RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 CLEC17AQ6ZS10 378 aa16.26■□□□□ 0.19
SGMS1-203ENST00000429490 RUFY3Q7L099 469 aa16.26■□□□□ 0.19
SGMS1-203ENST00000429490 TYRO3Q06418 890 aa16.26■□□□□ 0.19
SGMS1-203ENST00000429490 MYRIPQ8NFW9 859 aa16.26■□□□□ 0.19
SGMS1-203ENST00000429490 KLHDC4Q8TBB5 520 aa16.26■□□□□ 0.19
SGMS1-203ENST00000429490 FAM227BQ96M60 508 aa16.26■□□□□ 0.19
SGMS1-203ENST00000429490 NDUFB9Q9Y6M9 179 aa16.26■□□□□ 0.19
SGMS1-203ENST00000429490 RIOK3O14730 519 aaKnown RBP16.26■□□□□ 0.19
SGMS1-203ENST00000429490 PIP4K2AP48426 406 aaPredicted RBP16.26■□□□□ 0.19
SGMS1-203ENST00000429490 PTH1RQ03431 593 aa16.26■□□□□ 0.19
SGMS1-203ENST00000429490 ADCK5Q3MIX3 580 aa16.26■□□□□ 0.19
SGMS1-203ENST00000429490 LARGE1O95461 756 aa16.25■□□□□ 0.19
SGMS1-203ENST00000429490 FAM177A1Q8N128 213 aaPredicted RBP16.25■□□□□ 0.19
SGMS1-203ENST00000429490 U2AF2P26368 475 aaKnown RBP eCLIP16.25■□□□□ 0.192e-6■■■□□ 18.1
SGMS1-203ENST00000429490 LRMPQ12912 555 aa16.25■□□□□ 0.19
SGMS1-203ENST00000429490 ERC1Q8IUD2 1116 aa16.25■□□□□ 0.19
SGMS1-203ENST00000429490 CREBRFQ8IUR6 639 aa16.25■□□□□ 0.19
SGMS1-203ENST00000429490 CCDC94Q9BW85 323 aaPredicted RBP16.25■□□□□ 0.19
SGMS1-203ENST00000429490 CPLX1O14810 134 aa16.25■□□□□ 0.19
SGMS1-203ENST00000429490 CUL4AQ13619 759 aa16.25■□□□□ 0.19
SGMS1-203ENST00000429490 ESCO1Q5FWF5 840 aa16.25■□□□□ 0.19
SGMS1-203ENST00000429490 FAM200AQ8TCP9 573 aa16.25■□□□□ 0.19
SGMS1-203ENST00000429490 SCAND2PQ9GZW5 306 aaPredicted RBP16.25■□□□□ 0.19
SGMS1-203ENST00000429490 RAD50Q92878 1312 aa16.25■□□□□ 0.19
SGMS1-203ENST00000429490 PNPLA6Q8IY17 1366 aa16.25■□□□□ 0.19
SGMS1-203ENST00000429490 GLI2P10070 1586 aa16.24■□□□□ 0.19
SGMS1-203ENST00000429490 IL25Q9H293 177 aa16.24■□□□□ 0.19
SGMS1-203ENST00000429490 PYCARDQ9ULZ3 195 aa16.24■□□□□ 0.19
SGMS1-203ENST00000429490 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
SGMS1-203ENST00000429490 NMIQ13287 307 aaPredicted RBP16.24■□□□□ 0.19
SGMS1-203ENST00000429490 RAB11FIP4Q86YS3 637 aa16.24■□□□□ 0.19
SGMS1-203ENST00000429490 YEATS2Q9ULM3 1422 aa16.24■□□□□ 0.19
SGMS1-203ENST00000429490 TERF1P54274 439 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 TAF7LQ5H9L4 462 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 CDC37L1Q7L3B6 337 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 ERICH4A6NGS2 130 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 LIG1P18858 919 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 TPM4P67936 248 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 ANKRD1Q15327 319 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 WASHC4Q2M389 1173 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 ISM2Q6H9L7 571 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 EDC3Q96F86 508 aaKnown RBP16.23■□□□□ 0.19
SGMS1-203ENST00000429490 OSBPL3Q9H4L5 887 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 LGR6Q9HBX8 967 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 TOMM22Q9NS69 142 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 NLRP2Q9NX02 1062 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 KCNQ3O43525 872 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 BCL2L12Q9HB09 334 aa16.23■□□□□ 0.19
SGMS1-203ENST00000429490 BIN1O00499 593 aa16.22■□□□□ 0.19
SGMS1-203ENST00000429490 CREB3L3Q68CJ9 461 aa16.22■□□□□ 0.19
SGMS1-203ENST00000429490 IL17REQ8NFR9 667 aa16.22■□□□□ 0.19
SGMS1-203ENST00000429490 ERCC4Q92889 916 aaPredicted RBP16.22■□□□□ 0.19
SGMS1-203ENST00000429490 EVI5LQ96CN4 794 aa16.22■□□□□ 0.19
SGMS1-203ENST00000429490 ME3Q16798 604 aa16.22■□□□□ 0.19
SGMS1-203ENST00000429490 PLEKHO1Q53GL0 409 aaPredicted RBP16.22■□□□□ 0.19
SGMS1-203ENST00000429490 LARP1Q6PKG0 1096 aaKnown RBP16.22■□□□□ 0.19
SGMS1-203ENST00000429490 LRRC59Q96AG4 307 aaKnown RBP16.22■□□□□ 0.19
SGMS1-203ENST00000429490 HIP1O00291 1037 aa16.21■□□□□ 0.19
SGMS1-203ENST00000429490 BRF1Q92994 677 aa16.21■□□□□ 0.19
SGMS1-203ENST00000429490 CCDC85AQ96PX6 553 aaPredicted RBP16.21■□□□□ 0.19
SGMS1-203ENST00000429490 METP08581 1390 aa16.21■□□□□ 0.19
SGMS1-203ENST00000429490 TTC5Q8N0Z6 440 aa16.21■□□□□ 0.19
SGMS1-203ENST00000429490 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.21■□□□□ 0.19
SGMS1-203ENST00000429490 PRR36Q9H6K5 1346 aa16.21■□□□□ 0.19
SGMS1-203ENST00000429490 APPP05067 770 aa16.2■□□□□ 0.18
SGMS1-203ENST00000429490 PTPN14Q15678 1187 aa16.2■□□□□ 0.18
SGMS1-203ENST00000429490 DDX46Q7L014 1031 aaKnown RBP16.2■□□□□ 0.18
SGMS1-203ENST00000429490 ZBTB9Q96C00 473 aa16.2■□□□□ 0.18
SGMS1-203ENST00000429490 A0A087WWV3 80 aa16.2■□□□□ 0.18
SGMS1-203ENST00000429490 STK38Q15208 465 aa16.2■□□□□ 0.18
SGMS1-203ENST00000429490 DBF4Q9UBU7 674 aaPredicted RBP16.2■□□□□ 0.18
SGMS1-203ENST00000429490 MTMR6Q9Y217 621 aa16.2■□□□□ 0.18
SGMS1-203ENST00000429490 CHST3Q7LGC8 479 aa16.2■□□□□ 0.18
SGMS1-203ENST00000429490 TTC6Q86TZ1 520 aa16.2■□□□□ 0.18
SGMS1-203ENST00000429490 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
SGMS1-203ENST00000429490 KIAA0232Q92628 1395 aa16.2■□□□□ 0.18
SGMS1-203ENST00000429490 SYNE3Q6ZMZ3 975 aa16.19■□□□□ 0.18
SGMS1-203ENST00000429490 NRBP1Q9UHY1 535 aa16.19■□□□□ 0.18
SGMS1-203ENST00000429490 KIF24Q5T7B8 1368 aa16.19■□□□□ 0.18
SGMS1-203ENST00000429490 ADGRB3O60242 1522 aa16.19■□□□□ 0.18
SGMS1-203ENST00000429490 ATP2B1P20020 1258 aa16.19■□□□□ 0.18
SGMS1-203ENST00000429490 SLC39A6Q13433 755 aa16.19■□□□□ 0.18
SGMS1-203ENST00000429490 MYD88Q99836 296 aa16.19■□□□□ 0.18
SGMS1-203ENST00000429490 CFAP45Q9UL16 551 aa16.19■□□□□ 0.18
SGMS1-203ENST00000429490 MED14O60244 1454 aa16.19■□□□□ 0.18
SGMS1-203ENST00000429490 PPRC1Q5VV67 1664 aaKnown RBP16.19■□□□□ 0.18
SGMS1-203ENST00000429490 ATP5J2-PTCD1G3V325 749 aa16.19■□□□□ 0.18
SGMS1-203ENST00000429490 JAK2O60674 1132 aa16.19■□□□□ 0.18
SGMS1-203ENST00000429490 PTCD1O75127 700 aaKnown RBP16.19■□□□□ 0.18
SGMS1-203ENST00000429490 CCDC171Q6TFL3 1326 aa16.18■□□□□ 0.18
SGMS1-203ENST00000429490 VPS53Q5VIR6 699 aa16.18■□□□□ 0.18
SGMS1-203ENST00000429490 SSH3Q8TE77 659 aa16.18■□□□□ 0.18
SGMS1-203ENST00000429490 DDX19AQ9NUU7 478 aaKnown RBP16.18■□□□□ 0.18
SGMS1-203ENST00000429490 CGNQ9P2M7 1197 aaKnown RBP16.18■□□□□ 0.18
SGMS1-203ENST00000429490 ZC3H6P61129 1189 aaKnown RBP16.18■□□□□ 0.18
SGMS1-203ENST00000429490 FKBP4Q02790 459 aaKnown RBP eCLIP16.18■□□□□ 0.18
SGMS1-203ENST00000429490 CCDC129Q6ZRS4 1044 aa16.18■□□□□ 0.18
SGMS1-203ENST00000429490 RAPGEF4Q8WZA2 1011 aa16.18■□□□□ 0.18
SGMS1-203ENST00000429490 TRERF1Q96PN7 1200 aa16.18■□□□□ 0.18
SGMS1-203ENST00000429490 CBX8Q9HC52 389 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms