RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 JMYQ8N9B5 988 aa16.93■□□□□ 0.3
HLA-DMB-258ENST00000418107 BCL2L12Q9HB09 334 aa16.93■□□□□ 0.3
HLA-DMB-258ENST00000418107 IFT57Q9NWB7 429 aa16.93■□□□□ 0.3
HLA-DMB-258ENST00000418107 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
HLA-DMB-258ENST00000418107 SERPINB2P05120 415 aa16.92■□□□□ 0.3
HLA-DMB-258ENST00000418107 PRELPP51888 382 aa16.92■□□□□ 0.3
HLA-DMB-258ENST00000418107 EXOSC9Q06265 439 aaKnown RBP16.92■□□□□ 0.3
HLA-DMB-258ENST00000418107 ERICH6BQ5W0A0 696 aa16.92■□□□□ 0.3
HLA-DMB-258ENST00000418107 MCM10Q7L590 875 aa16.92■□□□□ 0.3
HLA-DMB-258ENST00000418107 SMC1BQ8NDV3 1235 aa16.92■□□□□ 0.3
HLA-DMB-258ENST00000418107 AFDNP55196 1824 aaKnown RBP16.92■□□□□ 0.3
HLA-DMB-258ENST00000418107 NRXN2Q9P2S2 1712 aa16.92■□□□□ 0.3
HLA-DMB-258ENST00000418107 PCNTO95613 3336 aa16.91■□□□□ 0.3
HLA-DMB-258ENST00000418107 ZC3H4Q9UPT8 1303 aaKnown RBP16.91■□□□□ 0.3
HLA-DMB-258ENST00000418107 CARMIL3Q8ND23 1372 aa16.9■□□□□ 0.3
HLA-DMB-258ENST00000418107 HTATSF1O43719 755 aaKnown RBP16.9■□□□□ 0.3
HLA-DMB-258ENST00000418107 CT47B1P0C2W7 299 aaPredicted RBP16.9■□□□□ 0.3
HLA-DMB-258ENST00000418107 LMNB1P20700 586 aa16.9■□□□□ 0.3
HLA-DMB-258ENST00000418107 COL13A1Q5TAT6 717 aaPredicted RBP16.9■□□□□ 0.3
HLA-DMB-258ENST00000418107 C2CD5Q86YS7 1000 aa16.9■□□□□ 0.3
HLA-DMB-258ENST00000418107 PLIN1O60240 522 aa16.89■□□□□ 0.3
HLA-DMB-258ENST00000418107 CANXP27824 592 aaKnown RBP16.89■□□□□ 0.3
HLA-DMB-258ENST00000418107 TTLL6Q8N841 843 aa16.89■□□□□ 0.3
HLA-DMB-258ENST00000418107 CFAP44Q96MT7 982 aa16.89■□□□□ 0.3
HLA-DMB-258ENST00000418107 GLTPD2A6NH11 291 aa16.89■□□□□ 0.29
HLA-DMB-258ENST00000418107 BICDL1Q6ZP65 573 aa16.89■□□□□ 0.29
HLA-DMB-258ENST00000418107 VSIG10Q8N0Z9 540 aa16.89■□□□□ 0.29
HLA-DMB-258ENST00000418107 DLEC1Q9Y238 1755 aa16.88■□□□□ 0.29
HLA-DMB-258ENST00000418107 H0YIN7 160 aa16.88■□□□□ 0.29
HLA-DMB-258ENST00000418107 NFKBIEO00221 500 aa16.88■□□□□ 0.29
HLA-DMB-258ENST00000418107 VEGFAP15692 232 aaPredicted RBP16.88■□□□□ 0.29
HLA-DMB-258ENST00000418107 MBIPQ9NS73 344 aa16.88■□□□□ 0.29
HLA-DMB-258ENST00000418107 BCAR3O75815 825 aa16.87■□□□□ 0.29
HLA-DMB-258ENST00000418107 ZNF853P0CG23 659 aa16.87■□□□□ 0.29
HLA-DMB-258ENST00000418107 TIAM2Q8IVF5 1701 aa16.86■□□□□ 0.29
HLA-DMB-258ENST00000418107 UBR2Q8IWV8 1755 aa16.86■□□□□ 0.29
HLA-DMB-258ENST00000418107 RARSP54136 660 aaKnown RBP16.86■□□□□ 0.29
HLA-DMB-258ENST00000418107 EIF5P55010 431 aaKnown RBP16.86■□□□□ 0.29
HLA-DMB-258ENST00000418107 PPP4R2Q9NY27 417 aa16.86■□□□□ 0.29
HLA-DMB-258ENST00000418107 STARD3NLO95772 234 aa16.85■□□□□ 0.29
HLA-DMB-258ENST00000418107 TBC1D9BQ66K14 1250 aa16.85■□□□□ 0.29
HLA-DMB-258ENST00000418107 TTC5Q8N0Z6 440 aa16.85■□□□□ 0.29
HLA-DMB-258ENST00000418107 CCDC24Q8N4L8 307 aa16.84■□□□□ 0.29
HLA-DMB-258ENST00000418107 FRAT1Q92837 279 aaPredicted RBP16.84■□□□□ 0.29
HLA-DMB-258ENST00000418107 ZNF622Q969S3 477 aaKnown RBP eCLIP16.84■□□□□ 0.29
HLA-DMB-258ENST00000418107 SMC4Q9NTJ3 1288 aa16.84■□□□□ 0.29
HLA-DMB-258ENST00000418107 ZNF219Q9P2Y4 722 aaPredicted RBP16.84■□□□□ 0.29
HLA-DMB-258ENST00000418107 TSPYL4Q9UJ04 414 aa16.84■□□□□ 0.29
HLA-DMB-258ENST00000418107 SIPA1L3O60292 1781 aaPredicted RBP16.84■□□□□ 0.29
HLA-DMB-258ENST00000418107 A0A087WZG4 1122 aa16.83■□□□□ 0.28
HLA-DMB-258ENST00000418107 CHL1O00533 1208 aa16.83■□□□□ 0.28
HLA-DMB-258ENST00000418107 CAPN15O75808 1086 aa16.83■□□□□ 0.28
HLA-DMB-258ENST00000418107 ZNF496Q96IT1 587 aaPredicted RBP16.83■□□□□ 0.28
HLA-DMB-258ENST00000418107 BCL2L13Q9BXK5 485 aa16.83■□□□□ 0.28
HLA-DMB-258ENST00000418107 ZNF330Q9Y3S2 320 aaPredicted RBP16.83■□□□□ 0.28
HLA-DMB-258ENST00000418107 POTECB2RU33 542 aa16.82■□□□□ 0.28
HLA-DMB-258ENST00000418107 ELL2O00472 640 aaPredicted RBP16.82■□□□□ 0.28
HLA-DMB-258ENST00000418107 TNS4Q8IZW8 715 aa16.82■□□□□ 0.28
HLA-DMB-258ENST00000418107 MIS18AQ9NYP9 233 aa16.82■□□□□ 0.28
HLA-DMB-258ENST00000418107 TBC1D2BQ9UPU7 963 aa16.82■□□□□ 0.28
HLA-DMB-258ENST00000418107 HEG1Q9ULI3 1381 aa16.82■□□□□ 0.28
HLA-DMB-258ENST00000418107 CCDC88AQ3V6T2 1871 aa16.82■□□□□ 0.28
HLA-DMB-258ENST00000418107 ANKRD31Q8N7Z5 1873 aa16.82■□□□□ 0.28
HLA-DMB-258ENST00000418107 C21orf2O43822 256 aa16.81■□□□□ 0.28
HLA-DMB-258ENST00000418107 TEFQ10587 303 aa16.81■□□□□ 0.28
HLA-DMB-258ENST00000418107 TAF7Q15545 349 aaPredicted RBP16.81■□□□□ 0.28
HLA-DMB-258ENST00000418107 PRR5LQ6MZQ0 368 aa16.81■□□□□ 0.28
HLA-DMB-258ENST00000418107 IL17REQ8NFR9 667 aa16.81■□□□□ 0.28
HLA-DMB-258ENST00000418107 BRIP1Q9BX63 1249 aa16.81■□□□□ 0.28
HLA-DMB-258ENST00000418107 SCN7AQ01118 1682 aa16.81■□□□□ 0.28
HLA-DMB-258ENST00000418107 HSPA1AP0DMV8 641 aaKnown RBP16.8■□□□□ 0.28
HLA-DMB-258ENST00000418107 HSPA1BP0DMV9 641 aaKnown RBP16.8■□□□□ 0.28
HLA-DMB-258ENST00000418107 PDE6BP35913 854 aa16.8■□□□□ 0.28
HLA-DMB-258ENST00000418107 TWISTNBQ3B726 338 aaPredicted RBP16.8■□□□□ 0.28
HLA-DMB-258ENST00000418107 DPY19L2Q6NUT2 758 aa16.8■□□□□ 0.28
HLA-DMB-258ENST00000418107 ZNF790Q6PG37 636 aa16.8■□□□□ 0.28
HLA-DMB-258ENST00000418107 EXOC6Q8TAG9 804 aa16.8■□□□□ 0.28
HLA-DMB-258ENST00000418107 ZNF428Q96B54 188 aa16.8■□□□□ 0.28
HLA-DMB-258ENST00000418107 COL11A2P13942 1736 aaPredicted RBP16.8■□□□□ 0.28
HLA-DMB-258ENST00000418107 ERFEQ4G0M1 354 aa16.79■□□□□ 0.28
HLA-DMB-258ENST00000418107 C8orf58Q8NAV2 365 aa16.79■□□□□ 0.28
HLA-DMB-258ENST00000418107 SSH1Q8WYL5 1049 aa16.79■□□□□ 0.28
HLA-DMB-258ENST00000418107 CRBNQ96SW2 442 aa16.79■□□□□ 0.28
HLA-DMB-258ENST00000418107 VAMP4O75379 141 aa16.78■□□□□ 0.28
HLA-DMB-258ENST00000418107 IL6STP40189 918 aaPredicted RBP16.78■□□□□ 0.28
HLA-DMB-258ENST00000418107 ALDH1L2Q3SY69 923 aa16.78■□□□□ 0.28
HLA-DMB-258ENST00000418107 C20orf194Q5TEA3 1177 aa16.78■□□□□ 0.28
HLA-DMB-258ENST00000418107 TEX13AQ9BXU3 409 aaPredicted RBP16.78■□□□□ 0.28
HLA-DMB-258ENST00000418107 PDZRN3Q9UPQ7 1066 aa16.78■□□□□ 0.28
HLA-DMB-258ENST00000418107 A1BGP04217 495 aa16.77■□□□□ 0.28
HLA-DMB-258ENST00000418107 MS4A1P11836 297 aa16.77■□□□□ 0.28
HLA-DMB-258ENST00000418107 TSPYL6Q8N831 410 aa16.77■□□□□ 0.28
HLA-DMB-258ENST00000418107 BABAM1Q9NWV8 329 aa16.77■□□□□ 0.28
HLA-DMB-258ENST00000418107 FER1L6Q2WGJ9 1857 aa16.77■□□□□ 0.27
HLA-DMB-258ENST00000418107 NPHP1O15259 732 aa16.77■□□□□ 0.27
HLA-DMB-258ENST00000418107 IPO8O15397 1037 aaKnown RBP16.77■□□□□ 0.27
HLA-DMB-258ENST00000418107 CAMTA2O94983 1202 aa16.77■□□□□ 0.27
HLA-DMB-258ENST00000418107 ZKSCAN2Q63HK3 967 aa16.77■□□□□ 0.27
HLA-DMB-258ENST00000418107 CNBD1Q8NA66 436 aa16.77■□□□□ 0.27
HLA-DMB-258ENST00000418107 CCDC136Q96JN2 1154 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms