RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 NBPF5PQ86XG9 351 aaPredicted RBP15.41■□□□□ 0.06
UBE2D4-204ENST00000440899 NBPF15Q8N660 670 aa15.41■□□□□ 0.06
UBE2D4-204ENST00000440899 DNAJC5GQ8N7S2 189 aa15.41■□□□□ 0.06
UBE2D4-204ENST00000440899 PNISRQ8TF01 805 aaKnown RBP15.41■□□□□ 0.06
UBE2D4-204ENST00000440899 PNNQ9H307 717 aaKnown RBP15.41■□□□□ 0.06
UBE2D4-204ENST00000440899 MIS18AQ9NYP9 233 aa15.41■□□□□ 0.06
UBE2D4-204ENST00000440899 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
UBE2D4-204ENST00000440899 MASTLQ96GX5 879 aa15.4■□□□□ 0.06
UBE2D4-204ENST00000440899 PLEKHF1Q96S99 279 aa15.4■□□□□ 0.06
UBE2D4-204ENST00000440899 NFE2L2Q16236 605 aa15.39■□□□□ 0.05
UBE2D4-204ENST00000440899 SOGA3Q5TF21 947 aa15.39■□□□□ 0.05
UBE2D4-204ENST00000440899 DPY19L2Q6NUT2 758 aa15.39■□□□□ 0.05
UBE2D4-204ENST00000440899 TPTE2Q6XPS3 522 aa15.39■□□□□ 0.05
UBE2D4-204ENST00000440899 ANKRD31Q8N7Z5 1873 aa15.39■□□□□ 0.05
UBE2D4-204ENST00000440899 PRPF40BQ6NWY9 871 aaKnown RBP15.38■□□□□ 0.05
UBE2D4-204ENST00000440899 SMC1BQ8NDV3 1235 aa15.38■□□□□ 0.05
UBE2D4-204ENST00000440899 NIP7Q9Y221 180 aaKnown RBP eCLIP15.38■□□□□ 0.05
UBE2D4-204ENST00000440899 LTBP3Q9NS15 1303 aa15.38■□□□□ 0.05
UBE2D4-204ENST00000440899 KLRG2A4D1S0 409 aaPredicted RBP15.37■□□□□ 0.05
UBE2D4-204ENST00000440899 EIF4A1P60842 406 aaKnown RBP15.37■□□□□ 0.05
UBE2D4-204ENST00000440899 ERFEQ4G0M1 354 aa15.37■□□□□ 0.05
UBE2D4-204ENST00000440899 TNRC6CQ9HCJ0 1690 aaKnown RBP15.37■□□□□ 0.05
UBE2D4-204ENST00000440899 MAPK8IP3Q9UPT6 1336 aa15.37■□□□□ 0.05
UBE2D4-204ENST00000440899 BCORQ6W2J9 1755 aa15.36■□□□□ 0.05
UBE2D4-204ENST00000440899 NPR1P16066 1061 aa15.36■□□□□ 0.05
UBE2D4-204ENST00000440899 TAOK3Q9H2K8 898 aa15.36■□□□□ 0.05
UBE2D4-204ENST00000440899 ERVV-1B6SEH8 477 aa15.35■□□□□ 0.05
UBE2D4-204ENST00000440899 HLFQ16534 295 aa15.35■□□□□ 0.05
UBE2D4-204ENST00000440899 IFFO2Q5TF58 517 aa15.35■□□□□ 0.05
UBE2D4-204ENST00000440899 COL11A2P13942 1736 aaPredicted RBP15.34■□□□□ 0.05
UBE2D4-204ENST00000440899 FAM177BA6PVY3 158 aa15.34■□□□□ 0.05
UBE2D4-204ENST00000440899 GTF2E1P29083 439 aaPredicted RBP15.34■□□□□ 0.05
UBE2D4-204ENST00000440899 RALBP1Q15311 655 aa15.34■□□□□ 0.05
UBE2D4-204ENST00000440899 NGEFQ8N5V2 710 aa15.34■□□□□ 0.05
UBE2D4-204ENST00000440899 C7orf43Q8WVR3 580 aa15.34■□□□□ 0.05
UBE2D4-204ENST00000440899 THUMPD2Q9BTF0 503 aaKnown RBP15.34■□□□□ 0.05
UBE2D4-204ENST00000440899 RRP7AQ9Y3A4 280 aaKnown RBP15.34■□□□□ 0.05
UBE2D4-204ENST00000440899 POTECB2RU33 542 aa15.33■□□□□ 0.04
UBE2D4-204ENST00000440899 HTRA3P83110 453 aa15.33■□□□□ 0.04
UBE2D4-204ENST00000440899 CCDC93Q567U6 631 aa15.33■□□□□ 0.04
UBE2D4-204ENST00000440899 KLRG1Q96E93 195 aa15.33■□□□□ 0.04
UBE2D4-204ENST00000440899 NYXQ9GZU5 481 aa15.33■□□□□ 0.04
UBE2D4-204ENST00000440899 SLX4Q8IY92 1834 aa15.33■□□□□ 0.04
UBE2D4-204ENST00000440899 FER1L6Q2WGJ9 1857 aa15.33■□□□□ 0.04
UBE2D4-204ENST00000440899 CCDC88AQ3V6T2 1871 aa15.33■□□□□ 0.04
UBE2D4-204ENST00000440899 ALDH1B1P30837 517 aa15.32■□□□□ 0.04
UBE2D4-204ENST00000440899 KIF6Q6ZMV9 814 aa15.32■□□□□ 0.04
UBE2D4-204ENST00000440899 MAP3K15Q6ZN16 1313 aa15.32■□□□□ 0.04
UBE2D4-204ENST00000440899 PCNTO95613 3336 aa15.32■□□□□ 0.04
UBE2D4-204ENST00000440899 MYL6BP14649 208 aa15.31■□□□□ 0.04
UBE2D4-204ENST00000440899 RIPK4P57078 832 aa15.31■□□□□ 0.04
UBE2D4-204ENST00000440899 TTLL7Q6ZT98 887 aa15.31■□□□□ 0.04
UBE2D4-204ENST00000440899 RTKN2Q8IZC4 609 aa15.31■□□□□ 0.04
UBE2D4-204ENST00000440899 TIAM2Q8IVF5 1701 aa15.31■□□□□ 0.04
UBE2D4-204ENST00000440899 WDR90Q96KV7 1748 aa15.31■□□□□ 0.04
UBE2D4-204ENST00000440899 FKBP4Q02790 459 aaKnown RBP eCLIP15.3■□□□□ 0.04
UBE2D4-204ENST00000440899 ERBB4Q15303 1308 aa15.3■□□□□ 0.04
UBE2D4-204ENST00000440899 JMYQ8N9B5 988 aa15.3■□□□□ 0.04
UBE2D4-204ENST00000440899 DLG5Q8TDM6 1919 aa15.3■□□□□ 0.04
UBE2D4-204ENST00000440899 BABAM1Q9NWV8 329 aa15.3■□□□□ 0.04
UBE2D4-204ENST00000440899 TSPYL4Q9UJ04 414 aa15.3■□□□□ 0.04
UBE2D4-204ENST00000440899 KDM3BQ7LBC6 1761 aa15.29■□□□□ 0.04
UBE2D4-204ENST00000440899 DDNO94850 711 aaPredicted RBP15.29■□□□□ 0.04
UBE2D4-204ENST00000440899 DICER1Q9UPY3 1922 aaKnown RBP15.29■□□□□ 0.04
UBE2D4-204ENST00000440899 LAMB4A4D0S4 1761 aa15.29■□□□□ 0.04
UBE2D4-204ENST00000440899 TMPOP42166 694 aaKnown RBP15.28■□□□□ 0.04
UBE2D4-204ENST00000440899 LMOD3Q0VAK6 560 aa15.28■□□□□ 0.04
UBE2D4-204ENST00000440899 CRY2Q49AN0 593 aa15.28■□□□□ 0.04
UBE2D4-204ENST00000440899 NUTM1Q86Y26 1132 aa15.28■□□□□ 0.04
UBE2D4-204ENST00000440899 ZBTB3Q9H5J0 574 aa15.28■□□□□ 0.04
UBE2D4-204ENST00000440899 ARFGEF2Q9Y6D5 1785 aa15.28■□□□□ 0.04
UBE2D4-204ENST00000440899 IBTKQ9P2D0 1353 aaPredicted RBP15.27■□□□□ 0.04
UBE2D4-204ENST00000440899 GPTP24298 496 aa15.27■□□□□ 0.04
UBE2D4-204ENST00000440899 DDX10Q13206 875 aaKnown RBP15.27■□□□□ 0.04
UBE2D4-204ENST00000440899 OLFM4Q6UX06 510 aa15.27■□□□□ 0.04
UBE2D4-204ENST00000440899 GIGYF2Q6Y7W6 1299 aaKnown RBP15.27■□□□□ 0.04
UBE2D4-204ENST00000440899 ZNF34Q8IZ26 560 aa15.27■□□□□ 0.04
UBE2D4-204ENST00000440899 ZNF277Q9NRM2 450 aaPredicted RBP15.27■□□□□ 0.04
UBE2D4-204ENST00000440899 ABCC12Q96J65 1359 aa15.26■□□□□ 0.03
UBE2D4-204ENST00000440899 IQCA1LA6NCM1 817 aa15.26■□□□□ 0.03
UBE2D4-204ENST00000440899 EIF2S2P20042 333 aaKnown RBP15.26■□□□□ 0.03
UBE2D4-204ENST00000440899 HOXA10P31260 410 aaPredicted RBP15.26■□□□□ 0.03
UBE2D4-204ENST00000440899 SUSD4Q5VX71 490 aa15.26■□□□□ 0.03
UBE2D4-204ENST00000440899 CC2D2BQ6DHV5 1058 aa15.26■□□□□ 0.03
UBE2D4-204ENST00000440899 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
UBE2D4-204ENST00000440899 SYNE4Q8N205 404 aa15.26■□□□□ 0.03
UBE2D4-204ENST00000440899 L3MBTL3Q96JM7 780 aaPredicted RBP15.26■□□□□ 0.03
UBE2D4-204ENST00000440899 CACNA1SQ13698 1873 aa15.25■□□□□ 0.03
UBE2D4-204ENST00000440899 UBN2Q6ZU65 1347 aa15.25■□□□□ 0.03
UBE2D4-204ENST00000440899 MYBBP1AQ9BQG0 1328 aaKnown RBP15.25■□□□□ 0.03
UBE2D4-204ENST00000440899 PDIA6Q15084 440 aa15.25■□□□□ 0.03
UBE2D4-204ENST00000440899 PARP10Q53GL7 1025 aa15.25■□□□□ 0.03
UBE2D4-204ENST00000440899 PPP1R42Q7Z4L9 355 aa15.25■□□□□ 0.03
UBE2D4-204ENST00000440899 RPGRQ92834 1020 aaKnown RBP15.25■□□□□ 0.03
UBE2D4-204ENST00000440899 RIC1Q4ADV7 1423 aa15.25■□□□□ 0.03
UBE2D4-204ENST00000440899 NTSR2O95665 410 aa15.24■□□□□ 0.03
UBE2D4-204ENST00000440899 IARSP41252 1262 aaKnown RBP15.24■□□□□ 0.03
UBE2D4-204ENST00000440899 GRIPAP1Q4V328 841 aa15.24■□□□□ 0.03
UBE2D4-204ENST00000440899 LRP10Q7Z4F1 713 aa15.24■□□□□ 0.03
UBE2D4-204ENST00000440899 RBM17Q96I25 401 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms