RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 LOC102724428A0A0B4J2F2 783 aa23.89■■□□□ 1.41
SNX17-203ENST00000440760 SIK1P57059 783 aa23.89■■□□□ 1.41
SNX17-203ENST00000440760 PLBD2Q8NHP8 589 aa23.89■■□□□ 1.41
SNX17-203ENST00000440760 ZBTB3Q9H5J0 574 aa23.89■■□□□ 1.41
SNX17-203ENST00000440760 ZBTB1Q9Y2K1 713 aa23.89■■□□□ 1.41
SNX17-203ENST00000440760 CICQ96RK0 1608 aaPredicted RBP23.88■■□□□ 1.41
SNX17-203ENST00000440760 EP400Q96L91 3159 aa23.88■■□□□ 1.41
SNX17-203ENST00000440760 NEURL1BA8MQ27 555 aa23.87■■□□□ 1.41
SNX17-203ENST00000440760 ATP6V1AP38606 617 aa23.87■■□□□ 1.41
SNX17-203ENST00000440760 NEXNQ0ZGT2 675 aa23.87■■□□□ 1.41
SNX17-203ENST00000440760 PNMA6EA0A0J9YXQ4 647 aa23.87■■□□□ 1.41
SNX17-203ENST00000440760 ITPK1Q13572 414 aa23.87■■□□□ 1.41
SNX17-203ENST00000440760 C9orf78Q9NZ63 289 aaPredicted RBP23.87■■□□□ 1.41
SNX17-203ENST00000440760 ATP5J2-PTCD1G3V325 749 aa23.86■■□□□ 1.41
SNX17-203ENST00000440760 GCC1Q96CN9 775 aa23.86■■□□□ 1.41
SNX17-203ENST00000440760 COL5A3P25940 1745 aaPredicted RBP23.86■■□□□ 1.41
SNX17-203ENST00000440760 PDE4AP27815 886 aa23.85■■□□□ 1.41
SNX17-203ENST00000440760 MYH14Q7Z406 1995 aaKnown RBP23.85■■□□□ 1.41
SNX17-203ENST00000440760 NUCB1Q02818 461 aa23.85■■□□□ 1.41
SNX17-203ENST00000440760 LNPKQ9C0E8 428 aa23.85■■□□□ 1.41
SNX17-203ENST00000440760 GRM8O00222 908 aa23.84■■□□□ 1.41
SNX17-203ENST00000440760 SMARCC1Q92922 1105 aaPredicted RBP23.84■■□□□ 1.41
SNX17-203ENST00000440760 RREB1Q92766 1687 aa23.84■■□□□ 1.41
SNX17-203ENST00000440760 KCNQ4P56696 695 aa23.83■■□□□ 1.41
SNX17-203ENST00000440760 ANKRD45Q5TZF3 282 aa23.83■■□□□ 1.41
SNX17-203ENST00000440760 DCTPP1Q9H773 170 aa23.83■■□□□ 1.41
SNX17-203ENST00000440760 HMMRO75330 724 aa23.82■■□□□ 1.4
SNX17-203ENST00000440760 GCKRQ14397 625 aa23.82■■□□□ 1.4
SNX17-203ENST00000440760 CHD1LQ86WJ1 897 aa23.82■■□□□ 1.4
SNX17-203ENST00000440760 JARID2Q92833 1246 aaPredicted RBP23.82■■□□□ 1.4
SNX17-203ENST00000440760 ARXQ96QS3 562 aa23.82■■□□□ 1.4
SNX17-203ENST00000440760 APBB1O00213 710 aa23.82■■□□□ 1.4
SNX17-203ENST00000440760 CRKLP46109 303 aaKnown RBP23.82■■□□□ 1.4
SNX17-203ENST00000440760 ATP8B2P98198 1209 aa23.82■■□□□ 1.4
SNX17-203ENST00000440760 BCL11AQ9H165 835 aa23.82■■□□□ 1.4
SNX17-203ENST00000440760 SUCLG2Q96I99 432 aa23.81■■□□□ 1.4
SNX17-203ENST00000440760 ZNF831Q5JPB2 1677 aa23.81■■□□□ 1.4
SNX17-203ENST00000440760 INTS5Q6P9B9 1019 aaKnown RBP23.8■■□□□ 1.4
SNX17-203ENST00000440760 KIF6Q6ZMV9 814 aa23.8■■□□□ 1.4
SNX17-203ENST00000440760 UTYO14607 1347 aa23.8■■□□□ 1.4
SNX17-203ENST00000440760 ZNF772Q68DY9 489 aaPredicted RBP23.8■■□□□ 1.4
SNX17-203ENST00000440760 PPP1R42Q7Z4L9 355 aa23.8■■□□□ 1.4
SNX17-203ENST00000440760 CCDC87Q9NVE4 849 aa23.8■■□□□ 1.4
SNX17-203ENST00000440760 EXOC6BQ9Y2D4 811 aa23.79■■□□□ 1.4
SNX17-203ENST00000440760 KAZALD1Q96I82 304 aa23.78■■□□□ 1.4
SNX17-203ENST00000440760 LY75O60449 1722 aa23.77■■□□□ 1.4
SNX17-203ENST00000440760 ANKRD36CQ5JPF3 1778 aa23.77■■□□□ 1.4
SNX17-203ENST00000440760 SRGAP3O43295 1099 aa23.77■■□□□ 1.4
SNX17-203ENST00000440760 UBE3BQ7Z3V4 1068 aa23.77■■□□□ 1.4
SNX17-203ENST00000440760 LINC00116Q8NCU8 138 aa23.77■■□□□ 1.4
SNX17-203ENST00000440760 MAP3K15Q6ZN16 1313 aa23.77■■□□□ 1.4
SNX17-203ENST00000440760 IBTKQ9P2D0 1353 aaPredicted RBP23.77■■□□□ 1.39
SNX17-203ENST00000440760 SMARCA5O60264 1052 aaPredicted RBP23.76■■□□□ 1.39
SNX17-203ENST00000440760 IL6STP40189 918 aaPredicted RBP23.76■■□□□ 1.39
SNX17-203ENST00000440760 KRT27Q7Z3Y8 459 aa23.76■■□□□ 1.39
SNX17-203ENST00000440760 BICC1Q9H694 974 aaKnown RBP23.76■■□□□ 1.39
SNX17-203ENST00000440760 NUP98P52948 1817 aa23.76■■□□□ 1.39
SNX17-203ENST00000440760 A0A087WZG4 1122 aa23.76■■□□□ 1.39
SNX17-203ENST00000440760 RBM6P78332 1123 aaKnown RBP23.76■■□□□ 1.39
SNX17-203ENST00000440760 SSH3Q8TE77 659 aa23.76■■□□□ 1.39
SNX17-203ENST00000440760 TBC1D2BQ9UPU7 963 aa23.76■■□□□ 1.39
SNX17-203ENST00000440760 HLFQ16534 295 aa23.75■■□□□ 1.39
SNX17-203ENST00000440760 RTL5Q5HYW3 569 aaPredicted RBP23.75■■□□□ 1.39
SNX17-203ENST00000440760 POLA2Q14181 598 aa23.74■■□□□ 1.39
SNX17-203ENST00000440760 DZIP3Q86Y13 1208 aaKnown RBP23.74■■□□□ 1.39
SNX17-203ENST00000440760 FBXO41Q8TF61 875 aa23.74■■□□□ 1.39
SNX17-203ENST00000440760 EIF5P55010 431 aaKnown RBP23.74■■□□□ 1.39
SNX17-203ENST00000440760 EPHA10Q5JZY3 1008 aa23.74■■□□□ 1.39
SNX17-203ENST00000440760 CWC25Q9NXE8 425 aaPredicted RBP23.74■■□□□ 1.39
SNX17-203ENST00000440760 TAF1LQ8IZX4 1826 aa23.73■■□□□ 1.39
SNX17-203ENST00000440760 TCIRG1Q13488 830 aa23.72■■□□□ 1.39
SNX17-203ENST00000440760 CASP7P55210 303 aa23.72■■□□□ 1.39
SNX17-203ENST00000440760 MTX1Q13505 466 aa23.72■■□□□ 1.39
SNX17-203ENST00000440760 NPM2Q86SE8 214 aaKnown RBP23.72■■□□□ 1.39
SNX17-203ENST00000440760 ISCA1Q9BUE6 129 aa23.72■■□□□ 1.39
SNX17-203ENST00000440760 GIGYF2Q6Y7W6 1299 aaKnown RBP23.71■■□□□ 1.39
SNX17-203ENST00000440760 C16orf71Q8IYS4 520 aaPredicted RBP23.71■■□□□ 1.39
SNX17-203ENST00000440760 RBM19Q9Y4C8 960 aaKnown RBP23.71■■□□□ 1.39
SNX17-203ENST00000440760 GPTP24298 496 aa23.71■■□□□ 1.39
SNX17-203ENST00000440760 CCDC191Q8NCU4 936 aa23.71■■□□□ 1.39
SNX17-203ENST00000440760 OTUD7AQ8TE49 926 aaPredicted RBP23.71■■□□□ 1.39
SNX17-203ENST00000440760 CCNL1Q9UK58 526 aaPredicted RBP23.71■■□□□ 1.39
SNX17-203ENST00000440760 COL15A1P39059 1388 aa23.7■■□□□ 1.38
SNX17-203ENST00000440760 C8orf34Q49A92 452 aa23.7■■□□□ 1.38
SNX17-203ENST00000440760 BACH2Q9BYV9 841 aa23.7■■□□□ 1.38
SNX17-203ENST00000440760 BCL11BQ9C0K0 894 aaPredicted RBP23.7■■□□□ 1.38
SNX17-203ENST00000440760 HDAC5Q9UQL6 1122 aa23.7■■□□□ 1.38
SNX17-203ENST00000440760 SMIM5Q71RC9 77 aa23.69■■□□□ 1.38
SNX17-203ENST00000440760 BCORQ6W2J9 1755 aa23.69■■□□□ 1.38
SNX17-203ENST00000440760 SURF6O75683 361 aaKnown RBP23.69■■□□□ 1.38
SNX17-203ENST00000440760 FAM196AQ6ZSG2 479 aa23.69■■□□□ 1.38
SNX17-203ENST00000440760 ZBTB47Q9UFB7 747 aaPredicted RBP23.69■■□□□ 1.38
SNX17-203ENST00000440760 PA2G4Q9UQ80 394 aaKnown RBP23.69■■□□□ 1.38
SNX17-203ENST00000440760 H7C1W4 665 aa23.68■■□□□ 1.38
SNX17-203ENST00000440760 TRIM37O94972 964 aa23.68■■□□□ 1.38
SNX17-203ENST00000440760 FAM161AQ3B820 660 aa23.68■■□□□ 1.38
SNX17-203ENST00000440760 RGS17Q9UGC6 210 aaPredicted RBP23.68■■□□□ 1.38
SNX17-203ENST00000440760 CNTNAP4Q9C0A0 1308 aa23.67■■□□□ 1.38
SNX17-203ENST00000440760 LRRCC1Q9C099 1032 aa23.66■■□□□ 1.38
SNX17-203ENST00000440760 ERVV-1B6SEH8 477 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms