661 255 aaKnown RBP19.19■□□□□ 0.66
UPF3AP2-201ENST00000457924 TPTE2Q6XPS3 522 aa19.19■□□□□ 0.66
UPF3AP2-201ENST00000457924 C7orf43Q8WVR3 580 aa19.19■□□□□ 0.66
UPF3AP2-201ENST00000457924 TAF1DQ9H5J8 278 aaPredicted RBP19.19■□□□□ 0.66
UPF3AP2-201ENST00000457924 PASKQ96RG2 1323 aa19.19■□□□□ 0.66
UPF3AP2-201ENST00000457924 CNTNAP1P78357 1384 aa19.19■□□□□ 0.66
UPF3AP2-201ENST00000457924 PRAMEF22A3QJZ6 481 aa19.18■□□□□ 0.66
UPF3AP2-201ENST00000457924 FKBP4Q02790 459 aaKnown RBP eCLIP19.18■□□□□ 0.66
UPF3AP2-201ENST00000457924 RTF1Q92541 710 aaKnown RBP19.18■□□□□ 0.66
UPF3AP2-201ENST00000457924 RSPH6AQ9H0K4 717 aa19.18■□□□□ 0.66
UPF3AP2-201ENST00000457924 RTKN2Q8IZC4 609 aa19.17■□□□□ 0.66
UPF3AP2-201ENST00000457924 ZNF277Q9NRM2 450 aaPredicted RBP19.17■□□□□ 0.66
UPF3AP2-201ENST00000457924 NIP7Q9Y221 180 aaKnown RBP eCLIP19.17■□□□□ 0.66
UPF3AP2-201ENST00000457924 NUDCQ9Y266 331 aa19.17■□□□□ 0.66
UPF3AP2-201ENST00000457924 KLRG2A4D1S0 409 aaPredicted RBP19.16■□□□□ 0.66
UPF3AP2-201ENST00000457924 RGL2O15211 777 aa19.16■□□□□ 0.66
UPF3AP2-201ENST00000457924 EAPPQ56P03 285 aaPredicted RBP19.16■□□□□ 0.66
UPF3AP2-201ENST00000457924 RASEFQ8IZ41 740 aa19.16■□□□□ 0.66
UPF3AP2-201ENST00000457924 TMEM88BA6NKF7 163 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms