RNA–Protein interactions for RNA: ENST00000423275.5

RAF1-203, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 2,354 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-203ENST00000423275 SUCLG2Q96I99 432 aa22.68■■□□□ 1.22
RAF1-203ENST00000423275 SLC52A2Q9HAB3 445 aa22.68■■□□□ 1.22
RAF1-203ENST00000423275 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.68■■□□□ 1.22
RAF1-203ENST00000423275 IL17RAQ96F46 866 aa22.67■■□□□ 1.22
RAF1-203ENST00000423275 RBM27Q9P2N5 1060 aaKnown RBP22.67■■□□□ 1.22
RAF1-203ENST00000423275 MEGF6O75095 1541 aa22.67■■□□□ 1.22
RAF1-203ENST00000423275 SGSM2O43147 1006 aa22.67■■□□□ 1.22
RAF1-203ENST00000423275 PHKG2P15735 406 aa22.67■■□□□ 1.22
RAF1-203ENST00000423275 HSPA4P34932 840 aa22.67■■□□□ 1.22
RAF1-203ENST00000423275 CHRNA2Q15822 529 aa22.67■■□□□ 1.22
RAF1-203ENST00000423275 LINS1Q8NG48 757 aa22.67■■□□□ 1.22
RAF1-203ENST00000423275 GRM8O00222 908 aa22.65■■□□□ 1.22
RAF1-203ENST00000423275 MYL6BP14649 208 aa22.65■■□□□ 1.22
RAF1-203ENST00000423275 CNTROBQ8N137 903 aa22.65■■□□□ 1.22
RAF1-203ENST00000423275 TRIM44Q96DX7 344 aaPredicted RBP22.65■■□□□ 1.22
RAF1-203ENST00000423275 USP42Q9H9J4 1324 aaKnown RBP22.65■■□□□ 1.22
RAF1-203ENST00000423275 ESPNB1AK53 854 aa22.65■■□□□ 1.22
RAF1-203ENST00000423275 BRD1O95696 1058 aa22.65■■□□□ 1.22
RAF1-203ENST00000423275 IGKV5-2P06315 115 aa22.65■■□□□ 1.22
RAF1-203ENST00000423275 TATP17735 454 aaPredicted RBP22.64■■□□□ 1.22
RAF1-203ENST00000423275 BICC1Q9H694 974 aaKnown RBP22.64■■□□□ 1.22
RAF1-203ENST00000423275 NSFL1CQ9UNZ2 370 aaKnown RBP22.64■■□□□ 1.22
RAF1-203ENST00000423275 STRCP1A6NGW2 1772 aa22.64■■□□□ 1.21
RAF1-203ENST00000423275 CWC27Q6UX04 472 aaKnown RBP22.64■■□□□ 1.21
RAF1-203ENST00000423275 CLASRPQ8N2M8 674 aaKnown RBP22.64■■□□□ 1.21
RAF1-203ENST00000423275 INTS4Q96HW7 963 aaKnown RBP22.64■■□□□ 1.21
RAF1-203ENST00000423275 C5P01031 1676 aa22.63■■□□□ 1.21
RAF1-203ENST00000423275 ZNF496Q96IT1 587 aaPredicted RBP22.63■■□□□ 1.21
RAF1-203ENST00000423275 LSG1Q9H089 658 aaKnown RBP22.63■■□□□ 1.21
RAF1-203ENST00000423275 RAD50Q92878 1312 aa22.63■■□□□ 1.21
RAF1-203ENST00000423275 SCN11AQ9UI33 1791 aa22.63■■□□□ 1.21
RAF1-203ENST00000423275 DDX58O95786 925 aaKnown RBP22.63■■□□□ 1.21
RAF1-203ENST00000423275 CSB-PGBD3P0DP91 1061 aa22.63■■□□□ 1.21
RAF1-203ENST00000423275 UTYO14607 1347 aa22.63■■□□□ 1.21
RAF1-203ENST00000423275 TTC41PQ6P2S7 1318 aa22.63■■□□□ 1.21
RAF1-203ENST00000423275 COL18A1P39060 1754 aa22.62■■□□□ 1.21
RAF1-203ENST00000423275 GLRX3O76003 335 aaKnown RBP22.62■■□□□ 1.21
RAF1-203ENST00000423275 PIP4K2AP48426 406 aaPredicted RBP22.62■■□□□ 1.21
RAF1-203ENST00000423275 SPG7Q9UQ90 795 aa22.62■■□□□ 1.21
RAF1-203ENST00000423275 RIC3Q7Z5B4 369 aa22.62■■□□□ 1.21
RAF1-203ENST00000423275 EPB41L2O43491 1005 aaKnown RBP22.61■■□□□ 1.21
RAF1-203ENST00000423275 SASH1O94885 1247 aa22.61■■□□□ 1.21
RAF1-203ENST00000423275 RASEFQ8IZ41 740 aa22.61■■□□□ 1.21
RAF1-203ENST00000423275 XAGE3Q8WTP9 111 aa22.61■■□□□ 1.21
RAF1-203ENST00000423275 TMEM63CQ9P1W3 806 aa22.61■■□□□ 1.21
RAF1-203ENST00000423275 CRYBG1Q9Y4K1 1723 aa22.61■■□□□ 1.21
RAF1-203ENST00000423275 CYP27B1O15528 508 aa22.61■■□□□ 1.21
RAF1-203ENST00000423275 CCDC173Q0VFZ6 552 aa22.61■■□□□ 1.21
RAF1-203ENST00000423275 ECHDC1Q9NTX5 307 aa22.61■■□□□ 1.21
RAF1-203ENST00000423275 USP16Q9Y5T5 823 aa22.61■■□□□ 1.21
RAF1-203ENST00000423275 SNX14Q9Y5W7 946 aa22.61■■□□□ 1.21
RAF1-203ENST00000423275 PRIM1P49642 420 aaKnown RBP22.6■■□□□ 1.21
RAF1-203ENST00000423275 COPS6Q7L5N1 327 aa22.6■■□□□ 1.21
RAF1-203ENST00000423275 AACSQ86V21 672 aa22.6■■□□□ 1.21
RAF1-203ENST00000423275 IFNL2Q8IZJ0 200 aa22.6■■□□□ 1.21
RAF1-203ENST00000423275 KLHDC4Q8TBB5 520 aa22.6■■□□□ 1.21
RAF1-203ENST00000423275 PPP1R9BQ96SB3 815 aa22.6■■□□□ 1.21
RAF1-203ENST00000423275 RBSNQ9H1K0 784 aa22.6■■□□□ 1.21
RAF1-203ENST00000423275 IFIT2P09913 472 aaKnown RBP22.59■■□□□ 1.21
RAF1-203ENST00000423275 NEURL1BA8MQ27 555 aa22.58■■□□□ 1.21
RAF1-203ENST00000423275 FOXD4L6Q3SYB3 417 aaPredicted RBP22.58■■□□□ 1.21
RAF1-203ENST00000423275 FOXD4L3Q6VB84 417 aaPredicted RBP22.58■■□□□ 1.21
RAF1-203ENST00000423275 ERC1Q8IUD2 1116 aa22.58■■□□□ 1.21
RAF1-203ENST00000423275 EAF2Q96CJ1 260 aaPredicted RBP22.58■■□□□ 1.21
RAF1-203ENST00000423275 SIL1Q9H173 461 aa22.58■■□□□ 1.21
RAF1-203ENST00000423275 EPHA10Q5JZY3 1008 aa22.57■■□□□ 1.2
RAF1-203ENST00000423275 LARP1Q6PKG0 1096 aaKnown RBP22.57■■□□□ 1.2
RAF1-203ENST00000423275 LRP10Q7Z4F1 713 aa22.57■■□□□ 1.2
RAF1-203ENST00000423275 JARID2Q92833 1246 aaPredicted RBP22.57■■□□□ 1.2
RAF1-203ENST00000423275 MYD88Q99836 296 aa22.57■■□□□ 1.2
RAF1-203ENST00000423275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.57■■□□□ 1.21e-6■□□□□ 11
RAF1-203ENST00000423275 ANP32BQ92688 251 aaKnown RBP22.57■■□□□ 1.2
RAF1-203ENST00000423275 TLR7Q9NYK1 1049 aaKnown RBP22.57■■□□□ 1.2
RAF1-203ENST00000423275 HDAC5Q9UQL6 1122 aa22.57■■□□□ 1.2
RAF1-203ENST00000423275 PTH1RQ03431 593 aa22.56■■□□□ 1.2
RAF1-203ENST00000423275 LARP6Q9BRS8 491 aaKnown RBP22.56■■□□□ 1.2
RAF1-203ENST00000423275 CCDC8Q9H0W5 538 aaPredicted RBP22.56■■□□□ 1.2
RAF1-203ENST00000423275 SYCE3A1L190 88 aa22.56■■□□□ 1.2
RAF1-203ENST00000423275 GCKRQ14397 625 aa22.56■■□□□ 1.2
RAF1-203ENST00000423275 DIAPH3Q9NSV4 1193 aa22.56■■□□□ 1.2
RAF1-203ENST00000423275 KIAA1211Q6ZU35 1233 aa22.55■■□□□ 1.2
RAF1-203ENST00000423275 TTC14Q96N46 770 aa22.55■■□□□ 1.2
RAF1-203ENST00000423275 TNS3Q68CZ2 1445 aa22.55■■□□□ 1.2
RAF1-203ENST00000423275 CPA1P15085 419 aa22.55■■□□□ 1.2
RAF1-203ENST00000423275 G3BP1Q13283 466 aaKnown RBP eCLIP22.55■■□□□ 1.2
RAF1-203ENST00000423275 DCAF5Q96JK2 942 aa22.55■■□□□ 1.2
RAF1-203ENST00000423275 DCCP43146 1447 aa22.54■■□□□ 1.2
RAF1-203ENST00000423275 AK2P54819 239 aa22.54■■□□□ 1.2
RAF1-203ENST00000423275 METTL22Q9BUU2 404 aaPredicted RBP22.54■■□□□ 1.2
RAF1-203ENST00000423275 SNRPA1P09661 255 aaKnown RBP22.54■■□□□ 1.2
RAF1-203ENST00000423275 NEXNQ0ZGT2 675 aa22.54■■□□□ 1.2
RAF1-203ENST00000423275 CADPS2Q86UW7 1296 aa22.54■■□□□ 1.2
RAF1-203ENST00000423275 GDPD2Q9HCC8 539 aa22.54■■□□□ 1.2
RAF1-203ENST00000423275 SPATA31A3Q5VYP0 1347 aa22.53■■□□□ 1.2
RAF1-203ENST00000423275 ANKRD13DQ6ZTN6 518 aa22.53■■□□□ 1.2
RAF1-203ENST00000423275 GPATCH3Q96I76 525 aa22.53■■□□□ 1.2
RAF1-203ENST00000423275 MBD3O95983 291 aa22.53■■□□□ 1.2
RAF1-203ENST00000423275 LRSAM1Q6UWE0 723 aa22.53■■□□□ 1.2
RAF1-203ENST00000423275 TTC5Q8N0Z6 440 aa22.53■■□□□ 1.2
RAF1-203ENST00000423275 HSPA2P54652 639 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms