RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 SRGNP10124 158 aa20.11■□□□□ 0.81
CSNK1E-208ENST00000431611 HTRA3P83110 453 aa20.11■□□□□ 0.81
CSNK1E-208ENST00000431611 NBPF5PQ86XG9 351 aaPredicted RBP20.11■□□□□ 0.81
CSNK1E-208ENST00000431611 TNRC6CQ9HCJ0 1690 aaKnown RBP20.1■□□□□ 0.81
CSNK1E-208ENST00000431611 NBPF26B4DH59 902 aa20.1■□□□□ 0.81
CSNK1E-208ENST00000431611 DPY19L2Q6NUT2 758 aa20.1■□□□□ 0.81
CSNK1E-208ENST00000431611 NBPF10Q6P3W6 841 aaKnown RBP20.1■□□□□ 0.81
CSNK1E-208ENST00000431611 NBPF15Q8N660 670 aa20.1■□□□□ 0.81
CSNK1E-208ENST00000431611 MASTLQ96GX5 879 aa20.1■□□□□ 0.81
CSNK1E-208ENST00000431611 MIS18AQ9NYP9 233 aa20.1■□□□□ 0.81
CSNK1E-208ENST00000431611 ANKRD31Q8N7Z5 1873 aa20.09■□□□□ 0.81
CSNK1E-208ENST00000431611 ERFEQ4G0M1 354 aa20.09■□□□□ 0.81
CSNK1E-208ENST00000431611 PRPF40BQ6NWY9 871 aaKnown RBP20.09■□□□□ 0.81
CSNK1E-208ENST00000431611 KLRG1Q96E93 195 aa20.08■□□□□ 0.81
CSNK1E-208ENST00000431611 TAOK3Q9H2K8 898 aa20.08■□□□□ 0.81
CSNK1E-208ENST00000431611 NIP7Q9Y221 180 aaKnown RBP eCLIP20.08■□□□□ 0.81
CSNK1E-208ENST00000431611 LTBP3Q9NS15 1303 aa20.07■□□□□ 0.8
CSNK1E-208ENST00000431611 RGL2O15211 777 aa20.07■□□□□ 0.8
CSNK1E-208ENST00000431611 SOGA3Q5TF21 947 aa20.07■□□□□ 0.8
CSNK1E-208ENST00000431611 TPTE2Q6XPS3 522 aa20.07■□□□□ 0.8
CSNK1E-208ENST00000431611 PNISRQ8TF01 805 aaKnown RBP20.07■□□□□ 0.8
CSNK1E-208ENST00000431611 COL11A2P13942 1736 aaPredicted RBP20.06■□□□□ 0.8
CSNK1E-208ENST00000431611 BCORQ6W2J9 1755 aa20.06■□□□□ 0.8
CSNK1E-208ENST00000431611 WDR90Q96KV7 1748 aa20.05■□□□□ 0.8
CSNK1E-208ENST00000431611 FAM177BA6PVY3 158 aa20.05■□□□□ 0.8
CSNK1E-208ENST00000431611 PLEKHF1Q96S99 279 aa20.05■□□□□ 0.8
CSNK1E-208ENST00000431611 POTECB2RU33 542 aa20.04■□□□□ 0.8
CSNK1E-208ENST00000431611 NPR1P16066 1061 aa20.04■□□□□ 0.8
CSNK1E-208ENST00000431611 HLFQ16534 295 aa20.04■□□□□ 0.8
CSNK1E-208ENST00000431611 TIAM2Q8IVF5 1701 aa20.03■□□□□ 0.8
CSNK1E-208ENST00000431611 KLRG2A4D1S0 409 aaPredicted RBP20.03■□□□□ 0.8
CSNK1E-208ENST00000431611 NFE2L2Q16236 605 aa20.03■□□□□ 0.8
CSNK1E-208ENST00000431611 C7orf43Q8WVR3 580 aa20.03■□□□□ 0.8
CSNK1E-208ENST00000431611 PNNQ9H307 717 aaKnown RBP20.03■□□□□ 0.8
CSNK1E-208ENST00000431611 GTF2E1P29083 439 aaPredicted RBP20.02■□□□□ 0.8
CSNK1E-208ENST00000431611 CCDC93Q567U6 631 aa20.02■□□□□ 0.8
CSNK1E-208ENST00000431611 NGEFQ8N5V2 710 aa20.02■□□□□ 0.8
CSNK1E-208ENST00000431611 JMYQ8N9B5 988 aa20.02■□□□□ 0.8
CSNK1E-208ENST00000431611 MAPK8IP3Q9UPT6 1336 aa20.02■□□□□ 0.79
CSNK1E-208ENST00000431611 EIF4A1P60842 406 aaKnown RBP20.01■□□□□ 0.79
CSNK1E-208ENST00000431611 THUMPD2Q9BTF0 503 aaKnown RBP20.01■□□□□ 0.79
CSNK1E-208ENST00000431611 RRP7AQ9Y3A4 280 aaKnown RBP20.01■□□□□ 0.79
CSNK1E-208ENST00000431611 DDNO94850 711 aaPredicted RBP20■□□□□ 0.79
CSNK1E-208ENST00000431611 SLX4Q8IY92 1834 aa19.99■□□□□ 0.79
CSNK1E-208ENST00000431611 FER1L6Q2WGJ9 1857 aa19.99■□□□□ 0.79
CSNK1E-208ENST00000431611 ERVV-1B6SEH8 477 aa19.99■□□□□ 0.79
CSNK1E-208ENST00000431611 MYL6BP14649 208 aa19.98■□□□□ 0.79
CSNK1E-208ENST00000431611 ALDH1B1P30837 517 aa19.98■□□□□ 0.79
CSNK1E-208ENST00000431611 FKBP4Q02790 459 aaKnown RBP eCLIP19.98■□□□□ 0.79
CSNK1E-208ENST00000431611 KIF6Q6ZMV9 814 aa19.98■□□□□ 0.79
CSNK1E-208ENST00000431611 NYXQ9GZU5 481 aa19.98■□□□□ 0.79
CSNK1E-208ENST00000431611 MAP3K15Q6ZN16 1313 aa19.98■□□□□ 0.79
CSNK1E-208ENST00000431611 CCDC88AQ3V6T2 1871 aa19.97■□□□□ 0.79
CSNK1E-208ENST00000431611 TTLL7Q6ZT98 887 aa19.97■□□□□ 0.79
CSNK1E-208ENST00000431611 RTKN2Q8IZC4 609 aa19.97■□□□□ 0.79
CSNK1E-208ENST00000431611 OLFM4Q6UX06 510 aa19.96■□□□□ 0.79
CSNK1E-208ENST00000431611 ZNF277Q9NRM2 450 aaPredicted RBP19.96■□□□□ 0.79
CSNK1E-208ENST00000431611 CHADLQ6NUI6 762 aa19.95■□□□□ 0.78
CSNK1E-208ENST00000431611 NUTM1Q86Y26 1132 aa19.95■□□□□ 0.78
CSNK1E-208ENST00000431611 ZBTB3Q9H5J0 574 aa19.95■□□□□ 0.78
CSNK1E-208ENST00000431611 LAMB4A4D0S4 1761 aa19.94■□□□□ 0.78
CSNK1E-208ENST00000431611 IQCA1LA6NCM1 817 aa19.94■□□□□ 0.78
CSNK1E-208ENST00000431611 GPTP24298 496 aa19.94■□□□□ 0.78
CSNK1E-208ENST00000431611 TSPYL4Q9UJ04 414 aa19.94■□□□□ 0.78
CSNK1E-208ENST00000431611 ABCC12Q96J65 1359 aa19.94■□□□□ 0.78
CSNK1E-208ENST00000431611 KDM3BQ7LBC6 1761 aa19.93■□□□□ 0.78
CSNK1E-208ENST00000431611 ARFGEF2Q9Y6D5 1785 aa19.93■□□□□ 0.78
CSNK1E-208ENST00000431611 POTEIP0CG38 1075 aa19.93■□□□□ 0.78
CSNK1E-208ENST00000431611 POTEJP0CG39 1038 aa19.93■□□□□ 0.78
CSNK1E-208ENST00000431611 RIPK4P57078 832 aa19.93■□□□□ 0.78
CSNK1E-208ENST00000431611 RALBP1Q15311 655 aa19.93■□□□□ 0.78
CSNK1E-208ENST00000431611 CRY2Q49AN0 593 aa19.93■□□□□ 0.78
CSNK1E-208ENST00000431611 L3MBTL3Q96JM7 780 aaPredicted RBP19.93■□□□□ 0.78
CSNK1E-208ENST00000431611 DICER1Q9UPY3 1922 aaKnown RBP19.93■□□□□ 0.78
CSNK1E-208ENST00000431611 ERBB4Q15303 1308 aa19.93■□□□□ 0.78
CSNK1E-208ENST00000431611 SYNE4Q8N205 404 aa19.92■□□□□ 0.78
CSNK1E-208ENST00000431611 CACNA1SQ13698 1873 aa19.91■□□□□ 0.78
CSNK1E-208ENST00000431611 IARSP41252 1262 aaKnown RBP19.91■□□□□ 0.78
CSNK1E-208ENST00000431611 SUSD4Q5VX71 490 aa19.91■□□□□ 0.78
CSNK1E-208ENST00000431611 RPGRQ92834 1020 aaKnown RBP19.91■□□□□ 0.78
CSNK1E-208ENST00000431611 TAF1DQ9H5J8 278 aaPredicted RBP19.91■□□□□ 0.78
CSNK1E-208ENST00000431611 UBN2Q6ZU65 1347 aa19.91■□□□□ 0.78
CSNK1E-208ENST00000431611 DLG5Q8TDM6 1919 aa19.9■□□□□ 0.78
CSNK1E-208ENST00000431611 EIF2S2P20042 333 aaKnown RBP19.9■□□□□ 0.78
CSNK1E-208ENST00000431611 CC2D2BQ6DHV5 1058 aa19.9■□□□□ 0.78
CSNK1E-208ENST00000431611 GIGYF2Q6Y7W6 1299 aaKnown RBP19.9■□□□□ 0.78
CSNK1E-208ENST00000431611 ZNF34Q8IZ26 560 aa19.9■□□□□ 0.78
CSNK1E-208ENST00000431611 ZNF541Q9H0D2 1346 aa19.9■□□□□ 0.78
CSNK1E-208ENST00000431611 IBTKQ9P2D0 1353 aaPredicted RBP19.9■□□□□ 0.78
CSNK1E-208ENST00000431611 HOXA10P31260 410 aaPredicted RBP19.89■□□□□ 0.77
CSNK1E-208ENST00000431611 LDHDQ86WU2 507 aa19.89■□□□□ 0.77
CSNK1E-208ENST00000431611 BABAM1Q9NWV8 329 aa19.89■□□□□ 0.77
CSNK1E-208ENST00000431611 NTSR2O95665 410 aa19.88■□□□□ 0.77
CSNK1E-208ENST00000431611 TMPOP42166 694 aaKnown RBP19.88■□□□□ 0.77
CSNK1E-208ENST00000431611 LMOD3Q0VAK6 560 aa19.88■□□□□ 0.77
CSNK1E-208ENST00000431611 COL13A1Q5TAT6 717 aaPredicted RBP19.88■□□□□ 0.77
CSNK1E-208ENST00000431611 PPP1R42Q7Z4L9 355 aa19.88■□□□□ 0.77
CSNK1E-208ENST00000431611 PSMD1Q99460 953 aa19.88■□□□□ 0.77
CSNK1E-208ENST00000431611 CREBZFQ9NS37 354 aa19.88■□□□□ 0.77
CSNK1E-208ENST00000431611 HACL1Q9UJ83 578 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms