RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 ARFGEF2Q9Y6D5 1785 aa14.07□□□□□ -0.16
NDUFA3-209ENST00000451517 NEURL1BA8MQ27 555 aa14.07□□□□□ -0.16
NDUFA3-209ENST00000451517 CWF19L2Q2TBE0 894 aaKnown RBP14.07□□□□□ -0.16
NDUFA3-209ENST00000451517 SKAP1Q86WV1 359 aa14.07□□□□□ -0.16
NDUFA3-209ENST00000451517 GCC1Q96CN9 775 aa14.07□□□□□ -0.16
NDUFA3-209ENST00000451517 MYD88Q99836 296 aa14.07□□□□□ -0.16
NDUFA3-209ENST00000451517 LRRFIP2Q9Y608 721 aaKnown RBP14.07□□□□□ -0.16
NDUFA3-209ENST00000451517 NBPF7P0C2Y1 421 aaPredicted RBP14.06□□□□□ -0.16
NDUFA3-209ENST00000451517 ATP6V1AP38606 617 aa14.06□□□□□ -0.16
NDUFA3-209ENST00000451517 ITPK1Q13572 414 aa14.06□□□□□ -0.16
NDUFA3-209ENST00000451517 FAM182BQ5T319 152 aa14.06□□□□□ -0.16
NDUFA3-209ENST00000451517 PTF1AQ7RTS3 328 aa14.06□□□□□ -0.16
NDUFA3-209ENST00000451517 ZBTB1Q9Y2K1 713 aa14.06□□□□□ -0.16
NDUFA3-209ENST00000451517 GRM8O00222 908 aa14.05□□□□□ -0.16
NDUFA3-209ENST00000451517 HMMRO75330 724 aa14.05□□□□□ -0.16
NDUFA3-209ENST00000451517 IL6STP40189 918 aaPredicted RBP14.05□□□□□ -0.16
NDUFA3-209ENST00000451517 ATP8B2P98198 1209 aa14.05□□□□□ -0.16
NDUFA3-209ENST00000451517 GCKRQ14397 625 aa14.05□□□□□ -0.16
NDUFA3-209ENST00000451517 INTS5Q6P9B9 1019 aaKnown RBP14.05□□□□□ -0.16
NDUFA3-209ENST00000451517 DCTPP1Q9H773 170 aa14.05□□□□□ -0.16
NDUFA3-209ENST00000451517 CCDC87Q9NVE4 849 aa14.05□□□□□ -0.16
NDUFA3-209ENST00000451517 C9orf78Q9NZ63 289 aaPredicted RBP14.05□□□□□ -0.16
NDUFA3-209ENST00000451517 BTAF1O14981 1849 aa14.05□□□□□ -0.16
NDUFA3-209ENST00000451517 SBF2Q86WG5 1849 aa14.04□□□□□ -0.16
NDUFA3-209ENST00000451517 CRKLP46109 303 aaKnown RBP14.04□□□□□ -0.16
NDUFA3-209ENST00000451517 NUCB1Q02818 461 aa14.04□□□□□ -0.16
NDUFA3-209ENST00000451517 KRT27Q7Z3Y8 459 aa14.04□□□□□ -0.16
NDUFA3-209ENST00000451517 HDAC5Q9UQL6 1122 aa14.04□□□□□ -0.16
NDUFA3-209ENST00000451517 COL5A3P25940 1745 aaPredicted RBP14.04□□□□□ -0.16
NDUFA3-209ENST00000451517 KAT6BQ8WYB5 2073 aa14.03□□□□□ -0.16
NDUFA3-209ENST00000451517 EIF5P55010 431 aaKnown RBP14.03□□□□□ -0.16
NDUFA3-209ENST00000451517 KIF6Q6ZMV9 814 aa14.03□□□□□ -0.16
NDUFA3-209ENST00000451517 FAM196AQ6ZSG2 479 aa14.03□□□□□ -0.16
NDUFA3-209ENST00000451517 BCL11BQ9C0K0 894 aaPredicted RBP14.03□□□□□ -0.16
NDUFA3-209ENST00000451517 ZBTB3Q9H5J0 574 aa14.03□□□□□ -0.16
NDUFA3-209ENST00000451517 MAP3K15Q6ZN16 1313 aa14.03□□□□□ -0.16
NDUFA3-209ENST00000451517 BRWD3Q6RI45 1802 aa14.02□□□□□ -0.16
NDUFA3-209ENST00000451517 COL15A1P39059 1388 aa14.02□□□□□ -0.17
NDUFA3-209ENST00000451517 PNMA6EA0A0J9YXQ4 647 aa14.02□□□□□ -0.17
NDUFA3-209ENST00000451517 MTX1Q13505 466 aa14.02□□□□□ -0.17
NDUFA3-209ENST00000451517 POLA2Q14181 598 aa14.02□□□□□ -0.17
NDUFA3-209ENST00000451517 SSH3Q8TE77 659 aa14.02□□□□□ -0.17
NDUFA3-209ENST00000451517 ISCA1Q9BUE6 129 aa14.02□□□□□ -0.17
NDUFA3-209ENST00000451517 CNTNAP4Q9C0A0 1308 aa14.01□□□□□ -0.17
NDUFA3-209ENST00000451517 ATP5J2-PTCD1G3V325 749 aa14.01□□□□□ -0.17
NDUFA3-209ENST00000451517 PDE4AP27815 886 aa14.01□□□□□ -0.17
NDUFA3-209ENST00000451517 RGS3P49796 1198 aa14.01□□□□□ -0.17
NDUFA3-209ENST00000451517 TRIM28Q13263 835 aaKnown RBP14.01□□□□□ -0.17
NDUFA3-209ENST00000451517 TCIRG1Q13488 830 aa14.01□□□□□ -0.17
NDUFA3-209ENST00000451517 CHD1LQ86WJ1 897 aa14.01□□□□□ -0.17
NDUFA3-209ENST00000451517 CCDC191Q8NCU4 936 aa14.01□□□□□ -0.17
NDUFA3-209ENST00000451517 LINC00116Q8NCU8 138 aa14.01□□□□□ -0.17
NDUFA3-209ENST00000451517 SUCLG2Q96I99 432 aa14.01□□□□□ -0.17
NDUFA3-209ENST00000451517 ZNF330Q9Y3S2 320 aaPredicted RBP14.01□□□□□ -0.17
NDUFA3-209ENST00000451517 LY75O60449 1722 aa14.01□□□□□ -0.17
NDUFA3-209ENST00000451517 ERVV-1B6SEH8 477 aa14□□□□□ -0.17
NDUFA3-209ENST00000451517 RXRBP28702 533 aa14□□□□□ -0.17
NDUFA3-209ENST00000451517 CASP7P55210 303 aa14□□□□□ -0.17
NDUFA3-209ENST00000451517 ANKRD45Q5TZF3 282 aa14□□□□□ -0.17
NDUFA3-209ENST00000451517 GIGYF2Q6Y7W6 1299 aaKnown RBP14□□□□□ -0.17
NDUFA3-209ENST00000451517 PPP1R42Q7Z4L9 355 aa14□□□□□ -0.17
NDUFA3-209ENST00000451517 KAZALD1Q96I82 304 aa14□□□□□ -0.17
NDUFA3-209ENST00000451517 TSHZ2Q9NRE2 1034 aa14□□□□□ -0.17
NDUFA3-209ENST00000451517 CWC25Q9NXE8 425 aaPredicted RBP14□□□□□ -0.17
NDUFA3-209ENST00000451517 RGS17Q9UGC6 210 aaPredicted RBP14□□□□□ -0.17
NDUFA3-209ENST00000451517 AFDNP55196 1824 aaKnown RBP13.99□□□□□ -0.17
NDUFA3-209ENST00000451517 H7C1W4 665 aa13.99□□□□□ -0.17
NDUFA3-209ENST00000451517 HSP90AB3PQ58FF7 597 aa13.99□□□□□ -0.17
NDUFA3-209ENST00000451517 RC3H1Q5TC82 1133 aaKnown RBP13.99□□□□□ -0.17
NDUFA3-209ENST00000451517 DZIP3Q86Y13 1208 aaKnown RBP13.99□□□□□ -0.17
NDUFA3-209ENST00000451517 A0A087WZG4 1122 aa13.98□□□□□ -0.17
NDUFA3-209ENST00000451517 HLFQ16534 295 aa13.98□□□□□ -0.17
NDUFA3-209ENST00000451517 NPM2Q86SE8 214 aaKnown RBP13.98□□□□□ -0.17
NDUFA3-209ENST00000451517 LNPKQ9C0E8 428 aa13.98□□□□□ -0.17
NDUFA3-209ENST00000451517 CCNL1Q9UK58 526 aaPredicted RBP13.98□□□□□ -0.17
NDUFA3-209ENST00000451517 MYH14Q7Z406 1995 aaKnown RBP13.97□□□□□ -0.17
NDUFA3-209ENST00000451517 SRGAP3O43295 1099 aa13.97□□□□□ -0.17
NDUFA3-209ENST00000451517 UBE3BQ7Z3V4 1068 aa13.97□□□□□ -0.17
NDUFA3-209ENST00000451517 BICC1Q9H694 974 aaKnown RBP13.97□□□□□ -0.17
NDUFA3-209ENST00000451517 CAMTA2O94983 1202 aa13.96□□□□□ -0.17
NDUFA3-209ENST00000451517 KCNQ4P56696 695 aa13.96□□□□□ -0.17
NDUFA3-209ENST00000451517 RABL6Q3YEC7 729 aaPredicted RBP13.96□□□□□ -0.17
NDUFA3-209ENST00000451517 EPHA10Q5JZY3 1008 aa13.96□□□□□ -0.17
NDUFA3-209ENST00000451517 TBC1D2BQ9UPU7 963 aa13.96□□□□□ -0.17
NDUFA3-209ENST00000451517 NOP58Q9Y2X3 529 aaKnown RBP13.96□□□□□ -0.17
NDUFA3-209ENST00000451517 RGL2O15211 777 aa13.95□□□□□ -0.18
NDUFA3-209ENST00000451517 TRIM37O94972 964 aa13.95□□□□□ -0.18
NDUFA3-209ENST00000451517 POTEAQ6S8J7 498 aa13.95□□□□□ -0.18
NDUFA3-209ENST00000451517 NLRP10Q86W26 655 aa13.95□□□□□ -0.18
NDUFA3-209ENST00000451517 JARID2Q92833 1246 aaPredicted RBP13.95□□□□□ -0.18
NDUFA3-209ENST00000451517 ARXQ96QS3 562 aa13.95□□□□□ -0.18
NDUFA3-209ENST00000451517 EXOC6BQ9Y2D4 811 aa13.95□□□□□ -0.18
NDUFA3-209ENST00000451517 ANKRD36CQ5JPF3 1778 aa13.95□□□□□ -0.18
NDUFA3-209ENST00000451517 RAB11FIP3O75154 756 aa13.94□□□□□ -0.18
NDUFA3-209ENST00000451517 RPS6KA4O75676 772 aa13.94□□□□□ -0.18
NDUFA3-209ENST00000451517 PCCAP05165 728 aaPredicted RBP13.94□□□□□ -0.18
NDUFA3-209ENST00000451517 ZNF34Q8IZ26 560 aa13.94□□□□□ -0.18
NDUFA3-209ENST00000451517 TAF1LQ8IZX4 1826 aa13.93□□□□□ -0.18
NDUFA3-209ENST00000451517 SMARCA5O60264 1052 aaPredicted RBP13.93□□□□□ -0.18
NDUFA3-209ENST00000451517 SURF6O75683 361 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms