RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 ANKRD13DQ6ZTN6 518 aa12.44□□□□□ -0.42
RPE-206ENST00000429921 NBPF15Q8N660 670 aa12.44□□□□□ -0.42
RPE-206ENST00000429921 COL5A2P05997 1499 aaPredicted RBP12.44□□□□□ -0.42
RPE-206ENST00000429921 DDX58O95786 925 aaKnown RBP12.43□□□□□ -0.42
RPE-206ENST00000429921 SYTL4Q96C24 671 aaPredicted RBP12.43□□□□□ -0.42
RPE-206ENST00000429921 CCDC8Q9H0W5 538 aaPredicted RBP12.43□□□□□ -0.42
RPE-206ENST00000429921 ZBTB3Q9H5J0 574 aa12.43□□□□□ -0.42
RPE-206ENST00000429921 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.43□□□□□ -0.421e-7■■□□□ 14.3
RPE-206ENST00000429921 NUTM2BA6NNL0 878 aaPredicted RBP12.43□□□□□ -0.42
RPE-206ENST00000429921 NEURL1BA8MQ27 555 aa12.43□□□□□ -0.42
RPE-206ENST00000429921 NUTM2EB1AL46 878 aaPredicted RBP12.43□□□□□ -0.42
RPE-206ENST00000429921 HSP90AA1P07900 732 aaKnown RBP12.43□□□□□ -0.42
RPE-206ENST00000429921 PIP4K2BP78356 416 aa12.43□□□□□ -0.42
RPE-206ENST00000429921 UBE3BQ7Z3V4 1068 aa12.43□□□□□ -0.42
RPE-206ENST00000429921 NUTM2AQ8IVF1 878 aaPredicted RBP12.43□□□□□ -0.42
RPE-206ENST00000429921 LINS1Q8NG48 757 aa12.43□□□□□ -0.42
RPE-206ENST00000429921 PXDNLA1KZ92 1463 aa12.42□□□□□ -0.42
RPE-206ENST00000429921 ANO2Q9NQ90 1003 aa12.42□□□□□ -0.42
RPE-206ENST00000429921 TLR7Q9NYK1 1049 aaKnown RBP12.42□□□□□ -0.42
RPE-206ENST00000429921 ASAP1Q9ULH1 1129 aa12.42□□□□□ -0.42
RPE-206ENST00000429921 CHMP3Q9Y3E7 222 aa12.42□□□□□ -0.42
RPE-206ENST00000429921 OVOS2A0A0G2JMS6 1433 aa12.42□□□□□ -0.42
RPE-206ENST00000429921 DTNBO60941 627 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 CASC1Q6TDU7 716 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 LRP10Q7Z4F1 713 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 CARD10Q9BWT7 1032 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 PALD1Q9ULE6 856 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 NDUFB9Q9Y6M9 179 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 PCDH11XQ9BZA7 1347 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 PCDH11YQ9BZA8 1340 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 ERC2O15083 957 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 ALDH1L1O75891 902 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 CHMLP26374 656 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 NEXNQ0ZGT2 675 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 GCKRQ14397 625 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 KIF1BPQ96EK5 621 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 CCDC85AQ96PX6 553 aaPredicted RBP12.41□□□□□ -0.42
RPE-206ENST00000429921 OSBPL3Q9H4L5 887 aa12.41□□□□□ -0.42
RPE-206ENST00000429921 AACSQ86V21 672 aa12.4□□□□□ -0.42
RPE-206ENST00000429921 PI4K2BQ8TCG2 481 aa12.4□□□□□ -0.42
RPE-206ENST00000429921 METTL22Q9BUU2 404 aaPredicted RBP12.4□□□□□ -0.42
RPE-206ENST00000429921 SASH1O94885 1247 aa12.4□□□□□ -0.42
RPE-206ENST00000429921 ESYT1Q9BSJ8 1104 aa12.4□□□□□ -0.42
RPE-206ENST00000429921 A0A087WZG4 1122 aa12.39□□□□□ -0.43
RPE-206ENST00000429921 LARP6Q9BRS8 491 aaKnown RBP12.39□□□□□ -0.43
RPE-206ENST00000429921 RAB11FIP3O75154 756 aa12.39□□□□□ -0.43
RPE-206ENST00000429921 CWC27Q6UX04 472 aaKnown RBP12.39□□□□□ -0.43
RPE-206ENST00000429921 GZF1Q9H116 711 aaPredicted RBP12.39□□□□□ -0.43
RPE-206ENST00000429921 PIGBQ92521 554 aa12.38□□□□□ -0.43
RPE-206ENST00000429921 EDC3Q96F86 508 aaKnown RBP12.38□□□□□ -0.43
RPE-206ENST00000429921 CHMP4AQ9BY43 222 aa12.38□□□□□ -0.43
RPE-206ENST00000429921 STAP2Q9UGK3 403 aa12.38□□□□□ -0.43
RPE-206ENST00000429921 ADAMTS7Q9UKP4 1686 aa12.38□□□□□ -0.43
RPE-206ENST00000429921 IFIT2P09913 472 aaKnown RBP12.38□□□□□ -0.43
RPE-206ENST00000429921 G3BP1Q13283 466 aaKnown RBP eCLIP12.38□□□□□ -0.43
RPE-206ENST00000429921 EAF2Q96CJ1 260 aaPredicted RBP12.38□□□□□ -0.43
RPE-206ENST00000429921 TMOD3Q9NYL9 352 aa12.38□□□□□ -0.43
RPE-206ENST00000429921 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
RPE-206ENST00000429921 K7ELQ4 463 aaPredicted RBP12.37□□□□□ -0.43
RPE-206ENST00000429921 CHGBP05060 677 aa12.37□□□□□ -0.43
RPE-206ENST00000429921 FOXD4L5Q5VV16 416 aaPredicted RBP12.37□□□□□ -0.43
RPE-206ENST00000429921 DNAJC10Q8IXB1 793 aa12.37□□□□□ -0.43
RPE-206ENST00000429921 CLASRPQ8N2M8 674 aaKnown RBP12.37□□□□□ -0.43
RPE-206ENST00000429921 FOXD4L4Q8WXT5 416 aaPredicted RBP12.37□□□□□ -0.43
RPE-206ENST00000429921 ACSBG1Q96GR2 724 aa12.37□□□□□ -0.43
RPE-206ENST00000429921 UPF3BQ9BZI7 483 aaKnown RBP12.37□□□□□ -0.43
RPE-206ENST00000429921 BOLA2Q9H3K6 86 aa12.37□□□□□ -0.43
RPE-206ENST00000429921 N4BP2Q86UW6 1770 aaPredicted RBP12.36□□□□□ -0.43
RPE-206ENST00000429921 AK9Q5TCS8 1911 aa12.36□□□□□ -0.43
RPE-206ENST00000429921 PKD1L3Q7Z443 1732 aa12.36□□□□□ -0.43
RPE-206ENST00000429921 SYNE4Q8N205 404 aa12.36□□□□□ -0.43
RPE-206ENST00000429921 SNX21Q969T3 373 aa12.36□□□□□ -0.43
RPE-206ENST00000429921 ZNF594Q96JF6 807 aaPredicted RBP12.36□□□□□ -0.43
RPE-206ENST00000429921 CHAMP1Q96JM3 812 aa12.36□□□□□ -0.43
RPE-206ENST00000429921 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
RPE-206ENST00000429921 REC8O95072 547 aa12.36□□□□□ -0.43
RPE-206ENST00000429921 NEK4P51957 841 aa12.36□□□□□ -0.43
RPE-206ENST00000429921 LMBR1LQ6UX01 489 aa12.36□□□□□ -0.43
RPE-206ENST00000429921 CHMP5Q9NZZ3 219 aa12.36□□□□□ -0.43
RPE-206ENST00000429921 ERVV-2B6SEH9 535 aa12.35□□□□□ -0.43
RPE-206ENST00000429921 ZGPATQ8N5A5 531 aaKnown RBP12.35□□□□□ -0.43
RPE-206ENST00000429921 ABCA3Q99758 1704 aa12.35□□□□□ -0.43
RPE-206ENST00000429921 CPA1P15085 419 aa12.35□□□□□ -0.43
RPE-206ENST00000429921 TFCP2Q12800 502 aa12.35□□□□□ -0.43
RPE-206ENST00000429921 PKP1Q13835 747 aa12.35□□□□□ -0.43
RPE-206ENST00000429921 SSFA2P28290 1259 aa12.34□□□□□ -0.43
RPE-206ENST00000429921 MTX1Q13505 466 aa12.34□□□□□ -0.43
RPE-206ENST00000429921 GSE1Q14687 1217 aa12.34□□□□□ -0.43
RPE-206ENST00000429921 PLBD2Q8NHP8 589 aa12.34□□□□□ -0.43
RPE-206ENST00000429921 GPTP24298 496 aa12.34□□□□□ -0.43
RPE-206ENST00000429921 ATG3Q9NT62 314 aa12.34□□□□□ -0.43
RPE-206ENST00000429921 PRIM1P49642 420 aaKnown RBP12.33□□□□□ -0.44
RPE-206ENST00000429921 RABEP1Q15276 862 aa12.33□□□□□ -0.44
RPE-206ENST00000429921 HSP90AB4PQ58FF6 505 aa12.33□□□□□ -0.44
RPE-206ENST00000429921 TNPO1Q92973 898 aaKnown RBP12.33□□□□□ -0.44
RPE-206ENST00000429921 UTYO14607 1347 aa12.33□□□□□ -0.44
RPE-206ENST00000429921 MRC1P22897 1456 aa12.33□□□□□ -0.44
RPE-206ENST00000429921 NKX1-1Q15270 411 aaPredicted RBP12.33□□□□□ -0.44
RPE-206ENST00000429921 SLFNL1Q499Z3 407 aa12.33□□□□□ -0.44
RPE-206ENST00000429921 FAM227BQ96M60 508 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms