RNA–Protein interactions for RNA: ENST00000442742.6

CASK-208, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

TSL 1 (best) BASIC

Gene CASK, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-208ENST00000442742 LRP10Q7Z4F1 713 aa11.59□□□□□ -0.55
CASK-208ENST00000442742 DNAJC10Q8IXB1 793 aa11.59□□□□□ -0.55
CASK-208ENST00000442742 PXDNLA1KZ92 1463 aa11.58□□□□□ -0.56
CASK-208ENST00000442742 CCDC85AQ96PX6 553 aaPredicted RBP11.58□□□□□ -0.56
CASK-208ENST00000442742 PRIM1P49642 420 aaKnown RBP11.58□□□□□ -0.56
CASK-208ENST00000442742 CASC1Q6TDU7 716 aa11.58□□□□□ -0.56
CASK-208ENST00000442742 CCDC8Q9H0W5 538 aaPredicted RBP11.58□□□□□ -0.56
CASK-208ENST00000442742 NHSL1Q5SYE7 1610 aa11.57□□□□□ -0.56
CASK-208ENST00000442742 ABCA3Q99758 1704 aa11.57□□□□□ -0.56
CASK-208ENST00000442742 UBAP1LF5GYI3 381 aa11.57□□□□□ -0.56
CASK-208ENST00000442742 KIF1BPQ96EK5 621 aa11.57□□□□□ -0.56
CASK-208ENST00000442742 FRAT2O75474 233 aaPredicted RBP11.57□□□□□ -0.56
CASK-208ENST00000442742 NFKBIBQ15653 356 aa11.57□□□□□ -0.56
CASK-208ENST00000442742 KIF2CQ99661 725 aa11.57□□□□□ -0.56
CASK-208ENST00000442742 PKD1L3Q7Z443 1732 aa11.57□□□□□ -0.56
CASK-208ENST00000442742 GOLGB1Q14789 3259 aaKnown RBP11.57□□□□□ -0.56
CASK-208ENST00000442742 G3BP1Q13283 466 aaKnown RBP eCLIP11.56□□□□□ -0.56
CASK-208ENST00000442742 NKX1-1Q15270 411 aaPredicted RBP11.56□□□□□ -0.56
CASK-208ENST00000442742 ADAMTS7Q9UKP4 1686 aa11.56□□□□□ -0.56
CASK-208ENST00000442742 RBM25P49756 843 aaKnown RBP11.56□□□□□ -0.56
CASK-208ENST00000442742 AACSQ86V21 672 aa11.56□□□□□ -0.56
CASK-208ENST00000442742 HSCBQ8IWL3 235 aa11.56□□□□□ -0.56
CASK-208ENST00000442742 CLASRPQ8N2M8 674 aaKnown RBP11.56□□□□□ -0.56
CASK-208ENST00000442742 ATG3Q9NT62 314 aa11.56□□□□□ -0.56
CASK-208ENST00000442742 HSP90AA1P07900 732 aaKnown RBP11.55□□□□□ -0.56
CASK-208ENST00000442742 PLBD2Q8NHP8 589 aa11.55□□□□□ -0.56
CASK-208ENST00000442742 C8orf37Q96NL8 207 aa11.55□□□□□ -0.56
CASK-208ENST00000442742 ANO2Q9NQ90 1003 aa11.55□□□□□ -0.56
CASK-208ENST00000442742 SALL3Q9BXA9 1300 aa11.55□□□□□ -0.56
CASK-208ENST00000442742 RAB11FIP3O75154 756 aa11.55□□□□□ -0.56
CASK-208ENST00000442742 IFIT2P09913 472 aaKnown RBP11.55□□□□□ -0.56
CASK-208ENST00000442742 USP26Q9BXU7 913 aa11.55□□□□□ -0.56
CASK-208ENST00000442742 IL25Q9H293 177 aa11.55□□□□□ -0.56
CASK-208ENST00000442742 PARP4Q9UKK3 1724 aaKnown RBP11.55□□□□□ -0.56
CASK-208ENST00000442742 TOM1O60784 492 aa11.55□□□□□ -0.56
CASK-208ENST00000442742 SASH1O94885 1247 aa11.55□□□□□ -0.56
CASK-208ENST00000442742 LMBR1LQ6UX01 489 aa11.55□□□□□ -0.56
CASK-208ENST00000442742 OSBPL3Q9H4L5 887 aa11.55□□□□□ -0.56
CASK-208ENST00000442742 TLR7Q9NYK1 1049 aaKnown RBP11.55□□□□□ -0.56
CASK-208ENST00000442742 GPTP24298 496 aa11.54□□□□□ -0.56
CASK-208ENST00000442742 DDB1Q16531 1140 aa11.54□□□□□ -0.56
CASK-208ENST00000442742 NDUFB9Q9Y6M9 179 aa11.54□□□□□ -0.56
CASK-208ENST00000442742 KCNQ4P56696 695 aa11.54□□□□□ -0.56
CASK-208ENST00000442742 FAM182BQ5T319 152 aa11.54□□□□□ -0.56
CASK-208ENST00000442742 NOL8Q76FK4 1167 aaKnown RBP11.54□□□□□ -0.56
CASK-208ENST00000442742 SYNE4Q8N205 404 aa11.54□□□□□ -0.56
CASK-208ENST00000442742 FAM177BA6PVY3 158 aa11.53□□□□□ -0.56
CASK-208ENST00000442742 ERC2O15083 957 aa11.53□□□□□ -0.56
CASK-208ENST00000442742 HSP90AB4PQ58FF6 505 aa11.53□□□□□ -0.56
CASK-208ENST00000442742 CWC27Q6UX04 472 aaKnown RBP11.53□□□□□ -0.56
CASK-208ENST00000442742 EAF2Q96CJ1 260 aaPredicted RBP11.53□□□□□ -0.56
CASK-208ENST00000442742 NGLY1Q96IV0 654 aa11.53□□□□□ -0.56
CASK-208ENST00000442742 SLC4A9Q96Q91 983 aa11.53□□□□□ -0.56
CASK-208ENST00000442742 ABCC6O95255 1503 aa11.53□□□□□ -0.56
CASK-208ENST00000442742 CHMLP26374 656 aa11.53□□□□□ -0.56
CASK-208ENST00000442742 PI4K2BQ8TCG2 481 aa11.53□□□□□ -0.56
CASK-208ENST00000442742 FAM89AQ96GI7 184 aa11.53□□□□□ -0.56
CASK-208ENST00000442742 TBC1D2BQ9UPU7 963 aa11.53□□□□□ -0.56
CASK-208ENST00000442742 MRC1P22897 1456 aa11.52□□□□□ -0.56
CASK-208ENST00000442742 MTX1Q13505 466 aa11.52□□□□□ -0.56
CASK-208ENST00000442742 FAM98CQ17RN3 349 aaKnown RBP11.52□□□□□ -0.56
CASK-208ENST00000442742 ZNF594Q96JF6 807 aaPredicted RBP11.52□□□□□ -0.56
CASK-208ENST00000442742 REC8O95072 547 aa11.52□□□□□ -0.57
CASK-208ENST00000442742 BOLA2Q9H3K6 86 aa11.52□□□□□ -0.57
CASK-208ENST00000442742 STAP2Q9UGK3 403 aa11.52□□□□□ -0.57
CASK-208ENST00000442742 HDAC5Q9UQL6 1122 aa11.52□□□□□ -0.57
CASK-208ENST00000442742 KCNQ2O43526 872 aa11.51□□□□□ -0.57
CASK-208ENST00000442742 EDC3Q96F86 508 aaKnown RBP11.51□□□□□ -0.57
CASK-208ENST00000442742 ESYT1Q9BSJ8 1104 aa11.51□□□□□ -0.57
CASK-208ENST00000442742 CWC25Q9NXE8 425 aaPredicted RBP11.51□□□□□ -0.57
CASK-208ENST00000442742 STARD3NLO95772 234 aa11.51□□□□□ -0.57
CASK-208ENST00000442742 TFCP2Q12800 502 aa11.51□□□□□ -0.57
CASK-208ENST00000442742 HLFQ16534 295 aa11.51□□□□□ -0.57
CASK-208ENST00000442742 ZBTB1Q9Y2K1 713 aa11.51□□□□□ -0.57
CASK-208ENST00000442742 SHANK3Q9BYB0 1731 aa11.51□□□□□ -0.57
CASK-208ENST00000442742 UTYO14607 1347 aa11.5□□□□□ -0.57
CASK-208ENST00000442742 LTBP4Q8N2S1 1624 aa11.5□□□□□ -0.57
CASK-208ENST00000442742 SPATA31A1Q5TZJ5 1347 aa11.5□□□□□ -0.57
CASK-208ENST00000442742 PTPN12Q05209 780 aaKnown RBP11.5□□□□□ -0.57
CASK-208ENST00000442742 MARCH10Q8NA82 808 aaPredicted RBP11.5□□□□□ -0.57
CASK-208ENST00000442742 PALD1Q9ULE6 856 aa11.5□□□□□ -0.57
CASK-208ENST00000442742 AFDNP55196 1824 aaKnown RBP11.5□□□□□ -0.57
CASK-208ENST00000442742 N4BP2Q86UW6 1770 aaPredicted RBP11.5□□□□□ -0.57
CASK-208ENST00000442742 PHLPP1O60346 1717 aa11.5□□□□□ -0.57
CASK-208ENST00000442742 TOGARAM1Q9Y4F4 1720 aa11.5□□□□□ -0.57
CASK-208ENST00000442742 NEUROD6Q96NK8 337 aa11.5□□□□□ -0.57
CASK-208ENST00000442742 ANTXR1Q9H6X2 564 aa11.5□□□□□ -0.57
CASK-208ENST00000442742 ECHDC1Q9NTX5 307 aa11.5□□□□□ -0.57
CASK-208ENST00000442742 KCPQ6ZWJ8 1503 aa11.49□□□□□ -0.57
CASK-208ENST00000442742 SMIM5Q71RC9 77 aa11.49□□□□□ -0.57
CASK-208ENST00000442742 UPF3BQ9BZI7 483 aaKnown RBP11.49□□□□□ -0.57
CASK-208ENST00000442742 KIF6Q6ZMV9 814 aa11.49□□□□□ -0.57
CASK-208ENST00000442742 ERC1Q8IUD2 1116 aa11.49□□□□□ -0.57
CASK-208ENST00000442742 CNTROBQ8N137 903 aa11.49□□□□□ -0.57
CASK-208ENST00000442742 CHGBP05060 677 aa11.48□□□□□ -0.57
CASK-208ENST00000442742 ATP6V1AP38606 617 aa11.48□□□□□ -0.57
CASK-208ENST00000442742 NEK4P51957 841 aa11.48□□□□□ -0.57
CASK-208ENST00000442742 GLRX3O76003 335 aaKnown RBP11.48□□□□□ -0.57
CASK-208ENST00000442742 DEKP35659 375 aaKnown RBP11.48□□□□□ -0.57
CASK-208ENST00000442742 TIMM10P62072 90 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms