RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 KIF20AO95235 890 aa12.75□□□□□ -0.37
ATP2C1-204ENST00000428331 CPA1P15085 419 aa12.75□□□□□ -0.37
ATP2C1-204ENST00000428331 DDX54Q8TDD1 881 aaKnown RBP12.75□□□□□ -0.37
ATP2C1-204ENST00000428331 PIK3C2BO00750 1634 aa12.75□□□□□ -0.37
ATP2C1-204ENST00000428331 NECAB1Q8N987 351 aa12.75□□□□□ -0.37
ATP2C1-204ENST00000428331 MTMR6Q9Y217 621 aa12.75□□□□□ -0.37
ATP2C1-204ENST00000428331 PAXBP1Q9Y5B6 917 aa12.75□□□□□ -0.37
ATP2C1-204ENST00000428331 MAP2P11137 1827 aaKnown RBP12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 CAVIN2O95810 425 aa12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 ZNF165P49910 485 aa12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 DNAAF4Q8WXU2 420 aa12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 FSD1Q9BTV5 496 aa12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 ARHGEF10O15013 1369 aa12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 RASEFQ8IZ41 740 aa12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 EVI5LQ96CN4 794 aa12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 DACT1Q9NYF0 836 aa12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 NAP1L2Q9ULW6 460 aaPredicted RBP12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 TM6SF1Q9BZW5 370 aa12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 CGNQ9P2M7 1197 aaKnown RBP12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 CCDC73Q6ZRK6 1079 aa12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 SIRT1Q96EB6 747 aa12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 LSG1Q9H089 658 aaKnown RBP12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 TFIP11Q9UBB9 837 aaKnown RBP12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 NPHP3Q7Z494 1330 aa12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 KIF20BQ96Q89 1820 aa12.74□□□□□ -0.37
ATP2C1-204ENST00000428331 ANO6Q4KMQ2 910 aa12.73□□□□□ -0.37
ATP2C1-204ENST00000428331 AACSQ86V21 672 aa12.73□□□□□ -0.37
ATP2C1-204ENST00000428331 CLIP2Q9UDT6 1046 aa12.73□□□□□ -0.37
ATP2C1-204ENST00000428331 FLT4P35916 1363 aa12.73□□□□□ -0.37
ATP2C1-204ENST00000428331 EYA1Q99502 592 aa12.73□□□□□ -0.37
ATP2C1-204ENST00000428331 PYCARDQ9ULZ3 195 aa12.73□□□□□ -0.37
ATP2C1-204ENST00000428331 SALL3Q9BXA9 1300 aa12.73□□□□□ -0.37
ATP2C1-204ENST00000428331 LUZP1Q86V48 1076 aa12.73□□□□□ -0.37
ATP2C1-204ENST00000428331 CFAP45Q9UL16 551 aa12.73□□□□□ -0.37
ATP2C1-204ENST00000428331 SMTNL1A8MU46 457 aa12.73□□□□□ -0.37
ATP2C1-204ENST00000428331 HYPKQ9NX55 129 aa12.72□□□□□ -0.37
ATP2C1-204ENST00000428331 NEMFO60524 1076 aa12.72□□□□□ -0.37
ATP2C1-204ENST00000428331 STK3Q13188 491 aa12.72□□□□□ -0.37
ATP2C1-204ENST00000428331 TTC14Q96N46 770 aa12.72□□□□□ -0.37
ATP2C1-204ENST00000428331 BABAM1Q9NWV8 329 aa12.72□□□□□ -0.37
ATP2C1-204ENST00000428331 RBM8AQ9Y5S9 174 aaKnown RBP12.72□□□□□ -0.37
ATP2C1-204ENST00000428331 PI4KAP2A4QPH2 592 aa12.72□□□□□ -0.37
ATP2C1-204ENST00000428331 TPM4P67936 248 aa12.72□□□□□ -0.37
ATP2C1-204ENST00000428331 PDE4CQ08493 712 aa12.72□□□□□ -0.37
ATP2C1-204ENST00000428331 PI4KAP1Q8N8J0 262 aa12.72□□□□□ -0.37
ATP2C1-204ENST00000428331 PRDM4Q9UKN5 801 aa12.72□□□□□ -0.37
ATP2C1-204ENST00000428331 TTC21AQ8NDW8 1320 aa12.72□□□□□ -0.37
ATP2C1-204ENST00000428331 TAF3Q5VWG9 929 aa12.71□□□□□ -0.37
ATP2C1-204ENST00000428331 CDK11BP21127 795 aaKnown RBP12.71□□□□□ -0.37
ATP2C1-204ENST00000428331 KRT32Q14532 448 aa12.71□□□□□ -0.37
ATP2C1-204ENST00000428331 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.71□□□□□ -0.37
ATP2C1-204ENST00000428331 OGFRQ9NZT2 677 aa12.71□□□□□ -0.37
ATP2C1-204ENST00000428331 EID1Q9Y6B2 187 aa12.71□□□□□ -0.37
ATP2C1-204ENST00000428331 KINO60870 393 aaKnown RBP12.71□□□□□ -0.38
ATP2C1-204ENST00000428331 U2AF2P26368 475 aaKnown RBP eCLIP12.71□□□□□ -0.385e-6■■■□□ 19.2
ATP2C1-204ENST00000428331 JARID2Q92833 1246 aaPredicted RBP12.71□□□□□ -0.38
ATP2C1-204ENST00000428331 RPAP1Q9BWH6 1393 aaPredicted RBP12.71□□□□□ -0.38
ATP2C1-204ENST00000428331 PTPN14Q15678 1187 aa12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 CHMP4CQ96CF2 233 aa12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 PHAXQ9H814 394 aaKnown RBP12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 CRB1P82279 1406 aa12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 DDX58O95786 925 aaKnown RBP12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 NAT10Q9H0A0 1025 aaKnown RBP12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 ZSWIM6Q9HCJ5 1215 aa12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 CCDC171Q6TFL3 1326 aa12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 PLEKHG3A1L390 1219 aa12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 CREB3L3Q68CJ9 461 aa12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 PI4K2BQ8TCG2 481 aa12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 DLC1Q96QB1 1528 aa12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 TTC6Q86TZ1 520 aa12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 CBX8Q9HC52 389 aa12.7□□□□□ -0.38
ATP2C1-204ENST00000428331 CTAGE5O15320 804 aa12.69□□□□□ -0.38
ATP2C1-204ENST00000428331 ME3Q16798 604 aa12.69□□□□□ -0.38
ATP2C1-204ENST00000428331 IL17RAQ96F46 866 aa12.69□□□□□ -0.38
ATP2C1-204ENST00000428331 SBNO1A3KN83 1393 aa12.69□□□□□ -0.38
ATP2C1-204ENST00000428331 SF3A1Q15459 793 aaKnown RBP12.69□□□□□ -0.38
ATP2C1-204ENST00000428331 CEP135Q66GS9 1140 aa12.69□□□□□ -0.38
ATP2C1-204ENST00000428331 FILIP1Q7Z7B0 1213 aa12.69□□□□□ -0.38
ATP2C1-204ENST00000428331 CCDC66A2RUB6 948 aa12.69□□□□□ -0.38
ATP2C1-204ENST00000428331 NUTM2GQ5VZR2 741 aa12.69□□□□□ -0.38
ATP2C1-204ENST00000428331 ZNF710Q8N1W2 664 aa12.69□□□□□ -0.38
ATP2C1-204ENST00000428331 METP08581 1390 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 MAP3K5Q99683 1374 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 LIG1P18858 919 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 ZNF75DP51815 510 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 CEBPZQ03701 1054 aaKnown RBP12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 FAM173BQ6P4H8 233 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 BCL11BQ9C0K0 894 aaPredicted RBP12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 DNAJC25Q9H1X3 360 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 ELP1O95163 1332 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 CLTCQ00610 1675 aaKnown RBP12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 KIF2AO00139 706 aaPredicted RBP12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 NBPF7P0C2Y1 421 aaPredicted RBP12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 HMG20BQ9P0W2 317 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 PRR36Q9H6K5 1346 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 DTNBO60941 627 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 LARGE1O95461 756 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 PTH1RQ03431 593 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 SDF4Q9BRK5 362 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms