RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 IFIT3O14879 490 aaKnown RBP14.19□□□□□ -0.14
NEK1-201ENST00000439128 DESP17661 470 aa14.19□□□□□ -0.14
NEK1-201ENST00000439128 FANCIQ9NVI1 1328 aa14.19□□□□□ -0.14
NEK1-201ENST00000439128 DEKP35659 375 aaKnown RBP14.19□□□□□ -0.14
NEK1-201ENST00000439128 ZNF772Q68DY9 489 aaPredicted RBP14.19□□□□□ -0.14
NEK1-201ENST00000439128 CATIPQ7Z7H3 387 aa14.19□□□□□ -0.14
NEK1-201ENST00000439128 DDX11Q96FC9 970 aa14.19□□□□□ -0.14
NEK1-201ENST00000439128 ADAMTS12P58397 1594 aa14.19□□□□□ -0.14
NEK1-201ENST00000439128 SMC2O95347 1197 aa14.19□□□□□ -0.14
NEK1-201ENST00000439128 DHX8Q14562 1220 aaKnown RBP14.19□□□□□ -0.14
NEK1-201ENST00000439128 DRC1Q96MC2 740 aa14.19□□□□□ -0.14
NEK1-201ENST00000439128 KAT14Q9H8E8 782 aa14.19□□□□□ -0.14
NEK1-201ENST00000439128 TRPM2O94759 1503 aa14.19□□□□□ -0.14
NEK1-201ENST00000439128 AEBP1Q8IUX7 1158 aa14.19□□□□□ -0.14
NEK1-201ENST00000439128 CASTP20810 708 aaKnown RBP14.19□□□□□ -0.14
NEK1-201ENST00000439128 MBIPQ9NS73 344 aa14.19□□□□□ -0.14
NEK1-201ENST00000439128 SAMM50Q9Y512 469 aa14.19□□□□□ -0.14
NEK1-201ENST00000439128 MSL1Q68DK7 614 aa14.18□□□□□ -0.14
NEK1-201ENST00000439128 CCDC196A0A1B0GTZ2 297 aa14.18□□□□□ -0.14
NEK1-201ENST00000439128 SLFN5Q08AF3 891 aa14.18□□□□□ -0.14
NEK1-201ENST00000439128 PRPF40BQ6NWY9 871 aaKnown RBP14.18□□□□□ -0.14
NEK1-201ENST00000439128 CYP7A1P22680 504 aa14.18□□□□□ -0.14
NEK1-201ENST00000439128 EIF4A2Q14240 407 aaKnown RBP14.18□□□□□ -0.14
NEK1-201ENST00000439128 BCS1LQ9Y276 419 aa14.18□□□□□ -0.14
NEK1-201ENST00000439128 TNNI2P48788 182 aa14.18□□□□□ -0.14
NEK1-201ENST00000439128 UBA5Q9GZZ9 404 aa14.18□□□□□ -0.14
NEK1-201ENST00000439128 PTPRCP08575 1304 aa14.18□□□□□ -0.14
NEK1-201ENST00000439128 BIVM-ERCC5R4GMW8 1640 aa14.17□□□□□ -0.14
NEK1-201ENST00000439128 IRS4O14654 1257 aaPredicted RBP14.17□□□□□ -0.14
NEK1-201ENST00000439128 PRIM1P49642 420 aaKnown RBP14.17□□□□□ -0.14
NEK1-201ENST00000439128 CEP57L1Q8IYX8 460 aa14.17□□□□□ -0.14
NEK1-201ENST00000439128 KIAA0556O60303 1618 aa14.17□□□□□ -0.14
NEK1-201ENST00000439128 NLRP5P59047 1200 aa14.17□□□□□ -0.14
NEK1-201ENST00000439128 SMARCE1Q969G3 411 aa14.17□□□□□ -0.14
NEK1-201ENST00000439128 TSPY3P0CV98 308 aa14.16□□□□□ -0.14
NEK1-201ENST00000439128 TSPY8P0CW00 308 aa14.16□□□□□ -0.14
NEK1-201ENST00000439128 LARGE2Q8N3Y3 721 aa14.16□□□□□ -0.14
NEK1-201ENST00000439128 CAGE1Q8TC20 777 aa14.16□□□□□ -0.14
NEK1-201ENST00000439128 JAG2Q9Y219 1238 aa14.16□□□□□ -0.14
NEK1-201ENST00000439128 FLT4P35916 1363 aa14.16□□□□□ -0.14
NEK1-201ENST00000439128 NPATQ14207 1427 aa14.16□□□□□ -0.14
NEK1-201ENST00000439128 HOXC9P31274 260 aa14.16□□□□□ -0.14
NEK1-201ENST00000439128 CEP131Q9UPN4 1083 aa14.16□□□□□ -0.14
NEK1-201ENST00000439128 ATP2B3Q16720 1220 aa14.16□□□□□ -0.14
NEK1-201ENST00000439128 TRPC5Q9UL62 973 aaPredicted RBP14.16□□□□□ -0.14
NEK1-201ENST00000439128 STX8Q9UNK0 236 aa14.16□□□□□ -0.14
NEK1-201ENST00000439128 ITSN2Q9NZM3 1697 aa14.15□□□□□ -0.14
NEK1-201ENST00000439128 IP6K1Q92551 441 aa14.15□□□□□ -0.14
NEK1-201ENST00000439128 DISP3Q9P2K9 1392 aa14.15□□□□□ -0.14
NEK1-201ENST00000439128 GOLGA8AA7E2F4 631 aa14.15□□□□□ -0.14
NEK1-201ENST00000439128 GOLGA8BA8MQT2 603 aa14.15□□□□□ -0.14
NEK1-201ENST00000439128 BAG4O95429 457 aaKnown RBP14.15□□□□□ -0.14
NEK1-201ENST00000439128 NAA16Q6N069 864 aaPredicted RBP14.15□□□□□ -0.14
NEK1-201ENST00000439128 CCDC194A0A1B0GVG4 234 aa14.15□□□□□ -0.14
NEK1-201ENST00000439128 TMEM266Q2M3C6 531 aa14.15□□□□□ -0.14
NEK1-201ENST00000439128 ZSCAN31Q96LW9 406 aaPredicted RBP14.15□□□□□ -0.14
NEK1-201ENST00000439128 DACH1Q9UI36 760 aa14.15□□□□□ -0.14
NEK1-201ENST00000439128 ARHGEF10O15013 1369 aa14.15□□□□□ -0.14
NEK1-201ENST00000439128 ANKRD2Q9GZV1 360 aa14.15□□□□□ -0.15
NEK1-201ENST00000439128 MTHFSDQ2M296 383 aaKnown RBP14.14□□□□□ -0.15
NEK1-201ENST00000439128 MFSD6Q6ZSS7 791 aa14.14□□□□□ -0.15
NEK1-201ENST00000439128 ZNHIT6Q9NWK9 470 aaKnown RBP14.14□□□□□ -0.15
NEK1-201ENST00000439128 LMBR1LQ6UX01 489 aa14.14□□□□□ -0.15
NEK1-201ENST00000439128 DEF6Q9H4E7 631 aa14.14□□□□□ -0.15
NEK1-201ENST00000439128 ABCC1P33527 1531 aa14.14□□□□□ -0.15
NEK1-201ENST00000439128 KIF5BP33176 963 aa14.14□□□□□ -0.15
NEK1-201ENST00000439128 ARHGAP27Q6ZUM4 889 aa14.14□□□□□ -0.15
NEK1-201ENST00000439128 CKAP2LQ8IYA6 745 aa14.14□□□□□ -0.15
NEK1-201ENST00000439128 UFL1O94874 794 aa14.14□□□□□ -0.15
NEK1-201ENST00000439128 PRKG1Q13976 671 aa14.14□□□□□ -0.15
NEK1-201ENST00000439128 HELBQ8NG08 1087 aaPredicted RBP14.14□□□□□ -0.15
NEK1-201ENST00000439128 PPP1R12BO60237 982 aaPredicted RBP14.13□□□□□ -0.15
NEK1-201ENST00000439128 SSRP1Q08945 709 aaKnown RBP14.13□□□□□ -0.15
NEK1-201ENST00000439128 CCDC144CPQ8IYA2 1237 aa14.13□□□□□ -0.15
NEK1-201ENST00000439128 HAND2P61296 217 aa14.13□□□□□ -0.15
NEK1-201ENST00000439128 RAB34Q9BZG1 259 aa14.13□□□□□ -0.15
NEK1-201ENST00000439128 VSIG10Q8N0Z9 540 aa14.13□□□□□ -0.15
NEK1-201ENST00000439128 PLCD3Q8N3E9 789 aa14.12□□□□□ -0.15
NEK1-201ENST00000439128 CCDC12Q8WUD4 166 aaPredicted RBP14.12□□□□□ -0.15
NEK1-201ENST00000439128 SLC4A4Q9Y6R1 1079 aa14.12□□□□□ -0.15
NEK1-201ENST00000439128 SSR1P43307 286 aaKnown RBP14.12□□□□□ -0.15
NEK1-201ENST00000439128 SERPINC1P01008 464 aa14.12□□□□□ -0.15
NEK1-201ENST00000439128 TMEM67Q5HYA8 995 aa14.12□□□□□ -0.15
NEK1-201ENST00000439128 CCDC24Q8N4L8 307 aa14.12□□□□□ -0.15
NEK1-201ENST00000439128 KAT6BQ8WYB5 2073 aa14.11□□□□□ -0.15
NEK1-201ENST00000439128 RNMTO43148 476 aaKnown RBP14.11□□□□□ -0.15
NEK1-201ENST00000439128 MAP3K9P80192 1104 aa14.11□□□□□ -0.15
NEK1-201ENST00000439128 CCDC39Q9UFE4 941 aa14.11□□□□□ -0.15
NEK1-201ENST00000439128 NOM1Q5C9Z4 860 aaKnown RBP14.11□□□□□ -0.15
NEK1-201ENST00000439128 EYA1Q99502 592 aa14.11□□□□□ -0.15
NEK1-201ENST00000439128 PRPF40AO75400 957 aaKnown RBP14.11□□□□□ -0.15
NEK1-201ENST00000439128 POTEJP0CG39 1038 aa14.11□□□□□ -0.15
NEK1-201ENST00000439128 RARSP54136 660 aaKnown RBP14.11□□□□□ -0.15
NEK1-201ENST00000439128 KRT85P78386 507 aa14.11□□□□□ -0.15
NEK1-201ENST00000439128 DPP8Q6V1X1 898 aaPredicted RBP14.11□□□□□ -0.15
NEK1-201ENST00000439128 CCDC150Q8NCX0 1101 aa14.11□□□□□ -0.15
NEK1-201ENST00000439128 PICK1Q9NRD5 415 aa14.11□□□□□ -0.15
NEK1-201ENST00000439128 ZFYVE16Q7Z3T8 1539 aa14.1□□□□□ -0.15
NEK1-201ENST00000439128 DPY19L2Q6NUT2 758 aa14.1□□□□□ -0.15
NEK1-201ENST00000439128 RUFY1Q96T51 708 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms