RNA–Protein interactions for RNA: ENST00000435702.1

AP001046.1-201, humanhuman

TSL 2 BASIC

Gene AP001046.1, Length 2,816 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001046.1-201ENST00000435702 BCL11BQ9C0K0 894 aaPredicted RBP16.45■□□□□ 0.22
AP001046.1-201ENST00000435702 DBF4Q9UBU7 674 aaPredicted RBP16.45■□□□□ 0.22
AP001046.1-201ENST00000435702 ATP5J2-PTCD1G3V325 749 aa16.44■□□□□ 0.22
AP001046.1-201ENST00000435702 XAGE3Q8WTP9 111 aa16.44■□□□□ 0.22
AP001046.1-201ENST00000435702 ILDR2Q71H61 639 aa16.43■□□□□ 0.22
AP001046.1-201ENST00000435702 RIC3Q7Z5B4 369 aa16.43■□□□□ 0.22
AP001046.1-201ENST00000435702 ATG3Q9NT62 314 aa16.43■□□□□ 0.22
AP001046.1-201ENST00000435702 ASAP1Q9ULH1 1129 aa16.43■□□□□ 0.22
AP001046.1-201ENST00000435702 EP400Q96L91 3159 aa16.43■□□□□ 0.22
AP001046.1-201ENST00000435702 UBR2Q8IWV8 1755 aa16.43■□□□□ 0.22
AP001046.1-201ENST00000435702 A1BGP04217 495 aa16.43■□□□□ 0.22
AP001046.1-201ENST00000435702 CHMP4BQ9H444 224 aaKnown RBP16.43■□□□□ 0.22
AP001046.1-201ENST00000435702 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
AP001046.1-201ENST00000435702 C9orf78Q9NZ63 289 aaPredicted RBP16.42■□□□□ 0.22
AP001046.1-201ENST00000435702 KCPQ6ZWJ8 1503 aa16.42■□□□□ 0.22
AP001046.1-201ENST00000435702 GCC1Q96CN9 775 aa16.42■□□□□ 0.22
AP001046.1-201ENST00000435702 DCTPP1Q9H773 170 aa16.42■□□□□ 0.22
AP001046.1-201ENST00000435702 BABAM1Q9NWV8 329 aa16.42■□□□□ 0.22
AP001046.1-201ENST00000435702 PDIA6Q15084 440 aa16.41■□□□□ 0.22
AP001046.1-201ENST00000435702 BEND3Q5T5X7 828 aa16.41■□□□□ 0.22
AP001046.1-201ENST00000435702 PPP1R42Q7Z4L9 355 aa16.41■□□□□ 0.22
AP001046.1-201ENST00000435702 ATP10DQ9P241 1426 aa16.4■□□□□ 0.22
AP001046.1-201ENST00000435702 SRGAP3O43295 1099 aa16.4■□□□□ 0.22
AP001046.1-201ENST00000435702 MAP4K4O95819 1239 aaPredicted RBP16.4■□□□□ 0.22
AP001046.1-201ENST00000435702 RPAP2Q8IXW5 612 aaPredicted RBP16.4■□□□□ 0.22
AP001046.1-201ENST00000435702 MYD88Q99836 296 aa16.4■□□□□ 0.22
AP001046.1-201ENST00000435702 PA2G4Q9UQ80 394 aaKnown RBP16.4■□□□□ 0.22
AP001046.1-201ENST00000435702 ADCY9O60503 1353 aa16.4■□□□□ 0.22
AP001046.1-201ENST00000435702 KLHDC4Q8TBB5 520 aa16.4■□□□□ 0.22
AP001046.1-201ENST00000435702 SURF6O75683 361 aaKnown RBP16.39■□□□□ 0.21
AP001046.1-201ENST00000435702 GOLGB1Q14789 3259 aaKnown RBP16.38■□□□□ 0.21
AP001046.1-201ENST00000435702 PALLDQ8WX93 1383 aa16.38■□□□□ 0.21
AP001046.1-201ENST00000435702 GNAI3P08754 354 aa16.38■□□□□ 0.21
AP001046.1-201ENST00000435702 NUTM1Q86Y26 1132 aa16.38■□□□□ 0.21
AP001046.1-201ENST00000435702 PLEKHM2Q8IWE5 1019 aa16.38■□□□□ 0.21
AP001046.1-201ENST00000435702 FMNL2Q96PY5 1086 aa16.38■□□□□ 0.21
AP001046.1-201ENST00000435702 SIL1Q9H173 461 aa16.38■□□□□ 0.21
AP001046.1-201ENST00000435702 ZBTB3Q9H5J0 574 aa16.38■□□□□ 0.21
AP001046.1-201ENST00000435702 LY75O60449 1722 aa16.38■□□□□ 0.21
AP001046.1-201ENST00000435702 SNRPA1P09661 255 aaKnown RBP16.38■□□□□ 0.21
AP001046.1-201ENST00000435702 GSPT1P15170 499 aaKnown RBP16.38■□□□□ 0.21
AP001046.1-201ENST00000435702 TBC1D32Q96NH3 1257 aa16.38■□□□□ 0.21
AP001046.1-201ENST00000435702 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
AP001046.1-201ENST00000435702 TTLL7Q6ZT98 887 aa16.37■□□□□ 0.21
AP001046.1-201ENST00000435702 SMARCC1Q92922 1105 aaPredicted RBP16.37■□□□□ 0.21
AP001046.1-201ENST00000435702 TBC1D2Q9BYX2 928 aa16.37■□□□□ 0.21
AP001046.1-201ENST00000435702 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
AP001046.1-201ENST00000435702 KSR2Q6VAB6 950 aa16.37■□□□□ 0.21
AP001046.1-201ENST00000435702 HEG1Q9ULI3 1381 aa16.36■□□□□ 0.21
AP001046.1-201ENST00000435702 C5P01031 1676 aa16.36■□□□□ 0.21
AP001046.1-201ENST00000435702 APBA3O96018 575 aa16.36■□□□□ 0.21
AP001046.1-201ENST00000435702 OS9Q13438 667 aaPredicted RBP16.36■□□□□ 0.21
AP001046.1-201ENST00000435702 SLC4A9Q96Q91 983 aa16.36■□□□□ 0.21
AP001046.1-201ENST00000435702 UPF2Q9HAU5 1272 aaKnown RBP16.36■□□□□ 0.21
AP001046.1-201ENST00000435702 HMMRO75330 724 aa16.36■□□□□ 0.21
AP001046.1-201ENST00000435702 BECN1Q14457 450 aa16.36■□□□□ 0.21
AP001046.1-201ENST00000435702 TJP1Q07157 1748 aa16.36■□□□□ 0.21
AP001046.1-201ENST00000435702 KCNQ4P56696 695 aa16.35■□□□□ 0.21
AP001046.1-201ENST00000435702 CCDC85AQ96PX6 553 aaPredicted RBP16.35■□□□□ 0.21
AP001046.1-201ENST00000435702 RGPD3A6NKT7 1758 aaPredicted RBP16.35■□□□□ 0.21
AP001046.1-201ENST00000435702 RGPD4Q7Z3J3 1758 aa16.35■□□□□ 0.21
AP001046.1-201ENST00000435702 NBPF26B4DH59 902 aa16.35■□□□□ 0.21
AP001046.1-201ENST00000435702 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
AP001046.1-201ENST00000435702 NBPF14Q5TI25 921 aa16.35■□□□□ 0.21
AP001046.1-201ENST00000435702 NBPF10Q6P3W6 841 aaKnown RBP16.35■□□□□ 0.21
AP001046.1-201ENST00000435702 NBPF15Q8N660 670 aa16.35■□□□□ 0.21
AP001046.1-201ENST00000435702 HYPKQ9NX55 129 aa16.35■□□□□ 0.21
AP001046.1-201ENST00000435702 CICQ96RK0 1608 aaPredicted RBP16.35■□□□□ 0.21
AP001046.1-201ENST00000435702 ZNF831Q5JPB2 1677 aa16.35■□□□□ 0.21
AP001046.1-201ENST00000435702 IGKV5-2P06315 115 aa16.34■□□□□ 0.21
AP001046.1-201ENST00000435702 SOS1Q07889 1333 aaPredicted RBP16.34■□□□□ 0.21
AP001046.1-201ENST00000435702 ANKRD13DQ6ZTN6 518 aa16.34■□□□□ 0.21
AP001046.1-201ENST00000435702 LOC102724428A0A0B4J2F2 783 aa16.33■□□□□ 0.21
AP001046.1-201ENST00000435702 SIK1P57059 783 aa16.33■□□□□ 0.21
AP001046.1-201ENST00000435702 SUCLG2Q96I99 432 aa16.33■□□□□ 0.21
AP001046.1-201ENST00000435702 CHMP3Q9Y3E7 222 aa16.33■□□□□ 0.21
AP001046.1-201ENST00000435702 PLSCR1O15162 318 aa16.33■□□□□ 0.2
AP001046.1-201ENST00000435702 HOXB7P09629 217 aa16.33■□□□□ 0.2
AP001046.1-201ENST00000435702 TBC1D9Q6ZT07 1266 aa16.33■□□□□ 0.2
AP001046.1-201ENST00000435702 DNAJC10Q8IXB1 793 aa16.33■□□□□ 0.2
AP001046.1-201ENST00000435702 RILPL2Q969X0 211 aa16.33■□□□□ 0.2
AP001046.1-201ENST00000435702 LAMB4A4D0S4 1761 aa16.32■□□□□ 0.2
AP001046.1-201ENST00000435702 UPF1Q92900 1129 aaKnown RBP eCLIP16.32■□□□□ 0.2
AP001046.1-201ENST00000435702 TRIM6-TRIM34B2RNG4 842 aa16.32■□□□□ 0.2
AP001046.1-201ENST00000435702 UBE3BQ7Z3V4 1068 aa16.32■□□□□ 0.2
AP001046.1-201ENST00000435702 C22orf23Q9BZE7 217 aa16.32■□□□□ 0.2
AP001046.1-201ENST00000435702 LRRCC1Q9C099 1032 aa16.32■□□□□ 0.2
AP001046.1-201ENST00000435702 BICC1Q9H694 974 aaKnown RBP16.32■□□□□ 0.2
AP001046.1-201ENST00000435702 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.32■□□□□ 0.2
AP001046.1-201ENST00000435702 DDX58O95786 925 aaKnown RBP16.31■□□□□ 0.2
AP001046.1-201ENST00000435702 ITPK1Q13572 414 aa16.31■□□□□ 0.2
AP001046.1-201ENST00000435702 EPHA10Q5JZY3 1008 aa16.31■□□□□ 0.2
AP001046.1-201ENST00000435702 CCDC125Q86Z20 511 aa16.31■□□□□ 0.2
AP001046.1-201ENST00000435702 VSIG10Q8N0Z9 540 aa16.31■□□□□ 0.2
AP001046.1-201ENST00000435702 PROM2Q8N271 834 aa16.31■□□□□ 0.2
AP001046.1-201ENST00000435702 ANTXR1Q9H6X2 564 aa16.31■□□□□ 0.2
AP001046.1-201ENST00000435702 SF3B2Q13435 895 aaKnown RBP16.31■□□□□ 0.2
AP001046.1-201ENST00000435702 SMIM5Q71RC9 77 aa16.31■□□□□ 0.2
AP001046.1-201ENST00000435702 COL5A3P25940 1745 aaPredicted RBP16.31■□□□□ 0.2
AP001046.1-201ENST00000435702 SDSP20132 328 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms