RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 DCTPP1Q9H773 170 aa13.2□□□□□ -0.3
NEFM-202ENST00000433454 AFDNP55196 1824 aaKnown RBP13.2□□□□□ -0.3
NEFM-202ENST00000433454 NEURL1BA8MQ27 555 aa13.19□□□□□ -0.3
NEFM-202ENST00000433454 IGKV5-2P06315 115 aa13.19□□□□□ -0.3
NEFM-202ENST00000433454 CHD1LQ86WJ1 897 aa13.19□□□□□ -0.3
NEFM-202ENST00000433454 LOC102724428A0A0B4J2F2 783 aa13.19□□□□□ -0.3
NEFM-202ENST00000433454 GRM8O00222 908 aa13.19□□□□□ -0.3
NEFM-202ENST00000433454 SIK1P57059 783 aa13.19□□□□□ -0.3
NEFM-202ENST00000433454 TTLL7Q6ZT98 887 aa13.19□□□□□ -0.3
NEFM-202ENST00000433454 SEPT12Q8IYM1 358 aa13.19□□□□□ -0.3
NEFM-202ENST00000433454 ANKRD45Q5TZF3 282 aa13.18□□□□□ -0.3
NEFM-202ENST00000433454 ZNF330Q9Y3S2 320 aaPredicted RBP13.18□□□□□ -0.3
NEFM-202ENST00000433454 UTYO14607 1347 aa13.18□□□□□ -0.3
NEFM-202ENST00000433454 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
NEFM-202ENST00000433454 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
NEFM-202ENST00000433454 ATP8B2P98198 1209 aa13.18□□□□□ -0.3
NEFM-202ENST00000433454 GCKRQ14397 625 aa13.17□□□□□ -0.3
NEFM-202ENST00000433454 KIF6Q6ZMV9 814 aa13.17□□□□□ -0.3
NEFM-202ENST00000433454 LNPKQ9C0E8 428 aa13.17□□□□□ -0.3
NEFM-202ENST00000433454 BTAF1O14981 1849 aa13.17□□□□□ -0.3
NEFM-202ENST00000433454 PNMA6EA0A0J9YXQ4 647 aa13.17□□□□□ -0.3
NEFM-202ENST00000433454 ZBTB3Q9H5J0 574 aa13.17□□□□□ -0.3
NEFM-202ENST00000433454 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
NEFM-202ENST00000433454 ZBTB1Q9Y2K1 713 aa13.17□□□□□ -0.3
NEFM-202ENST00000433454 RREB1Q92766 1687 aa13.16□□□□□ -0.3
NEFM-202ENST00000433454 PDE4AP27815 886 aa13.16□□□□□ -0.3
NEFM-202ENST00000433454 ZNF772Q68DY9 489 aaPredicted RBP13.16□□□□□ -0.3
NEFM-202ENST00000433454 SBF2Q86WG5 1849 aa13.15□□□□□ -0.3
NEFM-202ENST00000433454 ATP5J2-PTCD1G3V325 749 aa13.15□□□□□ -0.3
NEFM-202ENST00000433454 IL6STP40189 918 aaPredicted RBP13.15□□□□□ -0.3
NEFM-202ENST00000433454 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.3
NEFM-202ENST00000433454 NPM2Q86SE8 214 aaKnown RBP13.15□□□□□ -0.3
NEFM-202ENST00000433454 SSH3Q8TE77 659 aa13.15□□□□□ -0.3
NEFM-202ENST00000433454 COL5A3P25940 1745 aaPredicted RBP13.15□□□□□ -0.3
NEFM-202ENST00000433454 SRGAP3O43295 1099 aa13.15□□□□□ -0.3
NEFM-202ENST00000433454 MTX1Q13505 466 aa13.15□□□□□ -0.3
NEFM-202ENST00000433454 FAM182BQ5T319 152 aa13.15□□□□□ -0.3
NEFM-202ENST00000433454 CCDC87Q9NVE4 849 aa13.15□□□□□ -0.3
NEFM-202ENST00000433454 CRKLP46109 303 aaKnown RBP13.14□□□□□ -0.31
NEFM-202ENST00000433454 ITPK1Q13572 414 aa13.14□□□□□ -0.31
NEFM-202ENST00000433454 POLA2Q14181 598 aa13.14□□□□□ -0.31
NEFM-202ENST00000433454 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
NEFM-202ENST00000433454 BACH2Q9BYV9 841 aa13.14□□□□□ -0.31
NEFM-202ENST00000433454 MAP3K15Q6ZN16 1313 aa13.14□□□□□ -0.31
NEFM-202ENST00000433454 SUCLG2Q96I99 432 aa13.13□□□□□ -0.31
NEFM-202ENST00000433454 ARXQ96QS3 562 aa13.13□□□□□ -0.31
NEFM-202ENST00000433454 CWC25Q9NXE8 425 aaPredicted RBP13.13□□□□□ -0.31
NEFM-202ENST00000433454 RBM19Q9Y4C8 960 aaKnown RBP13.13□□□□□ -0.31
NEFM-202ENST00000433454 COL15A1P39059 1388 aa13.13□□□□□ -0.31
NEFM-202ENST00000433454 INTS5Q6P9B9 1019 aaKnown RBP13.13□□□□□ -0.31
NEFM-202ENST00000433454 CCDC191Q8NCU4 936 aa13.13□□□□□ -0.31
NEFM-202ENST00000433454 EXOC6BQ9Y2D4 811 aa13.13□□□□□ -0.31
NEFM-202ENST00000433454 A0A087WZG4 1122 aa13.12□□□□□ -0.31
NEFM-202ENST00000433454 APBB1O00213 710 aa13.12□□□□□ -0.31
NEFM-202ENST00000433454 PTF1AQ7RTS3 328 aa13.12□□□□□ -0.31
NEFM-202ENST00000433454 UBE3BQ7Z3V4 1068 aa13.12□□□□□ -0.31
NEFM-202ENST00000433454 BICC1Q9H694 974 aaKnown RBP13.12□□□□□ -0.31
NEFM-202ENST00000433454 BRWD3Q6RI45 1802 aa13.12□□□□□ -0.31
NEFM-202ENST00000433454 RBM6P78332 1123 aaKnown RBP13.12□□□□□ -0.31
NEFM-202ENST00000433454 TCIRG1Q13488 830 aa13.12□□□□□ -0.31
NEFM-202ENST00000433454 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
NEFM-202ENST00000433454 ANKRD36CQ5JPF3 1778 aa13.12□□□□□ -0.31
NEFM-202ENST00000433454 EIF5P55010 431 aaKnown RBP13.11□□□□□ -0.31
NEFM-202ENST00000433454 HSP90AB3PQ58FF7 597 aa13.11□□□□□ -0.31
NEFM-202ENST00000433454 GIGYF2Q6Y7W6 1299 aaKnown RBP13.11□□□□□ -0.31
NEFM-202ENST00000433454 KRT27Q7Z3Y8 459 aa13.11□□□□□ -0.31
NEFM-202ENST00000433454 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
NEFM-202ENST00000433454 KAZALD1Q96I82 304 aa13.11□□□□□ -0.31
NEFM-202ENST00000433454 ISCA1Q9BUE6 129 aa13.11□□□□□ -0.31
NEFM-202ENST00000433454 TRIM28Q13263 835 aaKnown RBP13.11□□□□□ -0.31
NEFM-202ENST00000433454 C8orf34Q49A92 452 aa13.11□□□□□ -0.31
NEFM-202ENST00000433454 LRRCC1Q9C099 1032 aa13.11□□□□□ -0.31
NEFM-202ENST00000433454 LY75O60449 1722 aa13.11□□□□□ -0.31
NEFM-202ENST00000433454 ERVV-1B6SEH8 477 aa13.1□□□□□ -0.31
NEFM-202ENST00000433454 SURF6O75683 361 aaKnown RBP13.1□□□□□ -0.31
NEFM-202ENST00000433454 RAB11FIP3O75154 756 aa13.1□□□□□ -0.31
NEFM-202ENST00000433454 HSP90AB4PQ58FF6 505 aa13.1□□□□□ -0.31
NEFM-202ENST00000433454 FAM196AQ6ZSG2 479 aa13.1□□□□□ -0.31
NEFM-202ENST00000433454 BCL11BQ9C0K0 894 aaPredicted RBP13.1□□□□□ -0.31
NEFM-202ENST00000433454 NUP98P52948 1817 aa13.1□□□□□ -0.31
NEFM-202ENST00000433454 CNTNAP4Q9C0A0 1308 aa13.09□□□□□ -0.31
NEFM-202ENST00000433454 H7C1W4 665 aa13.09□□□□□ -0.31
NEFM-202ENST00000433454 SMARCA5O60264 1052 aaPredicted RBP13.09□□□□□ -0.31
NEFM-202ENST00000433454 CASP7P55210 303 aa13.09□□□□□ -0.31
NEFM-202ENST00000433454 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
NEFM-202ENST00000433454 EP400Q96L91 3159 aa13.09□□□□□ -0.31
NEFM-202ENST00000433454 HLFQ16534 295 aa13.09□□□□□ -0.31
NEFM-202ENST00000433454 FBXO41Q8TF61 875 aa13.09□□□□□ -0.31
NEFM-202ENST00000433454 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
NEFM-202ENST00000433454 RABL6Q3YEC7 729 aaPredicted RBP13.08□□□□□ -0.32
NEFM-202ENST00000433454 JARID2Q92833 1246 aaPredicted RBP13.08□□□□□ -0.32
NEFM-202ENST00000433454 BCL11AQ9H165 835 aa13.08□□□□□ -0.32
NEFM-202ENST00000433454 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
NEFM-202ENST00000433454 NOP58Q9Y2X3 529 aaKnown RBP13.08□□□□□ -0.32
NEFM-202ENST00000433454 EPHA10Q5JZY3 1008 aa13.08□□□□□ -0.32
NEFM-202ENST00000433454 BMP2KLQ5H9B9 411 aa13.07□□□□□ -0.32
NEFM-202ENST00000433454 PLEKHM2Q8IWE5 1019 aa13.07□□□□□ -0.32
NEFM-202ENST00000433454 KIF1BPQ96EK5 621 aa13.07□□□□□ -0.32
NEFM-202ENST00000433454 KCNQ4P56696 695 aa13.07□□□□□ -0.32
NEFM-202ENST00000433454 OS9Q13438 667 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms