RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 TTC5Q8N0Z6 440 aa13.84□□□□□ -0.19
TNFAIP3-202ENST00000420009 TAOK3Q9H2K8 898 aa13.84□□□□□ -0.19
TNFAIP3-202ENST00000420009 BCORQ6W2J9 1755 aa13.83□□□□□ -0.19
TNFAIP3-202ENST00000420009 DIAPH1O60610 1272 aaKnown RBP13.83□□□□□ -0.2
TNFAIP3-202ENST00000420009 IL6STP40189 918 aaPredicted RBP13.83□□□□□ -0.2
TNFAIP3-202ENST00000420009 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
TNFAIP3-202ENST00000420009 ZNF790Q6PG37 636 aa13.83□□□□□ -0.2
TNFAIP3-202ENST00000420009 CAMTA2O94983 1202 aa13.82□□□□□ -0.2
TNFAIP3-202ENST00000420009 POTEIP0CG38 1075 aa13.82□□□□□ -0.2
TNFAIP3-202ENST00000420009 POTEJP0CG39 1038 aa13.82□□□□□ -0.2
TNFAIP3-202ENST00000420009 STYK1Q6J9G0 422 aa13.82□□□□□ -0.2
TNFAIP3-202ENST00000420009 CCDC24Q8N4L8 307 aa13.82□□□□□ -0.2
TNFAIP3-202ENST00000420009 CNBD1Q8NA66 436 aa13.82□□□□□ -0.2
TNFAIP3-202ENST00000420009 IL17REQ8NFR9 667 aa13.82□□□□□ -0.2
TNFAIP3-202ENST00000420009 TEX13AQ9BXU3 409 aaPredicted RBP13.82□□□□□ -0.2
TNFAIP3-202ENST00000420009 TBC1D2BQ9UPU7 963 aa13.82□□□□□ -0.2
TNFAIP3-202ENST00000420009 SLX4Q8IY92 1834 aa13.81□□□□□ -0.2
TNFAIP3-202ENST00000420009 DDNO94850 711 aaPredicted RBP13.81□□□□□ -0.2
TNFAIP3-202ENST00000420009 SRGNP10124 158 aa13.81□□□□□ -0.2
TNFAIP3-202ENST00000420009 PRPF40BQ6NWY9 871 aaKnown RBP13.81□□□□□ -0.2
TNFAIP3-202ENST00000420009 CNKSR1Q969H4 720 aa13.81□□□□□ -0.2
TNFAIP3-202ENST00000420009 MKRN1Q9UHC7 482 aaKnown RBP13.81□□□□□ -0.2
TNFAIP3-202ENST00000420009 CNTNAP1P78357 1384 aa13.81□□□□□ -0.2
TNFAIP3-202ENST00000420009 CEMIPQ8WUJ3 1361 aa13.81□□□□□ -0.2
TNFAIP3-202ENST00000420009 TEFQ10587 303 aa13.8□□□□□ -0.2
TNFAIP3-202ENST00000420009 SOGA3Q5TF21 947 aa13.8□□□□□ -0.2
TNFAIP3-202ENST00000420009 L3MBTL3Q96JM7 780 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP3-202ENST00000420009 ZNF330Q9Y3S2 320 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP3-202ENST00000420009 KIF7Q2M1P5 1343 aa13.8□□□□□ -0.2
TNFAIP3-202ENST00000420009 PASKQ96RG2 1323 aa13.8□□□□□ -0.2
TNFAIP3-202ENST00000420009 GNAT3A8MTJ3 354 aa13.79□□□□□ -0.2
TNFAIP3-202ENST00000420009 ZBTB22O15209 634 aa13.79□□□□□ -0.2
TNFAIP3-202ENST00000420009 PER1O15534 1290 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP3-202ENST00000420009 A1BGP04217 495 aa13.79□□□□□ -0.2
TNFAIP3-202ENST00000420009 GAS2L2Q8NHY3 880 aa13.79□□□□□ -0.2
TNFAIP3-202ENST00000420009 C7orf43Q8WVR3 580 aa13.79□□□□□ -0.2
TNFAIP3-202ENST00000420009 MASTLQ96GX5 879 aa13.79□□□□□ -0.2
TNFAIP3-202ENST00000420009 FMNL2Q96PY5 1086 aa13.79□□□□□ -0.2
TNFAIP3-202ENST00000420009 SETDB2Q96T68 719 aa13.79□□□□□ -0.2
TNFAIP3-202ENST00000420009 CACNA1SQ13698 1873 aa13.78□□□□□ -0.2
TNFAIP3-202ENST00000420009 IQCA1LA6NCM1 817 aa13.78□□□□□ -0.2
TNFAIP3-202ENST00000420009 ST5P78524 1137 aa13.78□□□□□ -0.2
TNFAIP3-202ENST00000420009 EVX2Q03828 476 aa13.78□□□□□ -0.2
TNFAIP3-202ENST00000420009 LDHDQ86WU2 507 aa13.78□□□□□ -0.2
TNFAIP3-202ENST00000420009 ADAMTSL1Q8N6G6 1762 aa13.78□□□□□ -0.2
TNFAIP3-202ENST00000420009 SCN4AP35499 1836 aa13.78□□□□□ -0.2
TNFAIP3-202ENST00000420009 FOXN1O15353 648 aa13.77□□□□□ -0.21
TNFAIP3-202ENST00000420009 DZIP3Q86Y13 1208 aaKnown RBP13.77□□□□□ -0.21
TNFAIP3-202ENST00000420009 PCGF6Q9BYE7 350 aa13.77□□□□□ -0.21
TNFAIP3-202ENST00000420009 TAF1DQ9H5J8 278 aaPredicted RBP13.77□□□□□ -0.21
TNFAIP3-202ENST00000420009 NPC1L1Q9UHC9 1359 aa13.77□□□□□ -0.21
TNFAIP3-202ENST00000420009 CCDC93Q567U6 631 aa13.76□□□□□ -0.21
TNFAIP3-202ENST00000420009 CC2D1BQ5T0F9 858 aaKnown RBP13.76□□□□□ -0.21
TNFAIP3-202ENST00000420009 PRDM10Q9NQV6 1147 aa13.76□□□□□ -0.21
TNFAIP3-202ENST00000420009 ZNF541Q9H0D2 1346 aa13.75□□□□□ -0.21
TNFAIP3-202ENST00000420009 KLRG2A4D1S0 409 aaPredicted RBP13.75□□□□□ -0.21
TNFAIP3-202ENST00000420009 NPHP1O15259 732 aa13.75□□□□□ -0.21
TNFAIP3-202ENST00000420009 KCNQ3O43525 872 aa13.75□□□□□ -0.21
TNFAIP3-202ENST00000420009 ITGBL1O95965 494 aaPredicted RBP13.75□□□□□ -0.21
TNFAIP3-202ENST00000420009 CLEC4GQ6UXB4 293 aa13.75□□□□□ -0.21
TNFAIP3-202ENST00000420009 NPM2Q86SE8 214 aaKnown RBP13.75□□□□□ -0.21
TNFAIP3-202ENST00000420009 SNED1Q8TER0 1413 aa13.74□□□□□ -0.21
TNFAIP3-202ENST00000420009 U2SURPO15042 1029 aaKnown RBP13.74□□□□□ -0.21
TNFAIP3-202ENST00000420009 NPR1P16066 1061 aa13.74□□□□□ -0.21
TNFAIP3-202ENST00000420009 FKBP4Q02790 459 aaKnown RBP eCLIP13.74□□□□□ -0.21
TNFAIP3-202ENST00000420009 TMEM88BA6NKF7 163 aa13.73□□□□□ -0.21
TNFAIP3-202ENST00000420009 BTBD11A6QL63 1104 aa13.73□□□□□ -0.21
TNFAIP3-202ENST00000420009 RGL2O15211 777 aa13.73□□□□□ -0.21
TNFAIP3-202ENST00000420009 PIP4K2AP48426 406 aaPredicted RBP13.73□□□□□ -0.21
TNFAIP3-202ENST00000420009 VEGFBP49765 207 aa13.73□□□□□ -0.21
TNFAIP3-202ENST00000420009 NBPF5PQ86XG9 351 aaPredicted RBP13.73□□□□□ -0.21
TNFAIP3-202ENST00000420009 ZNF652Q9Y2D9 606 aa13.73□□□□□ -0.21
TNFAIP3-202ENST00000420009 USP16Q9Y5T5 823 aa13.73□□□□□ -0.21
TNFAIP3-202ENST00000420009 PRAMEF22A3QJZ6 481 aa13.72□□□□□ -0.21
TNFAIP3-202ENST00000420009 ATXN8OSP0DMR3 200 aa13.72□□□□□ -0.21
TNFAIP3-202ENST00000420009 CTCFP49711 727 aaPredicted RBP13.72□□□□□ -0.21
TNFAIP3-202ENST00000420009 PHACTR3Q96KR7 559 aa13.72□□□□□ -0.21
TNFAIP3-202ENST00000420009 ZNF277Q9NRM2 450 aaPredicted RBP13.72□□□□□ -0.21
TNFAIP3-202ENST00000420009 WBP1LQ9NX94 342 aa13.72□□□□□ -0.21
TNFAIP3-202ENST00000420009 HACL1Q9UJ83 578 aa13.72□□□□□ -0.21
TNFAIP3-202ENST00000420009 SPDYE2BA6NHP3 402 aa13.71□□□□□ -0.21
TNFAIP3-202ENST00000420009 SPDYE6P0CI01 402 aa13.71□□□□□ -0.21
TNFAIP3-202ENST00000420009 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
TNFAIP3-202ENST00000420009 OLFM4Q6UX06 510 aa13.71□□□□□ -0.21
TNFAIP3-202ENST00000420009 AIDAQ96BJ3 306 aa13.71□□□□□ -0.21
TNFAIP3-202ENST00000420009 RSPH6AQ9H0K4 717 aa13.71□□□□□ -0.21
TNFAIP3-202ENST00000420009 RASSF10A6NK89 507 aa13.7□□□□□ -0.22
TNFAIP3-202ENST00000420009 NBPF26B4DH59 902 aa13.7□□□□□ -0.22
TNFAIP3-202ENST00000420009 FZD9O00144 591 aa13.7□□□□□ -0.22
TNFAIP3-202ENST00000420009 SNRPA1P09661 255 aaKnown RBP13.7□□□□□ -0.22
TNFAIP3-202ENST00000420009 PRKAR2BP31323 418 aa13.7□□□□□ -0.22
TNFAIP3-202ENST00000420009 EPHX2P34913 555 aa13.7□□□□□ -0.22
TNFAIP3-202ENST00000420009 EAPPQ56P03 285 aaPredicted RBP13.7□□□□□ -0.22
TNFAIP3-202ENST00000420009 NBPF10Q6P3W6 841 aaKnown RBP13.7□□□□□ -0.22
TNFAIP3-202ENST00000420009 RTKN2Q8IZC4 609 aa13.7□□□□□ -0.22
TNFAIP3-202ENST00000420009 NBPF15Q8N660 670 aa13.7□□□□□ -0.22
TNFAIP3-202ENST00000420009 THSD7BQ9C0I4 1608 aa13.7□□□□□ -0.22
TNFAIP3-202ENST00000420009 RNF123Q5XPI4 1314 aa13.69□□□□□ -0.22
TNFAIP3-202ENST00000420009 IARSP41252 1262 aaKnown RBP13.69□□□□□ -0.22
TNFAIP3-202ENST00000420009 TPTE2Q6XPS3 522 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms