RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 SAMD1Q6SPF0 538 aaPredicted RBP10.37□□□□□ -0.75
CCDC113-202ENST00000443128 PLEKHF1Q96S99 279 aa10.37□□□□□ -0.75
CCDC113-202ENST00000443128 PPP1R1BQ9UD71 204 aaPredicted RBP10.37□□□□□ -0.75
CCDC113-202ENST00000443128 CIZ1Q9ULV3 898 aaPredicted RBP10.37□□□□□ -0.75
CCDC113-202ENST00000443128 PES1O00541 588 aaKnown RBP10.37□□□□□ -0.75
CCDC113-202ENST00000443128 LMBR1LQ6UX01 489 aa10.37□□□□□ -0.75
CCDC113-202ENST00000443128 TBC1D32Q96NH3 1257 aa10.37□□□□□ -0.75
CCDC113-202ENST00000443128 USP6P35125 1406 aa10.37□□□□□ -0.75
CCDC113-202ENST00000443128 SLC5A1P13866 664 aa10.37□□□□□ -0.75
CCDC113-202ENST00000443128 CEBPZQ03701 1054 aaKnown RBP10.37□□□□□ -0.75
CCDC113-202ENST00000443128 SMC5Q8IY18 1101 aa10.37□□□□□ -0.75
CCDC113-202ENST00000443128 PA2G4Q9UQ80 394 aaKnown RBP10.37□□□□□ -0.75
CCDC113-202ENST00000443128 CTDP1Q9Y5B0 961 aaPredicted RBP10.37□□□□□ -0.75
CCDC113-202ENST00000443128 RNF123Q5XPI4 1314 aa10.37□□□□□ -0.75
CCDC113-202ENST00000443128 GOLIM4O00461 696 aa10.36□□□□□ -0.75
CCDC113-202ENST00000443128 DDX21Q9NR30 783 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCDC113-202ENST00000443128 BCORL1Q5H9F3 1711 aa10.36□□□□□ -0.75
CCDC113-202ENST00000443128 CCDC69A6NI79 296 aa10.36□□□□□ -0.75
CCDC113-202ENST00000443128 ATP2B1P20020 1258 aa10.36□□□□□ -0.75
CCDC113-202ENST00000443128 HOOK1Q9UJC3 728 aaKnown RBP10.36□□□□□ -0.75
CCDC113-202ENST00000443128 U3KPZ7 1027 aaPredicted RBP10.36□□□□□ -0.75
CCDC113-202ENST00000443128 MADDQ8WXG6 1647 aa10.36□□□□□ -0.75
CCDC113-202ENST00000443128 C8orf34Q49A92 452 aa10.36□□□□□ -0.75
CCDC113-202ENST00000443128 AK7Q96M32 723 aa10.36□□□□□ -0.75
CCDC113-202ENST00000443128 SNRKQ9NRH2 765 aa10.36□□□□□ -0.75
CCDC113-202ENST00000443128 ADGRB3O60242 1522 aa10.36□□□□□ -0.75
CCDC113-202ENST00000443128 HMGB2P26583 209 aaKnown RBP10.35□□□□□ -0.75
CCDC113-202ENST00000443128 LMTK2Q8IWU2 1503 aa10.35□□□□□ -0.75
CCDC113-202ENST00000443128 NUP133Q8WUM0 1156 aa10.35□□□□□ -0.75
CCDC113-202ENST00000443128 SLC52A2Q9HAB3 445 aa10.35□□□□□ -0.75
CCDC113-202ENST00000443128 ANKIB1Q9P2G1 1089 aa10.35□□□□□ -0.75
CCDC113-202ENST00000443128 GLI2P10070 1586 aa10.35□□□□□ -0.75
CCDC113-202ENST00000443128 RNF214Q8ND24 703 aa10.35□□□□□ -0.75
CCDC113-202ENST00000443128 SDF4Q9BRK5 362 aa10.35□□□□□ -0.75
CCDC113-202ENST00000443128 HOXB7P09629 217 aa10.34□□□□□ -0.75
CCDC113-202ENST00000443128 MAP3K12Q12852 859 aa10.34□□□□□ -0.75
CCDC113-202ENST00000443128 CCDC83Q8IWF9 413 aa10.34□□□□□ -0.75
CCDC113-202ENST00000443128 USP19O94966 1318 aa10.34□□□□□ -0.75
CCDC113-202ENST00000443128 MCM4P33991 863 aa10.34□□□□□ -0.75
CCDC113-202ENST00000443128 TRIM22Q8IYM9 498 aa10.34□□□□□ -0.75
CCDC113-202ENST00000443128 UBAC1Q9BSL1 405 aa10.34□□□□□ -0.75
CCDC113-202ENST00000443128 FRMPD1Q5SYB0 1578 aa10.34□□□□□ -0.75
CCDC113-202ENST00000443128 SMARCC1Q92922 1105 aaPredicted RBP10.34□□□□□ -0.75
CCDC113-202ENST00000443128 ZNF396Q96N95 335 aaPredicted RBP10.34□□□□□ -0.75
CCDC113-202ENST00000443128 CDC5LQ99459 802 aaKnown RBP10.34□□□□□ -0.75
CCDC113-202ENST00000443128 IKQ13123 557 aaPredicted RBP10.34□□□□□ -0.75
CCDC113-202ENST00000443128 IL17REQ8NFR9 667 aa10.34□□□□□ -0.75
CCDC113-202ENST00000443128 ALKQ9UM73 1620 aa10.34□□□□□ -0.75
CCDC113-202ENST00000443128 DZIP3Q86Y13 1208 aaKnown RBP10.33□□□□□ -0.76
CCDC113-202ENST00000443128 RFC4P35249 363 aa10.33□□□□□ -0.76
CCDC113-202ENST00000443128 MRE11P49959 708 aa10.33□□□□□ -0.76
CCDC113-202ENST00000443128 STK38Q15208 465 aa10.33□□□□□ -0.76
CCDC113-202ENST00000443128 DDX46Q7L014 1031 aaKnown RBP10.33□□□□□ -0.76
CCDC113-202ENST00000443128 DDX11Q96FC9 970 aa10.33□□□□□ -0.76
CCDC113-202ENST00000443128 RBM5P52756 815 aaKnown RBP eCLIP10.33□□□□□ -0.76
CCDC113-202ENST00000443128 KRT85P78386 507 aa10.33□□□□□ -0.76
CCDC113-202ENST00000443128 EIF4A1P60842 406 aaKnown RBP10.33□□□□□ -0.76
CCDC113-202ENST00000443128 RPGRQ92834 1020 aaKnown RBP10.33□□□□□ -0.76
CCDC113-202ENST00000443128 NAPBQ9H115 298 aa10.33□□□□□ -0.76
CCDC113-202ENST00000443128 CAMSAP1Q5T5Y3 1602 aa10.33□□□□□ -0.76
CCDC113-202ENST00000443128 NASPP49321 788 aaPredicted RBP10.32□□□□□ -0.76
CCDC113-202ENST00000443128 ATP2B2Q01814 1243 aa10.32□□□□□ -0.76
CCDC113-202ENST00000443128 BICC1Q9H694 974 aaKnown RBP10.32□□□□□ -0.76
CCDC113-202ENST00000443128 KIAA0232Q92628 1395 aa10.32□□□□□ -0.76
CCDC113-202ENST00000443128 KINO60870 393 aaKnown RBP10.32□□□□□ -0.76
CCDC113-202ENST00000443128 CCDC47Q96A33 483 aaKnown RBP10.32□□□□□ -0.76
CCDC113-202ENST00000443128 LARP6Q9BRS8 491 aaKnown RBP10.32□□□□□ -0.76
CCDC113-202ENST00000443128 CCDC152Q4G0S7 254 aa10.32□□□□□ -0.76
CCDC113-202ENST00000443128 NBPF5PQ86XG9 351 aaPredicted RBP10.32□□□□□ -0.76
CCDC113-202ENST00000443128 PLEKHM2Q8IWE5 1019 aa10.32□□□□□ -0.76
CCDC113-202ENST00000443128 MINDY4BA8MYZ0 360 aa10.32□□□□□ -0.76
CCDC113-202ENST00000443128 TCEAL9Q9UHQ7 104 aa10.32□□□□□ -0.76
CCDC113-202ENST00000443128 NIP7Q9Y221 180 aaKnown RBP eCLIP10.32□□□□□ -0.76
CCDC113-202ENST00000443128 KDM2BQ8NHM5 1336 aa10.32□□□□□ -0.76
CCDC113-202ENST00000443128 CDKL5O76039 1030 aa10.31□□□□□ -0.76
CCDC113-202ENST00000443128 IL15P40933 162 aaPredicted RBP10.31□□□□□ -0.76
CCDC113-202ENST00000443128 ZNF521Q96K83 1311 aa10.31□□□□□ -0.76
CCDC113-202ENST00000443128 TRMT2AQ8IZ69 625 aaKnown RBP10.31□□□□□ -0.76
CCDC113-202ENST00000443128 ZNF213O14771 459 aa10.31□□□□□ -0.76
CCDC113-202ENST00000443128 ZNF496Q96IT1 587 aaPredicted RBP10.31□□□□□ -0.76
CCDC113-202ENST00000443128 ESYT1Q9BSJ8 1104 aa10.31□□□□□ -0.76
CCDC113-202ENST00000443128 LIMCH1Q9UPQ0 1083 aa10.31□□□□□ -0.76
CCDC113-202ENST00000443128 LETM1O95202 739 aaPredicted RBP10.31□□□□□ -0.76
CCDC113-202ENST00000443128 TTF1Q15361 905 aaPredicted RBP10.31□□□□□ -0.76
CCDC113-202ENST00000443128 DZIP1Q86YF9 867 aaKnown RBP10.31□□□□□ -0.76
CCDC113-202ENST00000443128 AGLP35573 1532 aa10.31□□□□□ -0.76
CCDC113-202ENST00000443128 IGSF1Q8N6C5 1336 aa10.31□□□□□ -0.76
CCDC113-202ENST00000443128 KCNQ3O43525 872 aa10.3□□□□□ -0.76
CCDC113-202ENST00000443128 ME1P48163 572 aa10.3□□□□□ -0.76
CCDC113-202ENST00000443128 ATP2B3Q16720 1220 aa10.3□□□□□ -0.76
CCDC113-202ENST00000443128 ARHGEF25Q86VW2 580 aa10.3□□□□□ -0.76
CCDC113-202ENST00000443128 SH2B1Q9NRF2 756 aaPredicted RBP10.3□□□□□ -0.76
CCDC113-202ENST00000443128 HMGB1P09429 215 aaKnown RBP10.3□□□□□ -0.76
CCDC113-202ENST00000443128 FERMT3Q86UX7 667 aa10.3□□□□□ -0.76
CCDC113-202ENST00000443128 METTL22Q9BUU2 404 aaPredicted RBP10.3□□□□□ -0.76
CCDC113-202ENST00000443128 TPM3P06753 285 aa10.3□□□□□ -0.76
CCDC113-202ENST00000443128 PLBD2Q8NHP8 589 aa10.3□□□□□ -0.76
CCDC113-202ENST00000443128 SETDB2Q96T68 719 aa10.3□□□□□ -0.76
CCDC113-202ENST00000443128 TPM2P07951 284 aa10.29□□□□□ -0.76
CCDC113-202ENST00000443128 PHKG2P15735 406 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms