RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 SRCIN1Q9C0H9 1055 aa11.72□□□□□ -0.53
USP54-205ENST00000424265 MBIPQ9NS73 344 aa11.72□□□□□ -0.53
USP54-205ENST00000424265 NRXN3Q9Y4C0 1643 aa11.72□□□□□ -0.53
USP54-205ENST00000424265 RSPH14Q9UHP6 348 aa11.72□□□□□ -0.53
USP54-205ENST00000424265 COG6Q9Y2V7 657 aa11.72□□□□□ -0.53
USP54-205ENST00000424265 MFAP1P55081 439 aaKnown RBP11.72□□□□□ -0.53
USP54-205ENST00000424265 NOL7Q9UMY1 257 aaKnown RBP11.72□□□□□ -0.53
USP54-205ENST00000424265 CEP83Q9Y592 693 aa11.72□□□□□ -0.53
USP54-205ENST00000424265 ZNF500O60304 480 aaPredicted RBP11.72□□□□□ -0.53
USP54-205ENST00000424265 LARP1Q6PKG0 1096 aaKnown RBP11.72□□□□□ -0.53
USP54-205ENST00000424265 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
USP54-205ENST00000424265 CHMP3Q9Y3E7 222 aa11.71□□□□□ -0.53
USP54-205ENST00000424265 RARSP54136 660 aaKnown RBP11.71□□□□□ -0.53
USP54-205ENST00000424265 DCTN1Q14203 1278 aa11.71□□□□□ -0.54
USP54-205ENST00000424265 ZKSCAN5Q9Y2L8 839 aa11.71□□□□□ -0.54
USP54-205ENST00000424265 CPDO75976 1380 aa11.71□□□□□ -0.54
USP54-205ENST00000424265 NOB1Q9ULX3 412 aaKnown RBP11.71□□□□□ -0.54
USP54-205ENST00000424265 UNC5CLQ8IV45 518 aa11.7□□□□□ -0.54
USP54-205ENST00000424265 THUMPD2Q9BTF0 503 aaKnown RBP11.7□□□□□ -0.54
USP54-205ENST00000424265 TMX1Q9H3N1 280 aa11.7□□□□□ -0.54
USP54-205ENST00000424265 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
USP54-205ENST00000424265 PLEKHG2Q9H7P9 1386 aa11.7□□□□□ -0.54
USP54-205ENST00000424265 ARID4AP29374 1257 aaPredicted RBP11.7□□□□□ -0.54
USP54-205ENST00000424265 SKAP1Q86WV1 359 aa11.7□□□□□ -0.54
USP54-205ENST00000424265 PHACTR3Q96KR7 559 aa11.7□□□□□ -0.54
USP54-205ENST00000424265 CCDC172P0C7W6 258 aa11.69□□□□□ -0.54
USP54-205ENST00000424265 U2AF2P26368 475 aaKnown RBP eCLIP11.69□□□□□ -0.54
USP54-205ENST00000424265 AIMP1Q12904 312 aaKnown RBP11.69□□□□□ -0.54
USP54-205ENST00000424265 ATP2B3Q16720 1220 aa11.69□□□□□ -0.54
USP54-205ENST00000424265 GNAI2P04899 355 aa11.69□□□□□ -0.54
USP54-205ENST00000424265 LRRFIP1Q32MZ4 808 aaKnown RBP11.69□□□□□ -0.54
USP54-205ENST00000424265 PSEN1P49768 467 aa11.69□□□□□ -0.54
USP54-205ENST00000424265 SATB1Q01826 763 aa11.69□□□□□ -0.54
USP54-205ENST00000424265 FMN2Q9NZ56 1722 aa11.69□□□□□ -0.54
USP54-205ENST00000424265 MVPQ14764 893 aaKnown RBP11.68□□□□□ -0.54
USP54-205ENST00000424265 GORABQ5T7V8 394 aa11.68□□□□□ -0.54
USP54-205ENST00000424265 ERC1Q8IUD2 1116 aa11.68□□□□□ -0.54
USP54-205ENST00000424265 PPP1R9BQ96SB3 815 aa11.68□□□□□ -0.54
USP54-205ENST00000424265 KIF20BQ96Q89 1820 aa11.68□□□□□ -0.54
USP54-205ENST00000424265 PLIN1O60240 522 aa11.68□□□□□ -0.54
USP54-205ENST00000424265 SLC52A2Q9HAB3 445 aa11.68□□□□□ -0.54
USP54-205ENST00000424265 CHD2O14647 1828 aaKnown RBP11.68□□□□□ -0.54
USP54-205ENST00000424265 CHL1O00533 1208 aa11.67□□□□□ -0.54
USP54-205ENST00000424265 PLEKHF1Q96S99 279 aa11.67□□□□□ -0.54
USP54-205ENST00000424265 MPHOSPH10O00566 681 aaKnown RBP11.67□□□□□ -0.54
USP54-205ENST00000424265 G3BP1Q13283 466 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP54-205ENST00000424265 CCDC91Q7Z6B0 441 aa11.67□□□□□ -0.54
USP54-205ENST00000424265 MRVI1Q9Y6F6 885 aa11.67□□□□□ -0.54
USP54-205ENST00000424265 FAM83GA6ND36 823 aa11.67□□□□□ -0.54
USP54-205ENST00000424265 PHKG2P15735 406 aa11.67□□□□□ -0.54
USP54-205ENST00000424265 SETQ01105 290 aaPredicted RBP11.67□□□□□ -0.54
USP54-205ENST00000424265 GPS2Q13227 327 aa11.67□□□□□ -0.54
USP54-205ENST00000424265 SSH1Q8WYL5 1049 aa11.67□□□□□ -0.54
USP54-205ENST00000424265 CRB1P82279 1406 aa11.67□□□□□ -0.54
USP54-205ENST00000424265 CD163L1Q9NR16 1453 aa11.66□□□□□ -0.54
USP54-205ENST00000424265 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
USP54-205ENST00000424265 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
USP54-205ENST00000424265 EP400NLQ6ZTU2 488 aa11.66□□□□□ -0.54
USP54-205ENST00000424265 RPAP2Q8IXW5 612 aaPredicted RBP11.66□□□□□ -0.54
USP54-205ENST00000424265 GCC1Q96CN9 775 aa11.66□□□□□ -0.54
USP54-205ENST00000424265 LRCH2Q5VUJ6 765 aa11.66□□□□□ -0.54
USP54-205ENST00000424265 MPNDQ8N594 471 aa11.65□□□□□ -0.54
USP54-205ENST00000424265 NCAPGQ9BPX3 1015 aa11.65□□□□□ -0.54
USP54-205ENST00000424265 RNF123Q5XPI4 1314 aa11.65□□□□□ -0.54
USP54-205ENST00000424265 C8orf34Q49A92 452 aa11.65□□□□□ -0.54
USP54-205ENST00000424265 BRMS1Q9HCU9 246 aa11.65□□□□□ -0.54
USP54-205ENST00000424265 PANK1Q8TE04 598 aa11.65□□□□□ -0.54
USP54-205ENST00000424265 DNAAF4Q8WXU2 420 aa11.65□□□□□ -0.54
USP54-205ENST00000424265 TRIM35Q9UPQ4 493 aa11.65□□□□□ -0.54
USP54-205ENST00000424265 BCAR3O75815 825 aa11.65□□□□□ -0.54
USP54-205ENST00000424265 KRT222Q8N1A0 295 aa11.65□□□□□ -0.54
USP54-205ENST00000424265 MIS18AQ9NYP9 233 aa11.65□□□□□ -0.54
USP54-205ENST00000424265 FLIIQ13045 1269 aa11.64□□□□□ -0.55
USP54-205ENST00000424265 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.64□□□□□ -0.55
USP54-205ENST00000424265 IQSEC2Q5JU85 1478 aa11.64□□□□□ -0.55
USP54-205ENST00000424265 ZPR1O75312 459 aa11.64□□□□□ -0.55
USP54-205ENST00000424265 MYL6BP14649 208 aa11.64□□□□□ -0.55
USP54-205ENST00000424265 NBPF20Q3BBV1 942 aa11.64□□□□□ -0.55
USP54-205ENST00000424265 ZNF790Q6PG37 636 aa11.64□□□□□ -0.55
USP54-205ENST00000424265 NFATC2IPQ8NCF5 419 aa11.64□□□□□ -0.55
USP54-205ENST00000424265 DRC1Q96MC2 740 aa11.63□□□□□ -0.55
USP54-205ENST00000424265 PLCB2Q00722 1185 aa11.63□□□□□ -0.55
USP54-205ENST00000424265 EGFL6Q8IUX8 553 aa11.63□□□□□ -0.55
USP54-205ENST00000424265 AK7Q96M32 723 aa11.63□□□□□ -0.55
USP54-205ENST00000424265 ALDH1L1O75891 902 aa11.63□□□□□ -0.55
USP54-205ENST00000424265 ZNF853P0CG23 659 aa11.63□□□□□ -0.55
USP54-205ENST00000424265 FAM98CQ17RN3 349 aaKnown RBP11.63□□□□□ -0.55
USP54-205ENST00000424265 PAIP2Q9BPZ3 127 aaKnown RBP11.63□□□□□ -0.55
USP54-205ENST00000424265 FAM177BA6PVY3 158 aa11.63□□□□□ -0.55
USP54-205ENST00000424265 GTF2F1P35269 517 aaKnown RBP eCLIP11.63□□□□□ -0.55
USP54-205ENST00000424265 ICE2Q659A1 982 aa11.63□□□□□ -0.55
USP54-205ENST00000424265 TSC1Q92574 1164 aa11.63□□□□□ -0.55
USP54-205ENST00000424265 OVOS2A0A0G2JMS6 1433 aa11.62□□□□□ -0.55
USP54-205ENST00000424265 SSH2Q76I76 1423 aa11.62□□□□□ -0.55
USP54-205ENST00000424265 H0YHG0 523 aa11.62□□□□□ -0.55
USP54-205ENST00000424265 SARNPP82979 210 aaKnown RBP11.62□□□□□ -0.55
USP54-205ENST00000424265 QTRT2Q9H974 415 aaKnown RBP11.62□□□□□ -0.55
USP54-205ENST00000424265 KDRP35968 1356 aa11.62□□□□□ -0.55
USP54-205ENST00000424265 C10orf67Q8IYJ2 551 aa11.62□□□□□ -0.55
USP54-205ENST00000424265 ERC2O15083 957 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms