RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 TAF6LQ9Y6J9 622 aa14.52□□□□□ -0.09
PTPRN-204ENST00000423636 DDIT3P35638 169 aa14.51□□□□□ -0.09
PTPRN-204ENST00000423636 PRPF40BQ6NWY9 871 aaKnown RBP14.51□□□□□ -0.09
PTPRN-204ENST00000423636 LARP1Q6PKG0 1096 aaKnown RBP14.51□□□□□ -0.09
PTPRN-204ENST00000423636 KIF1BPQ96EK5 621 aa14.51□□□□□ -0.09
PTPRN-204ENST00000423636 DNAJC2Q99543 621 aaKnown RBP14.51□□□□□ -0.09
PTPRN-204ENST00000423636 SASH1O94885 1247 aa14.51□□□□□ -0.09
PTPRN-204ENST00000423636 SALL3Q9BXA9 1300 aa14.51□□□□□ -0.09
PTPRN-204ENST00000423636 UTRNP46939 3433 aa14.51□□□□□ -0.09
PTPRN-204ENST00000423636 KIF24Q5T7B8 1368 aa14.5□□□□□ -0.09
PTPRN-204ENST00000423636 G3BP1Q13283 466 aaKnown RBP eCLIP14.5□□□□□ -0.09
PTPRN-204ENST00000423636 ADCK5Q3MIX3 580 aa14.5□□□□□ -0.09
PTPRN-204ENST00000423636 SYNE4Q8N205 404 aa14.5□□□□□ -0.09
PTPRN-204ENST00000423636 DIAPH3Q9NSV4 1193 aa14.5□□□□□ -0.09
PTPRN-204ENST00000423636 ZDHHC9Q9Y397 364 aa14.5□□□□□ -0.09
PTPRN-204ENST00000423636 A0A087WZG4 1122 aa14.5□□□□□ -0.09
PTPRN-204ENST00000423636 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.5□□□□□ -0.09
PTPRN-204ENST00000423636 ANKRD13DQ6ZTN6 518 aa14.5□□□□□ -0.09
PTPRN-204ENST00000423636 BRINP3Q76B58 766 aa14.5□□□□□ -0.09
PTPRN-204ENST00000423636 IFNL2Q8IZJ0 200 aa14.5□□□□□ -0.09
PTPRN-204ENST00000423636 NEUROD6Q96NK8 337 aa14.5□□□□□ -0.09
PTPRN-204ENST00000423636 GBP4Q96PP9 640 aa14.5□□□□□ -0.09
PTPRN-204ENST00000423636 MEGF6O75095 1541 aa14.5□□□□□ -0.09
PTPRN-204ENST00000423636 FOSBP53539 338 aa14.49□□□□□ -0.09
PTPRN-204ENST00000423636 CCDC129Q6ZRS4 1044 aa14.49□□□□□ -0.09
PTPRN-204ENST00000423636 DDX21Q9NR30 783 aaKnown RBP eCLIP14.49□□□□□ -0.09
PTPRN-204ENST00000423636 SRCAPQ6ZRS2 3230 aa14.49□□□□□ -0.09
PTPRN-204ENST00000423636 NECAB1Q8N987 351 aa14.49□□□□□ -0.09
PTPRN-204ENST00000423636 SEC62Q99442 399 aaKnown RBP14.49□□□□□ -0.09
PTPRN-204ENST00000423636 PRKCSHP14314 528 aaPredicted RBP14.48□□□□□ -0.09
PTPRN-204ENST00000423636 POLA2Q14181 598 aa14.48□□□□□ -0.09
PTPRN-204ENST00000423636 CASTP20810 708 aaKnown RBP14.48□□□□□ -0.09
PTPRN-204ENST00000423636 NEXNQ0ZGT2 675 aa14.48□□□□□ -0.09
PTPRN-204ENST00000423636 STK3Q13188 491 aa14.48□□□□□ -0.09
PTPRN-204ENST00000423636 LARGE1O95461 756 aa14.48□□□□□ -0.09
PTPRN-204ENST00000423636 HSP90AB3PQ58FF7 597 aa14.48□□□□□ -0.09
PTPRN-204ENST00000423636 KIAA1211Q6ZU35 1233 aa14.48□□□□□ -0.09
PTPRN-204ENST00000423636 NEURL1BA8MQ27 555 aa14.47□□□□□ -0.09
PTPRN-204ENST00000423636 OSBPL3Q9H4L5 887 aa14.47□□□□□ -0.09
PTPRN-204ENST00000423636 ANO8Q9HCE9 1232 aaPredicted RBP14.47□□□□□ -0.09
PTPRN-204ENST00000423636 KDM6AO15550 1401 aaPredicted RBP14.47□□□□□ -0.09
PTPRN-204ENST00000423636 TIMM10P62072 90 aa14.47□□□□□ -0.09
PTPRN-204ENST00000423636 TFCP2Q12800 502 aa14.47□□□□□ -0.09
PTPRN-204ENST00000423636 DDX46Q7L014 1031 aaKnown RBP14.47□□□□□ -0.09
PTPRN-204ENST00000423636 RNF214Q8ND24 703 aa14.47□□□□□ -0.09
PTPRN-204ENST00000423636 LRRC2Q9BYS8 371 aa14.47□□□□□ -0.09
PTPRN-204ENST00000423636 HYPKQ9NX55 129 aa14.47□□□□□ -0.09
PTPRN-204ENST00000423636 GPTP24298 496 aa14.46□□□□□ -0.09
PTPRN-204ENST00000423636 CADPS2Q86UW7 1296 aa14.46□□□□□ -0.09
PTPRN-204ENST00000423636 FSD1Q9BTV5 496 aa14.46□□□□□ -0.09
PTPRN-204ENST00000423636 DDX58O95786 925 aaKnown RBP14.46□□□□□ -0.09
PTPRN-204ENST00000423636 LMBR1LQ6UX01 489 aa14.46□□□□□ -0.09
PTPRN-204ENST00000423636 CNTROBQ8N137 903 aa14.46□□□□□ -0.09
PTPRN-204ENST00000423636 LINS1Q8NG48 757 aa14.46□□□□□ -0.09
PTPRN-204ENST00000423636 DDX11L8A8MPP1 907 aa14.46□□□□□ -0.1
PTPRN-204ENST00000423636 NBPF26B4DH59 902 aa14.46□□□□□ -0.1
PTPRN-204ENST00000423636 GCKRQ14397 625 aa14.46□□□□□ -0.1
PTPRN-204ENST00000423636 NBPF14Q5TI25 921 aa14.46□□□□□ -0.1
PTPRN-204ENST00000423636 NBPF10Q6P3W6 841 aaKnown RBP14.46□□□□□ -0.1
PTPRN-204ENST00000423636 NBPF15Q8N660 670 aa14.46□□□□□ -0.1
PTPRN-204ENST00000423636 JAKMIP1Q96N16 626 aaKnown RBP14.46□□□□□ -0.1
PTPRN-204ENST00000423636 SNRKQ9NRH2 765 aa14.46□□□□□ -0.1
PTPRN-204ENST00000423636 MCCP23508 829 aa14.45□□□□□ -0.1
PTPRN-204ENST00000423636 SLAIN2Q9P270 581 aa14.45□□□□□ -0.1
PTPRN-204ENST00000423636 NMIQ13287 307 aaPredicted RBP14.45□□□□□ -0.1
PTPRN-204ENST00000423636 CCDC83Q8IWF9 413 aa14.45□□□□□ -0.1
PTPRN-204ENST00000423636 SNX14Q9Y5W7 946 aa14.45□□□□□ -0.1
PTPRN-204ENST00000423636 EP400Q96L91 3159 aa14.45□□□□□ -0.1
PTPRN-204ENST00000423636 A0A0D9SFI3 127 aa14.44□□□□□ -0.1
PTPRN-204ENST00000423636 EIF5BO60841 1220 aaKnown RBP14.44□□□□□ -0.1
PTPRN-204ENST00000423636 RRAGDQ9NQL2 400 aaPredicted RBP14.44□□□□□ -0.1
PTPRN-204ENST00000423636 ADAMTS2O95450 1211 aa14.44□□□□□ -0.1
PTPRN-204ENST00000423636 SNRPA1P09661 255 aaKnown RBP14.44□□□□□ -0.1
PTPRN-204ENST00000423636 AK2P54819 239 aa14.44□□□□□ -0.1
PTPRN-204ENST00000423636 FAM173BQ6P4H8 233 aa14.44□□□□□ -0.1
PTPRN-204ENST00000423636 DBNDD2Q9BQY9 259 aa14.44□□□□□ -0.1
PTPRN-204ENST00000423636 ECHDC1Q9NTX5 307 aa14.44□□□□□ -0.1
PTPRN-204ENST00000423636 ASAP1Q9ULH1 1129 aa14.44□□□□□ -0.1
PTPRN-204ENST00000423636 SMIM5Q71RC9 77 aa14.44□□□□□ -0.1
PTPRN-204ENST00000423636 ZNF589Q86UQ0 364 aaPredicted RBP14.44□□□□□ -0.1
PTPRN-204ENST00000423636 FERMT3Q86UX7 667 aa14.44□□□□□ -0.1
PTPRN-204ENST00000423636 ZCRB1Q8TBF4 217 aaKnown RBP14.44□□□□□ -0.1
PTPRN-204ENST00000423636 NAP1L2Q9ULW6 460 aaPredicted RBP14.44□□□□□ -0.1
PTPRN-204ENST00000423636 SGSM2O43147 1006 aa14.43□□□□□ -0.1
PTPRN-204ENST00000423636 KDM4AO75164 1064 aa14.43□□□□□ -0.1
PTPRN-204ENST00000423636 FMNL2Q96PY5 1086 aa14.43□□□□□ -0.1
PTPRN-204ENST00000423636 GRPEL1Q9HAV7 217 aa14.43□□□□□ -0.1
PTPRN-204ENST00000423636 STAP2Q9UGK3 403 aa14.43□□□□□ -0.1
PTPRN-204ENST00000423636 A0A0G2JLW4 131 aa14.43□□□□□ -0.1
PTPRN-204ENST00000423636 KCNQ4P56696 695 aa14.43□□□□□ -0.1
PTPRN-204ENST00000423636 FAM208AQ9UK61 1670 aaKnown RBP14.43□□□□□ -0.1
PTPRN-204ENST00000423636 RAB11FIP3O75154 756 aa14.43□□□□□ -0.1
PTPRN-204ENST00000423636 GADD45BO75293 160 aaPredicted RBP14.43□□□□□ -0.1
PTPRN-204ENST00000423636 PUS3Q9BZE2 481 aaKnown RBP14.43□□□□□ -0.1
PTPRN-204ENST00000423636 FAM89AQ96GI7 184 aa14.42□□□□□ -0.1
PTPRN-204ENST00000423636 MST1RQ04912 1400 aa14.42□□□□□ -0.1
PTPRN-204ENST00000423636 SPATA31A3Q5VYP0 1347 aa14.42□□□□□ -0.1
PTPRN-204ENST00000423636 MED1Q15648 1581 aaPredicted RBP14.42□□□□□ -0.1
PTPRN-204ENST00000423636 GOLGA6L22H0YM25 854 aa14.42□□□□□ -0.1
PTPRN-204ENST00000423636 LRRC24Q50LG9 513 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms