RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 SLFN5Q08AF3 891 aa13.06□□□□□ -0.32
FN1-211ENST00000443816 NLRP3Q96P20 1036 aa13.06□□□□□ -0.32
FN1-211ENST00000443816 PARP3Q9Y6F1 533 aa13.06□□□□□ -0.32
FN1-211ENST00000443816 ZBTB3Q9H5J0 574 aa13.06□□□□□ -0.32
FN1-211ENST00000443816 ASXL1Q8IXJ9 1541 aa13.06□□□□□ -0.32
FN1-211ENST00000443816 LRRC59Q96AG4 307 aaKnown RBP13.06□□□□□ -0.32
FN1-211ENST00000443816 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
FN1-211ENST00000443816 LRRFIP2Q9Y608 721 aaKnown RBP13.06□□□□□ -0.32
FN1-211ENST00000443816 IFIT3O14879 490 aaKnown RBP13.06□□□□□ -0.32
FN1-211ENST00000443816 SSR1P43307 286 aaKnown RBP13.06□□□□□ -0.32
FN1-211ENST00000443816 EIF5P55010 431 aaKnown RBP13.06□□□□□ -0.32
FN1-211ENST00000443816 CCDC178Q5BJE1 867 aa13.06□□□□□ -0.32
FN1-211ENST00000443816 STXBP4Q6ZWJ1 553 aa13.06□□□□□ -0.32
FN1-211ENST00000443816 GPATCH8Q9UKJ3 1502 aaKnown RBP13.06□□□□□ -0.32
FN1-211ENST00000443816 EVI5LQ96CN4 794 aa13.06□□□□□ -0.32
FN1-211ENST00000443816 TRPM2O94759 1503 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 B4DLN1 442 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 MRPL12P52815 198 aaKnown RBP13.05□□□□□ -0.32
FN1-211ENST00000443816 PLEKHH1Q9ULM0 1364 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 VPS36Q86VN1 386 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 RNF214Q8ND24 703 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 KAT14Q9H8E8 782 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 RALGAPBQ86X10 1494 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 UQCRFS1P1P0C7P4 283 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 NLRP5P59047 1200 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 CHRNA2Q15822 529 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 ZNF804AQ7Z570 1209 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 KIAA1328Q86T90 577 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 C8orf76Q96K31 380 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 CETN1Q12798 172 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 FAM43AQ8N2R8 423 aa13.05□□□□□ -0.32
FN1-211ENST00000443816 SH2B1Q9NRF2 756 aaPredicted RBP13.04□□□□□ -0.32
FN1-211ENST00000443816 TSPY2A6NKD2 308 aa13.04□□□□□ -0.32
FN1-211ENST00000443816 LMOD1P29536 600 aaPredicted RBP13.04□□□□□ -0.32
FN1-211ENST00000443816 ACSBG1Q96GR2 724 aa13.04□□□□□ -0.32
FN1-211ENST00000443816 ANAPC15P60006 121 aa13.04□□□□□ -0.32
FN1-211ENST00000443816 CCDC97Q96F63 343 aaPredicted RBP13.04□□□□□ -0.32
FN1-211ENST00000443816 CCDC194A0A1B0GVG4 234 aa13.04□□□□□ -0.32
FN1-211ENST00000443816 PPM1FP49593 454 aaPredicted RBP13.04□□□□□ -0.32
FN1-211ENST00000443816 HMGN5P82970 282 aaKnown RBP13.04□□□□□ -0.32
FN1-211ENST00000443816 FLIIQ13045 1269 aa13.04□□□□□ -0.32
FN1-211ENST00000443816 C19orf44Q9H6X5 657 aa13.04□□□□□ -0.32
FN1-211ENST00000443816 UHRF1BP1Q6BDS2 1440 aa13.04□□□□□ -0.32
FN1-211ENST00000443816 FKBP15Q5T1M5 1219 aa13.04□□□□□ -0.32
FN1-211ENST00000443816 PYM1Q9BRP8 204 aaKnown RBP13.04□□□□□ -0.32
FN1-211ENST00000443816 THUMPD2Q9BTF0 503 aaKnown RBP13.04□□□□□ -0.32
FN1-211ENST00000443816 ABCA5Q8WWZ7 1642 aa13.04□□□□□ -0.32
FN1-211ENST00000443816 AMPD3Q01432 767 aa13.04□□□□□ -0.32
FN1-211ENST00000443816 CALML4Q96GE6 196 aa13.04□□□□□ -0.32
FN1-211ENST00000443816 MFSD6Q6ZSS7 791 aa13.03□□□□□ -0.32
FN1-211ENST00000443816 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
FN1-211ENST00000443816 UGGT2Q9NYU1 1516 aa13.03□□□□□ -0.32
FN1-211ENST00000443816 ATP10BO94823 1461 aa13.03□□□□□ -0.32
FN1-211ENST00000443816 IL2RBP14784 551 aa13.03□□□□□ -0.32
FN1-211ENST00000443816 ANKRD13DQ6ZTN6 518 aa13.03□□□□□ -0.32
FN1-211ENST00000443816 ANKRD62A6NC57 917 aa13.03□□□□□ -0.32
FN1-211ENST00000443816 UBE3BQ7Z3V4 1068 aa13.03□□□□□ -0.32
FN1-211ENST00000443816 CCDC191Q8NCU4 936 aa13.03□□□□□ -0.32
FN1-211ENST00000443816 SKIDA1Q1XH10 827 aa13.03□□□□□ -0.32
FN1-211ENST00000443816 NUP62CLQ9H1M0 184 aa13.03□□□□□ -0.32
FN1-211ENST00000443816 EZRP15311 586 aaKnown RBP13.02□□□□□ -0.32
FN1-211ENST00000443816 TFCP2L1Q9NZI6 479 aa13.02□□□□□ -0.32
FN1-211ENST00000443816 FERMT2Q96AC1 680 aa13.02□□□□□ -0.32
FN1-211ENST00000443816 SAMM50Q9Y512 469 aa13.02□□□□□ -0.32
FN1-211ENST00000443816 RPRD2Q5VT52 1461 aaKnown RBP13.02□□□□□ -0.32
FN1-211ENST00000443816 KDM5AP29375 1690 aaKnown RBP13.02□□□□□ -0.33
FN1-211ENST00000443816 JDP2Q8WYK2 163 aa13.02□□□□□ -0.33
FN1-211ENST00000443816 UPF3BQ9BZI7 483 aaKnown RBP13.02□□□□□ -0.33
FN1-211ENST00000443816 SPC24Q8NBT2 197 aa13.02□□□□□ -0.33
FN1-211ENST00000443816 DDX11Q96FC9 970 aa13.02□□□□□ -0.33
FN1-211ENST00000443816 MAP7D2Q96T17 732 aa13.02□□□□□ -0.33
FN1-211ENST00000443816 TCP11L1Q9NUJ3 509 aa13.02□□□□□ -0.33
FN1-211ENST00000443816 UBA5Q9GZZ9 404 aa13.02□□□□□ -0.33
FN1-211ENST00000443816 EPB41L2O43491 1005 aaKnown RBP13.01□□□□□ -0.33
FN1-211ENST00000443816 CCDC8Q9H0W5 538 aaPredicted RBP13.01□□□□□ -0.33
FN1-211ENST00000443816 NFKBIBQ15653 356 aa13.01□□□□□ -0.33
FN1-211ENST00000443816 ENOX2Q16206 610 aaKnown RBP13.01□□□□□ -0.33
FN1-211ENST00000443816 TPTE2Q6XPS3 522 aa13.01□□□□□ -0.33
FN1-211ENST00000443816 TMEM67Q5HYA8 995 aa13.01□□□□□ -0.33
FN1-211ENST00000443816 SSH1Q8WYL5 1049 aa13.01□□□□□ -0.33
FN1-211ENST00000443816 GOLGA8BA8MQT2 603 aa13□□□□□ -0.33
FN1-211ENST00000443816 TAF4BQ92750 862 aa13□□□□□ -0.33
FN1-211ENST00000443816 TSPY3P0CV98 308 aa13□□□□□ -0.33
FN1-211ENST00000443816 TSPY8P0CW00 308 aa13□□□□□ -0.33
FN1-211ENST00000443816 UTP14AQ9BVJ6 771 aaKnown RBP13□□□□□ -0.33
FN1-211ENST00000443816 CWC15Q9P013 229 aaKnown RBP13□□□□□ -0.33
FN1-211ENST00000443816 VTI1AQ96AJ9 217 aa13□□□□□ -0.33
FN1-211ENST00000443816 ATP5J2-PTCD1G3V325 749 aa13□□□□□ -0.33
FN1-211ENST00000443816 CACNA2D4Q7Z3S7 1137 aa13□□□□□ -0.33
FN1-211ENST00000443816 CDCA7Q9BWT1 371 aaPredicted RBP13□□□□□ -0.33
FN1-211ENST00000443816 LRRC27Q9C0I9 530 aa13□□□□□ -0.33
FN1-211ENST00000443816 NIP7Q9Y221 180 aaKnown RBP eCLIP13□□□□□ -0.333e-24■□□□□ 11.2
FN1-211ENST00000443816 GOLIM4O00461 696 aa13□□□□□ -0.33
FN1-211ENST00000443816 AKAP4Q5JQC9 854 aa13□□□□□ -0.33
FN1-211ENST00000443816 ZC3H12CQ9C0D7 883 aaKnown RBP13□□□□□ -0.33
FN1-211ENST00000443816 GOLGA8AA7E2F4 631 aa12.99□□□□□ -0.33
FN1-211ENST00000443816 PLCG2P16885 1265 aa12.99□□□□□ -0.33
FN1-211ENST00000443816 MAST1Q9Y2H9 1570 aa12.99□□□□□ -0.33
FN1-211ENST00000443816 F6X3S4 739 aa12.99□□□□□ -0.33
FN1-211ENST00000443816 ZFYP08048 801 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms