RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 CBX8Q9HC52 389 aa19.86■□□□□ 0.77
NPC1L1-203ENST00000423141 TTC21BQ7Z4L5 1316 aa19.86■□□□□ 0.77
NPC1L1-203ENST00000423141 ANO6Q4KMQ2 910 aa19.86■□□□□ 0.77
NPC1L1-203ENST00000423141 CDC37L1Q7L3B6 337 aa19.86■□□□□ 0.77
NPC1L1-203ENST00000423141 CTNNA3Q9UI47 895 aa19.86■□□□□ 0.77
NPC1L1-203ENST00000423141 FEZ1Q99689 392 aa19.85■□□□□ 0.77
NPC1L1-203ENST00000423141 RGPD1P0DJD0 1748 aa19.85■□□□□ 0.77
NPC1L1-203ENST00000423141 TNNT1P13805 278 aa19.84■□□□□ 0.77
NPC1L1-203ENST00000423141 ZSCAN25Q6NSZ9 544 aa19.84■□□□□ 0.77
NPC1L1-203ENST00000423141 DACT1Q9NYF0 836 aa19.84■□□□□ 0.77
NPC1L1-203ENST00000423141 OGFRQ9NZT2 677 aa19.84■□□□□ 0.77
NPC1L1-203ENST00000423141 AKAP12Q02952 1782 aa19.84■□□□□ 0.77
NPC1L1-203ENST00000423141 SRGAP3O43295 1099 aa19.84■□□□□ 0.77
NPC1L1-203ENST00000423141 VPS53Q5VIR6 699 aa19.84■□□□□ 0.77
NPC1L1-203ENST00000423141 PHAXQ9H814 394 aaKnown RBP19.84■□□□□ 0.77
NPC1L1-203ENST00000423141 A2ML1A8K2U0 1454 aa19.83■□□□□ 0.77
NPC1L1-203ENST00000423141 SMTNL1A8MU46 457 aa19.83■□□□□ 0.77
NPC1L1-203ENST00000423141 TRIM5Q9C035 493 aa19.83■□□□□ 0.77
NPC1L1-203ENST00000423141 RAB11FIP3O75154 756 aa19.83■□□□□ 0.76
NPC1L1-203ENST00000423141 POLA2Q14181 598 aa19.83■□□□□ 0.76
NPC1L1-203ENST00000423141 LARP1BQ659C4 914 aaKnown RBP19.83■□□□□ 0.76
NPC1L1-203ENST00000423141 TPCN1Q9ULQ1 816 aa19.83■□□□□ 0.76
NPC1L1-203ENST00000423141 FAM208AQ9UK61 1670 aaKnown RBP19.83■□□□□ 0.76
NPC1L1-203ENST00000423141 ITSN1Q15811 1721 aa19.83■□□□□ 0.76
NPC1L1-203ENST00000423141 OVOS2A0A0J9YW53 1432 aa19.82■□□□□ 0.76
NPC1L1-203ENST00000423141 OVOS2Q6IE36 1432 aa19.82■□□□□ 0.76
NPC1L1-203ENST00000423141 ZNF75DP51815 510 aa19.82■□□□□ 0.76
NPC1L1-203ENST00000423141 KRT85P78386 507 aa19.82■□□□□ 0.76
NPC1L1-203ENST00000423141 ZNF771Q7L3S4 317 aaPredicted RBP19.82■□□□□ 0.76
NPC1L1-203ENST00000423141 TNMDQ9H2S6 317 aa19.82■□□□□ 0.76
NPC1L1-203ENST00000423141 ZSWIM6Q9HCJ5 1215 aa19.82■□□□□ 0.76
NPC1L1-203ENST00000423141 TFIP11Q9UBB9 837 aaKnown RBP19.82■□□□□ 0.76
NPC1L1-203ENST00000423141 CYP46A1Q9Y6A2 500 aa19.82■□□□□ 0.76
NPC1L1-203ENST00000423141 NBPF7P0C2Y1 421 aaPredicted RBP19.81■□□□□ 0.76
NPC1L1-203ENST00000423141 PLA2G4DQ86XP0 818 aa19.81■□□□□ 0.76
NPC1L1-203ENST00000423141 KLHL34Q8N239 644 aa19.81■□□□□ 0.76
NPC1L1-203ENST00000423141 CACTINQ8WUQ7 758 aaKnown RBP19.81■□□□□ 0.76
NPC1L1-203ENST00000423141 KIF1BPQ96EK5 621 aa19.81■□□□□ 0.76
NPC1L1-203ENST00000423141 CCDC144BQ3MJ40 725 aa19.81■□□□□ 0.76
NPC1L1-203ENST00000423141 CCDC144CPQ8IYA2 1237 aa19.81■□□□□ 0.76
NPC1L1-203ENST00000423141 SH2B1Q9NRF2 756 aaPredicted RBP19.81■□□□□ 0.76
NPC1L1-203ENST00000423141 NEO1Q92859 1461 aa19.8■□□□□ 0.76
NPC1L1-203ENST00000423141 ACEP12821 1306 aa19.8■□□□□ 0.76
NPC1L1-203ENST00000423141 ZSCAN31Q96LW9 406 aaPredicted RBP19.8■□□□□ 0.76
NPC1L1-203ENST00000423141 TCEANC2Q96MN5 208 aa19.8■□□□□ 0.76
NPC1L1-203ENST00000423141 CCDC112Q8NEF3 446 aa19.79■□□□□ 0.76
NPC1L1-203ENST00000423141 ZNF592Q92610 1267 aa19.79■□□□□ 0.76
NPC1L1-203ENST00000423141 TPD52L1Q16890 204 aaPredicted RBP19.79■□□□□ 0.76
NPC1L1-203ENST00000423141 DNAJC25Q9H1X3 360 aa19.79■□□□□ 0.76
NPC1L1-203ENST00000423141 DDX41Q9UJV9 622 aaKnown RBP19.79■□□□□ 0.76
NPC1L1-203ENST00000423141 EYA1Q99502 592 aa19.78■□□□□ 0.76
NPC1L1-203ENST00000423141 TTC21AQ8NDW8 1320 aa19.78■□□□□ 0.76
NPC1L1-203ENST00000423141 RICTORQ6R327 1708 aa19.78■□□□□ 0.76
NPC1L1-203ENST00000423141 CEP170BQ9Y4F5 1589 aaPredicted RBP19.78■□□□□ 0.76
NPC1L1-203ENST00000423141 ARID5BQ14865 1188 aa19.78■□□□□ 0.76
NPC1L1-203ENST00000423141 SYCP1Q15431 976 aa19.78■□□□□ 0.76
NPC1L1-203ENST00000423141 CLIP2Q9UDT6 1046 aa19.78■□□□□ 0.76
NPC1L1-203ENST00000423141 NRXN3Q9Y4C0 1643 aa19.77■□□□□ 0.76
NPC1L1-203ENST00000423141 ELP1O95163 1332 aa19.77■□□□□ 0.76
NPC1L1-203ENST00000423141 USP27XA6NNY8 438 aa19.77■□□□□ 0.76
NPC1L1-203ENST00000423141 NR1I2O75469 434 aa19.77■□□□□ 0.76
NPC1L1-203ENST00000423141 CGNQ9P2M7 1197 aaKnown RBP19.77■□□□□ 0.76
NPC1L1-203ENST00000423141 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.77■□□□□ 0.75
NPC1L1-203ENST00000423141 V9GYY5 206 aaPredicted RBP19.77■□□□□ 0.75
NPC1L1-203ENST00000423141 GOLGA6L4A6NEF3 574 aa19.76■□□□□ 0.75
NPC1L1-203ENST00000423141 ZNF165P49910 485 aa19.76■□□□□ 0.75
NPC1L1-203ENST00000423141 NECTIN1Q15223 517 aa19.76■□□□□ 0.75
NPC1L1-203ENST00000423141 TDRD7Q8NHU6 1098 aaKnown RBP19.76■□□□□ 0.75
NPC1L1-203ENST00000423141 SPATA32Q96LK8 384 aa19.76■□□□□ 0.75
NPC1L1-203ENST00000423141 TM6SF1Q9BZW5 370 aa19.76■□□□□ 0.75
NPC1L1-203ENST00000423141 MAP3K5Q99683 1374 aa19.76■□□□□ 0.75
NPC1L1-203ENST00000423141 SPATA31D1Q6ZQQ2 1576 aa19.76■□□□□ 0.75
NPC1L1-203ENST00000423141 SLFN14P0C7P3 912 aa19.76■□□□□ 0.75
NPC1L1-203ENST00000423141 KIF18AQ8NI77 898 aa19.76■□□□□ 0.75
NPC1L1-203ENST00000423141 GLRX3O76003 335 aaKnown RBP19.75■□□□□ 0.75
NPC1L1-203ENST00000423141 HDGFL1Q5TGJ6 251 aa19.75■□□□□ 0.75
NPC1L1-203ENST00000423141 LARP1Q6PKG0 1096 aaKnown RBP19.75■□□□□ 0.75
NPC1L1-203ENST00000423141 CLSTN2Q9H4D0 955 aa19.75■□□□□ 0.75
NPC1L1-203ENST00000423141 PAXBP1Q9Y5B6 917 aa19.75■□□□□ 0.75
NPC1L1-203ENST00000423141 RBM8AQ9Y5S9 174 aaKnown RBP19.75■□□□□ 0.75
NPC1L1-203ENST00000423141 TAF6LQ9Y6J9 622 aa19.75■□□□□ 0.75
NPC1L1-203ENST00000423141 OS9Q13438 667 aaPredicted RBP19.75■□□□□ 0.75
NPC1L1-203ENST00000423141 IL17REQ8NFR9 667 aa19.75■□□□□ 0.75
NPC1L1-203ENST00000423141 LEO1Q8WVC0 666 aaPredicted RBP19.75■□□□□ 0.75
NPC1L1-203ENST00000423141 KCNB2Q92953 911 aa19.75■□□□□ 0.75
NPC1L1-203ENST00000423141 KDRP35968 1356 aa19.74■□□□□ 0.75
NPC1L1-203ENST00000423141 CEP135Q66GS9 1140 aa19.74■□□□□ 0.75
NPC1L1-203ENST00000423141 CREB3L3Q68CJ9 461 aa19.74■□□□□ 0.75
NPC1L1-203ENST00000423141 RBM43Q6ZSC3 357 aaKnown RBP19.74■□□□□ 0.75
NPC1L1-203ENST00000423141 CRYBG1Q9Y4K1 1723 aa19.74■□□□□ 0.75
NPC1L1-203ENST00000423141 CCDC171Q6TFL3 1326 aa19.74■□□□□ 0.75
NPC1L1-203ENST00000423141 PXDNLA1KZ92 1463 aa19.74■□□□□ 0.75
NPC1L1-203ENST00000423141 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.74■□□□□ 0.75
NPC1L1-203ENST00000423141 RUFY2Q8WXA3 655 aa19.74■□□□□ 0.75
NPC1L1-203ENST00000423141 PGBD1Q96JS3 809 aa19.74■□□□□ 0.75
NPC1L1-203ENST00000423141 FAM227BQ96M60 508 aa19.74■□□□□ 0.75
NPC1L1-203ENST00000423141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.73■□□□□ 0.75
NPC1L1-203ENST00000423141 GNAT3A8MTJ3 354 aa19.73■□□□□ 0.75
NPC1L1-203ENST00000423141 KMT5BQ4FZB7 885 aa19.73■□□□□ 0.75
NPC1L1-203ENST00000423141 MORC2Q9Y6X9 1032 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms