RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 UBR2Q8IWV8 1755 aa10.66□□□□□ -0.7
LINC00578-201ENST00000439009 NPC1L1Q9UHC9 1359 aa10.65□□□□□ -0.7
LINC00578-201ENST00000439009 KIF7Q2M1P5 1343 aa10.65□□□□□ -0.7
LINC00578-201ENST00000439009 FOXN1O15353 648 aa10.65□□□□□ -0.7
LINC00578-201ENST00000439009 ST5P78524 1137 aa10.65□□□□□ -0.7
LINC00578-201ENST00000439009 TIAM2Q8IVF5 1701 aa10.64□□□□□ -0.71
LINC00578-201ENST00000439009 NPR1P16066 1061 aa10.64□□□□□ -0.71
LINC00578-201ENST00000439009 CCDC93Q567U6 631 aa10.64□□□□□ -0.71
LINC00578-201ENST00000439009 DZIP3Q86Y13 1208 aaKnown RBP10.64□□□□□ -0.71
LINC00578-201ENST00000439009 USP16Q9Y5T5 823 aa10.64□□□□□ -0.71
LINC00578-201ENST00000439009 FER1L6Q2WGJ9 1857 aa10.64□□□□□ -0.71
LINC00578-201ENST00000439009 ANKRD31Q8N7Z5 1873 aa10.64□□□□□ -0.71
LINC00578-201ENST00000439009 COL3A1P02461 1466 aaPredicted RBP10.63□□□□□ -0.71
LINC00578-201ENST00000439009 TMEM88BA6NKF7 163 aa10.63□□□□□ -0.71
LINC00578-201ENST00000439009 KCNQ3O43525 872 aa10.63□□□□□ -0.71
LINC00578-201ENST00000439009 CTCFP49711 727 aaPredicted RBP10.63□□□□□ -0.71
LINC00578-201ENST00000439009 VEGFBP49765 207 aa10.63□□□□□ -0.71
LINC00578-201ENST00000439009 FKBP4Q02790 459 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC00578-201ENST00000439009 NPM2Q86SE8 214 aaKnown RBP10.63□□□□□ -0.71
LINC00578-201ENST00000439009 WBP1LQ9NX94 342 aa10.63□□□□□ -0.71
LINC00578-201ENST00000439009 ZNF330Q9Y3S2 320 aaPredicted RBP10.63□□□□□ -0.71
LINC00578-201ENST00000439009 BTBD11A6QL63 1104 aa10.62□□□□□ -0.71
LINC00578-201ENST00000439009 FZD9O00144 591 aa10.62□□□□□ -0.71
LINC00578-201ENST00000439009 CC2D1BQ5T0F9 858 aaKnown RBP10.62□□□□□ -0.71
LINC00578-201ENST00000439009 TPTE2Q6XPS3 522 aa10.62□□□□□ -0.71
LINC00578-201ENST00000439009 NBPF5PQ86XG9 351 aaPredicted RBP10.62□□□□□ -0.71
LINC00578-201ENST00000439009 RTKN2Q8IZC4 609 aa10.62□□□□□ -0.71
LINC00578-201ENST00000439009 PHACTR3Q96KR7 559 aa10.62□□□□□ -0.71
LINC00578-201ENST00000439009 HACL1Q9UJ83 578 aa10.62□□□□□ -0.71
LINC00578-201ENST00000439009 SCN7AQ01118 1682 aa10.62□□□□□ -0.71
LINC00578-201ENST00000439009 DICER1Q9UPY3 1922 aaKnown RBP10.61□□□□□ -0.71
LINC00578-201ENST00000439009 RASSF10A6NK89 507 aa10.61□□□□□ -0.71
LINC00578-201ENST00000439009 U2SURPO15042 1029 aaKnown RBP10.61□□□□□ -0.71
LINC00578-201ENST00000439009 NPHP1O15259 732 aa10.61□□□□□ -0.71
LINC00578-201ENST00000439009 SNRPA1P09661 255 aaKnown RBP10.61□□□□□ -0.71
LINC00578-201ENST00000439009 PNMA8AQ86V59 439 aaPredicted RBP10.61□□□□□ -0.71
LINC00578-201ENST00000439009 ZNF652Q9Y2D9 606 aa10.61□□□□□ -0.71
LINC00578-201ENST00000439009 COL11A2P13942 1736 aaPredicted RBP10.61□□□□□ -0.71
LINC00578-201ENST00000439009 SLX4Q8IY92 1834 aa10.61□□□□□ -0.71
LINC00578-201ENST00000439009 ZNF541Q9H0D2 1346 aa10.6□□□□□ -0.71
LINC00578-201ENST00000439009 NBPF26B4DH59 902 aa10.6□□□□□ -0.71
LINC00578-201ENST00000439009 ALDH1B1P30837 517 aa10.6□□□□□ -0.71
LINC00578-201ENST00000439009 EPHX2P34913 555 aa10.6□□□□□ -0.71
LINC00578-201ENST00000439009 CRY2Q49AN0 593 aa10.6□□□□□ -0.71
LINC00578-201ENST00000439009 NBPF10Q6P3W6 841 aaKnown RBP10.6□□□□□ -0.71
LINC00578-201ENST00000439009 NBPF15Q8N660 670 aa10.6□□□□□ -0.71
LINC00578-201ENST00000439009 AIDAQ96BJ3 306 aa10.6□□□□□ -0.71
LINC00578-201ENST00000439009 PSMD1Q99460 953 aa10.6□□□□□ -0.71
LINC00578-201ENST00000439009 RSPH6AQ9H0K4 717 aa10.6□□□□□ -0.71
LINC00578-201ENST00000439009 ZNF277Q9NRM2 450 aaPredicted RBP10.6□□□□□ -0.71
LINC00578-201ENST00000439009 CCDC88AQ3V6T2 1871 aa10.59□□□□□ -0.71
LINC00578-201ENST00000439009 SNED1Q8TER0 1413 aa10.59□□□□□ -0.71
LINC00578-201ENST00000439009 PRAMEF22A3QJZ6 481 aa10.59□□□□□ -0.71
LINC00578-201ENST00000439009 HTATSF1O43719 755 aaKnown RBP10.59□□□□□ -0.71
LINC00578-201ENST00000439009 OLFM4Q6UX06 510 aa10.59□□□□□ -0.71
LINC00578-201ENST00000439009 CNTROBQ8N137 903 aa10.59□□□□□ -0.71
LINC00578-201ENST00000439009 GPC2Q8N158 579 aa10.59□□□□□ -0.71
LINC00578-201ENST00000439009 NIP7Q9Y221 180 aaKnown RBP eCLIP10.59□□□□□ -0.71
LINC00578-201ENST00000439009 SIPA1L3O60292 1781 aaPredicted RBP10.58□□□□□ -0.72
LINC00578-201ENST00000439009 PRKAR2BP31323 418 aa10.58□□□□□ -0.72
LINC00578-201ENST00000439009 IARSP41252 1262 aaKnown RBP10.58□□□□□ -0.72
LINC00578-201ENST00000439009 PIP4K2AP48426 406 aaPredicted RBP10.58□□□□□ -0.72
LINC00578-201ENST00000439009 DEFB115Q30KQ5 88 aa10.58□□□□□ -0.72
LINC00578-201ENST00000439009 EAPPQ56P03 285 aaPredicted RBP10.58□□□□□ -0.72
LINC00578-201ENST00000439009 CC2D2BQ6DHV5 1058 aa10.58□□□□□ -0.72
LINC00578-201ENST00000439009 SYNE4Q8N205 404 aa10.58□□□□□ -0.72
LINC00578-201ENST00000439009 SCN4AP35499 1836 aa10.58□□□□□ -0.72
LINC00578-201ENST00000439009 HSPA8P11142 646 aaKnown RBP10.57□□□□□ -0.72
LINC00578-201ENST00000439009 HOXA10P31260 410 aaPredicted RBP10.57□□□□□ -0.72
LINC00578-201ENST00000439009 LBX1P52954 281 aa10.57□□□□□ -0.72
LINC00578-201ENST00000439009 MAP2K1Q02750 393 aaPredicted RBP10.57□□□□□ -0.72
LINC00578-201ENST00000439009 HLFQ16534 295 aa10.57□□□□□ -0.72
LINC00578-201ENST00000439009 GRIPAP1Q4V328 841 aa10.57□□□□□ -0.72
LINC00578-201ENST00000439009 MAP1SQ66K74 1059 aaPredicted RBP10.57□□□□□ -0.72
LINC00578-201ENST00000439009 ADAMTSL1Q8N6G6 1762 aa10.57□□□□□ -0.72
LINC00578-201ENST00000439009 WDR33Q9C0J8 1336 aaKnown RBP10.57□□□□□ -0.72
LINC00578-201ENST00000439009 ERVV-1B6SEH8 477 aa10.56□□□□□ -0.72
LINC00578-201ENST00000439009 MCM10Q7L590 875 aa10.56□□□□□ -0.72
LINC00578-201ENST00000439009 RTF1Q92541 710 aaKnown RBP10.56□□□□□ -0.72
LINC00578-201ENST00000439009 DDX21Q9NR30 783 aaKnown RBP eCLIP10.56□□□□□ -0.72
LINC00578-201ENST00000439009 CLEC11AQ9Y240 323 aa10.56□□□□□ -0.72
LINC00578-201ENST00000439009 ARFGEF2Q9Y6D5 1785 aa10.56□□□□□ -0.72
LINC00578-201ENST00000439009 RNF123Q5XPI4 1314 aa10.56□□□□□ -0.72
LINC00578-201ENST00000439009 BCORQ6W2J9 1755 aa10.55□□□□□ -0.72
LINC00578-201ENST00000439009 TAF7Q15545 349 aaPredicted RBP10.55□□□□□ -0.72
LINC00578-201ENST00000439009 JDP2Q8WYK2 163 aa10.55□□□□□ -0.72
LINC00578-201ENST00000439009 ABHD8Q96I13 439 aa10.55□□□□□ -0.72
LINC00578-201ENST00000439009 CFAP53Q96M91 514 aa10.55□□□□□ -0.72
LINC00578-201ENST00000439009 NYXQ9GZU5 481 aa10.55□□□□□ -0.72
LINC00578-201ENST00000439009 NUDCQ9Y266 331 aa10.55□□□□□ -0.72
LINC00578-201ENST00000439009 VIRMAQ69YN4 1812 aaKnown RBP10.55□□□□□ -0.72
LINC00578-201ENST00000439009 SLC34A2O95436 690 aa10.54□□□□□ -0.72
LINC00578-201ENST00000439009 ZEB1P37275 1124 aaPredicted RBP10.54□□□□□ -0.72
LINC00578-201ENST00000439009 RIC1Q4ADV7 1423 aa10.54□□□□□ -0.72
LINC00578-201ENST00000439009 CRAMP1Q96RY5 1269 aa10.54□□□□□ -0.72
LINC00578-201ENST00000439009 IBTKQ9P2D0 1353 aaPredicted RBP10.53□□□□□ -0.72
LINC00578-201ENST00000439009 GTF2E1P29083 439 aaPredicted RBP10.53□□□□□ -0.72
LINC00578-201ENST00000439009 EPS15P42566 896 aa10.53□□□□□ -0.72
LINC00578-201ENST00000439009 RGS19P49795 217 aa10.53□□□□□ -0.72
LINC00578-201ENST00000439009 SCNN1DP51172 638 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms