RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 TTLL7Q6ZT98 887 aa12.77□□□□□ -0.37
HDAC9-210ENST00000428307 KLHDC4Q8TBB5 520 aa12.77□□□□□ -0.37
HDAC9-210ENST00000428307 SIL1Q9H173 461 aa12.77□□□□□ -0.37
HDAC9-210ENST00000428307 ASAP1Q9ULH1 1129 aa12.77□□□□□ -0.37
HDAC9-210ENST00000428307 ZNF330Q9Y3S2 320 aaPredicted RBP12.77□□□□□ -0.37
HDAC9-210ENST00000428307 C5P01031 1676 aa12.76□□□□□ -0.37
HDAC9-210ENST00000428307 CD2BP2O95400 341 aaKnown RBP12.76□□□□□ -0.37
HDAC9-210ENST00000428307 UBE3BQ7Z3V4 1068 aa12.76□□□□□ -0.37
HDAC9-210ENST00000428307 PIGBQ92521 554 aa12.76□□□□□ -0.37
HDAC9-210ENST00000428307 ERC2O15083 957 aa12.76□□□□□ -0.37
HDAC9-210ENST00000428307 FRAT2O75474 233 aaPredicted RBP12.76□□□□□ -0.37
HDAC9-210ENST00000428307 CLASRPQ8N2M8 674 aaKnown RBP12.76□□□□□ -0.37
HDAC9-210ENST00000428307 PLBD2Q8NHP8 589 aa12.76□□□□□ -0.37
HDAC9-210ENST00000428307 ANTXR1Q9H6X2 564 aa12.76□□□□□ -0.37
HDAC9-210ENST00000428307 A0A087WZG4 1122 aa12.75□□□□□ -0.37
HDAC9-210ENST00000428307 NUTM2BA6NNL0 878 aaPredicted RBP12.75□□□□□ -0.37
HDAC9-210ENST00000428307 NUTM2EB1AL46 878 aaPredicted RBP12.75□□□□□ -0.37
HDAC9-210ENST00000428307 NUTM2AQ8IVF1 878 aaPredicted RBP12.75□□□□□ -0.37
HDAC9-210ENST00000428307 SYTL4Q96C24 671 aaPredicted RBP12.75□□□□□ -0.37
HDAC9-210ENST00000428307 ZBTB3Q9H5J0 574 aa12.75□□□□□ -0.37
HDAC9-210ENST00000428307 EIF5BO60841 1220 aaKnown RBP12.74□□□□□ -0.37
HDAC9-210ENST00000428307 REC8O95072 547 aa12.74□□□□□ -0.37
HDAC9-210ENST00000428307 ABCA3Q99758 1704 aa12.74□□□□□ -0.37
HDAC9-210ENST00000428307 EXOC5O00471 708 aa12.74□□□□□ -0.37
HDAC9-210ENST00000428307 CHMLP26374 656 aa12.74□□□□□ -0.37
HDAC9-210ENST00000428307 G3BP1Q13283 466 aaKnown RBP eCLIP12.74□□□□□ -0.37
HDAC9-210ENST00000428307 PI4K2BQ8TCG2 481 aa12.74□□□□□ -0.37
HDAC9-210ENST00000428307 SNX21Q969T3 373 aa12.74□□□□□ -0.37
HDAC9-210ENST00000428307 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.74□□□□□ -0.37
HDAC9-210ENST00000428307 N4BP2Q86UW6 1770 aaPredicted RBP12.74□□□□□ -0.37
HDAC9-210ENST00000428307 ARXQ96QS3 562 aa12.73□□□□□ -0.37
HDAC9-210ENST00000428307 PARP4Q9UKK3 1724 aaKnown RBP12.73□□□□□ -0.37
HDAC9-210ENST00000428307 ROBO1Q9Y6N7 1651 aa12.73□□□□□ -0.37
HDAC9-210ENST00000428307 SASH1O94885 1247 aa12.73□□□□□ -0.37
HDAC9-210ENST00000428307 ESYT1Q9BSJ8 1104 aa12.73□□□□□ -0.37
HDAC9-210ENST00000428307 ERBB4Q15303 1308 aa12.72□□□□□ -0.37
HDAC9-210ENST00000428307 IFIT2P09913 472 aaKnown RBP12.72□□□□□ -0.37
HDAC9-210ENST00000428307 AACSQ86V21 672 aa12.72□□□□□ -0.37
HDAC9-210ENST00000428307 ERC1Q8IUD2 1116 aa12.72□□□□□ -0.37
HDAC9-210ENST00000428307 DNAJC10Q8IXB1 793 aa12.72□□□□□ -0.37
HDAC9-210ENST00000428307 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
HDAC9-210ENST00000428307 AOX1Q06278 1338 aa12.72□□□□□ -0.37
HDAC9-210ENST00000428307 ANO2Q9NQ90 1003 aa12.72□□□□□ -0.37
HDAC9-210ENST00000428307 FOXD4L1Q9NU39 408 aa12.72□□□□□ -0.37
HDAC9-210ENST00000428307 A0A0G2JS52 829 aa12.71□□□□□ -0.37
HDAC9-210ENST00000428307 EAF2Q96CJ1 260 aaPredicted RBP12.71□□□□□ -0.37
HDAC9-210ENST00000428307 CCDC8Q9H0W5 538 aaPredicted RBP12.71□□□□□ -0.37
HDAC9-210ENST00000428307 HSP90AA1P07900 732 aaKnown RBP12.71□□□□□ -0.38
HDAC9-210ENST00000428307 KCPQ6ZWJ8 1503 aa12.7□□□□□ -0.38
HDAC9-210ENST00000428307 IL25Q9H293 177 aa12.7□□□□□ -0.38
HDAC9-210ENST00000428307 ECHDC1Q9NTX5 307 aa12.7□□□□□ -0.38
HDAC9-210ENST00000428307 CHMP3Q9Y3E7 222 aa12.7□□□□□ -0.38
HDAC9-210ENST00000428307 GLRX3O76003 335 aaKnown RBP12.7□□□□□ -0.38
HDAC9-210ENST00000428307 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
HDAC9-210ENST00000428307 RABEP1Q15276 862 aa12.7□□□□□ -0.38
HDAC9-210ENST00000428307 LMBR1LQ6UX01 489 aa12.7□□□□□ -0.38
HDAC9-210ENST00000428307 CWC25Q9NXE8 425 aaPredicted RBP12.7□□□□□ -0.38
HDAC9-210ENST00000428307 CCDC9Q9Y3X0 531 aaKnown RBP12.7□□□□□ -0.38
HDAC9-210ENST00000428307 K7ELQ4 463 aaPredicted RBP12.69□□□□□ -0.38
HDAC9-210ENST00000428307 CNTROBQ8N137 903 aa12.69□□□□□ -0.38
HDAC9-210ENST00000428307 TLR7Q9NYK1 1049 aaKnown RBP12.69□□□□□ -0.38
HDAC9-210ENST00000428307 TNS2Q63HR2 1409 aa12.69□□□□□ -0.38
HDAC9-210ENST00000428307 TTC41PQ6P2S7 1318 aa12.69□□□□□ -0.38
HDAC9-210ENST00000428307 STARD3NLO95772 234 aa12.69□□□□□ -0.38
HDAC9-210ENST00000428307 GLI3P10071 1580 aa12.69□□□□□ -0.38
HDAC9-210ENST00000428307 CASP7P55210 303 aa12.69□□□□□ -0.38
HDAC9-210ENST00000428307 PTPN12Q05209 780 aaKnown RBP12.69□□□□□ -0.38
HDAC9-210ENST00000428307 LTBP4Q8N2S1 1624 aa12.68□□□□□ -0.38
HDAC9-210ENST00000428307 DISP2A7MBM2 1401 aa12.68□□□□□ -0.38
HDAC9-210ENST00000428307 H7C1W4 665 aa12.68□□□□□ -0.38
HDAC9-210ENST00000428307 TOM1O60784 492 aa12.68□□□□□ -0.38
HDAC9-210ENST00000428307 DEKP35659 375 aaKnown RBP12.68□□□□□ -0.38
HDAC9-210ENST00000428307 GPATCH3Q96I76 525 aa12.68□□□□□ -0.38
HDAC9-210ENST00000428307 SLC4A9Q96Q91 983 aa12.68□□□□□ -0.38
HDAC9-210ENST00000428307 TEX13AQ9BXU3 409 aaPredicted RBP12.68□□□□□ -0.38
HDAC9-210ENST00000428307 CHMP5Q9NZZ3 219 aa12.68□□□□□ -0.38
HDAC9-210ENST00000428307 RFX5P48382 616 aaPredicted RBP12.67□□□□□ -0.38
HDAC9-210ENST00000428307 RABL6Q3YEC7 729 aaPredicted RBP12.67□□□□□ -0.38
HDAC9-210ENST00000428307 CWC27Q6UX04 472 aaKnown RBP12.67□□□□□ -0.38
HDAC9-210ENST00000428307 COPRSQ9NQ92 184 aa12.67□□□□□ -0.38
HDAC9-210ENST00000428307 USP42Q9H9J4 1324 aaKnown RBP12.67□□□□□ -0.38
HDAC9-210ENST00000428307 KAT6BQ8WYB5 2073 aa12.67□□□□□ -0.38
HDAC9-210ENST00000428307 AHDC1Q5TGY3 1603 aaPredicted RBP12.67□□□□□ -0.38
HDAC9-210ENST00000428307 DDB1Q16531 1140 aa12.67□□□□□ -0.38
HDAC9-210ENST00000428307 VSIG10Q8N0Z9 540 aa12.67□□□□□ -0.38
HDAC9-210ENST00000428307 SHANK3Q9BYB0 1731 aa12.67□□□□□ -0.38
HDAC9-210ENST00000428307 FOXO4P98177 505 aa12.66□□□□□ -0.38
HDAC9-210ENST00000428307 TFCP2Q12800 502 aa12.66□□□□□ -0.38
HDAC9-210ENST00000428307 CCDC191Q8NCU4 936 aa12.66□□□□□ -0.38
HDAC9-210ENST00000428307 ACSBG1Q96GR2 724 aa12.66□□□□□ -0.38
HDAC9-210ENST00000428307 BOLA2Q9H3K6 86 aa12.66□□□□□ -0.38
HDAC9-210ENST00000428307 PALD1Q9ULE6 856 aa12.66□□□□□ -0.38
HDAC9-210ENST00000428307 SPATA31A1Q5TZJ5 1347 aa12.66□□□□□ -0.38
HDAC9-210ENST00000428307 COL14A1Q05707 1796 aaKnown RBP12.66□□□□□ -0.38
HDAC9-210ENST00000428307 TCIRG1Q13488 830 aa12.65□□□□□ -0.38
HDAC9-210ENST00000428307 BCL9O00512 1426 aa12.65□□□□□ -0.38
HDAC9-210ENST00000428307 ST18O60284 1047 aa12.65□□□□□ -0.38
HDAC9-210ENST00000428307 MCCP23508 829 aa12.65□□□□□ -0.38
HDAC9-210ENST00000428307 NEK4P51957 841 aa12.65□□□□□ -0.38
HDAC9-210ENST00000428307 KIF6Q6ZMV9 814 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms