RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
SMPD4P1-201ENST00000416717 MFAP1P55081 439 aaKnown RBP13.23□□□□□ -0.29
SMPD4P1-201ENST00000416717 ARXQ96QS3 562 aa13.23□□□□□ -0.29
SMPD4P1-201ENST00000416717 THRAP3Q9Y2W1 955 aaKnown RBP13.23□□□□□ -0.29
SMPD4P1-201ENST00000416717 BMP2KLQ5H9B9 411 aa13.23□□□□□ -0.29
SMPD4P1-201ENST00000416717 UNC5CLQ8IV45 518 aa13.23□□□□□ -0.29
SMPD4P1-201ENST00000416717 MARCH10Q8NA82 808 aaPredicted RBP13.23□□□□□ -0.29
SMPD4P1-201ENST00000416717 SSH3Q8TE77 659 aa13.23□□□□□ -0.29
SMPD4P1-201ENST00000416717 SUCLG2Q96I99 432 aa13.23□□□□□ -0.29
SMPD4P1-201ENST00000416717 LRRCC1Q9C099 1032 aa13.23□□□□□ -0.29
SMPD4P1-201ENST00000416717 ZBTB3Q9H5J0 574 aa13.23□□□□□ -0.29
SMPD4P1-201ENST00000416717 BCL9O00512 1426 aa13.22□□□□□ -0.29
SMPD4P1-201ENST00000416717 GSPT1P15170 499 aaKnown RBP13.22□□□□□ -0.29
SMPD4P1-201ENST00000416717 TSHZ3Q63HK5 1081 aa13.22□□□□□ -0.29
SMPD4P1-201ENST00000416717 CDCA7Q9BWT1 371 aaPredicted RBP13.22□□□□□ -0.29
SMPD4P1-201ENST00000416717 IL1RAPL2Q9NP60 686 aa13.22□□□□□ -0.29
SMPD4P1-201ENST00000416717 GCKRQ14397 625 aa13.22□□□□□ -0.29
SMPD4P1-201ENST00000416717 RTL5Q5HYW3 569 aaPredicted RBP13.22□□□□□ -0.29
SMPD4P1-201ENST00000416717 BICC1Q9H694 974 aaKnown RBP13.22□□□□□ -0.29
SMPD4P1-201ENST00000416717 IBTKQ9P2D0 1353 aaPredicted RBP13.21□□□□□ -0.29
SMPD4P1-201ENST00000416717 POLA2Q14181 598 aa13.21□□□□□ -0.29
SMPD4P1-201ENST00000416717 PLBD2Q8NHP8 589 aa13.21□□□□□ -0.29
SMPD4P1-201ENST00000416717 KAZALD1Q96I82 304 aa13.2□□□□□ -0.3
SMPD4P1-201ENST00000416717 SLC4A9Q96Q91 983 aa13.2□□□□□ -0.3
SMPD4P1-201ENST00000416717 UPF2Q9HAU5 1272 aaKnown RBP13.2□□□□□ -0.3
SMPD4P1-201ENST00000416717 PA2G4Q9UQ80 394 aaKnown RBP13.2□□□□□ -0.3
SMPD4P1-201ENST00000416717 ERBB4Q15303 1308 aa13.2□□□□□ -0.3
SMPD4P1-201ENST00000416717 OS9Q13438 667 aaPredicted RBP13.2□□□□□ -0.3
SMPD4P1-201ENST00000416717 TTC22Q5TAA0 569 aa13.2□□□□□ -0.3
SMPD4P1-201ENST00000416717 UBE3BQ7Z3V4 1068 aa13.2□□□□□ -0.3
SMPD4P1-201ENST00000416717 BCL9LQ86UU0 1499 aa13.2□□□□□ -0.3
SMPD4P1-201ENST00000416717 LRP6O75581 1613 aa13.2□□□□□ -0.3
SMPD4P1-201ENST00000416717 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.19□□□□□ -0.3
SMPD4P1-201ENST00000416717 HSPA1LP34931 641 aa13.19□□□□□ -0.3
SMPD4P1-201ENST00000416717 SLC4A3P48751 1232 aa13.19□□□□□ -0.3
SMPD4P1-201ENST00000416717 NOP58Q9Y2X3 529 aaKnown RBP13.19□□□□□ -0.3
SMPD4P1-201ENST00000416717 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
SMPD4P1-201ENST00000416717 A0A087WZG4 1122 aa13.19□□□□□ -0.3
SMPD4P1-201ENST00000416717 EPHA10Q5JZY3 1008 aa13.19□□□□□ -0.3
SMPD4P1-201ENST00000416717 MEX3CQ5U5Q3 659 aaKnown RBP13.19□□□□□ -0.3
SMPD4P1-201ENST00000416717 BARGINQ6ZT62 677 aa13.19□□□□□ -0.3
SMPD4P1-201ENST00000416717 NUTM1Q86Y26 1132 aa13.19□□□□□ -0.3
SMPD4P1-201ENST00000416717 USP21Q9UK80 565 aa13.19□□□□□ -0.3
SMPD4P1-201ENST00000416717 STARD3NLO95772 234 aa13.18□□□□□ -0.3
SMPD4P1-201ENST00000416717 UTYO14607 1347 aa13.18□□□□□ -0.3
SMPD4P1-201ENST00000416717 KCNQ2O43526 872 aa13.18□□□□□ -0.3
SMPD4P1-201ENST00000416717 PDE1AP54750 535 aa13.18□□□□□ -0.3
SMPD4P1-201ENST00000416717 TBC1D9Q6ZT07 1266 aa13.18□□□□□ -0.3
SMPD4P1-201ENST00000416717 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
SMPD4P1-201ENST00000416717 KLHDC4Q8TBB5 520 aa13.18□□□□□ -0.3
SMPD4P1-201ENST00000416717 RHPN1Q8TCX5 695 aa13.18□□□□□ -0.3
SMPD4P1-201ENST00000416717 VPS72Q15906 364 aa13.17□□□□□ -0.3
SMPD4P1-201ENST00000416717 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
SMPD4P1-201ENST00000416717 HDAC5Q9UQL6 1122 aa13.17□□□□□ -0.3
SMPD4P1-201ENST00000416717 SDSP20132 328 aa13.16□□□□□ -0.3
SMPD4P1-201ENST00000416717 MTX1Q13505 466 aa13.16□□□□□ -0.3
SMPD4P1-201ENST00000416717 DDRGK1Q96HY6 314 aa13.16□□□□□ -0.3
SMPD4P1-201ENST00000416717 SIL1Q9H173 461 aa13.16□□□□□ -0.3
SMPD4P1-201ENST00000416717 RAB11FIP3O75154 756 aa13.16□□□□□ -0.3
SMPD4P1-201ENST00000416717 CYP19A1P11511 503 aaPredicted RBP13.16□□□□□ -0.3
SMPD4P1-201ENST00000416717 MX1P20591 662 aa13.16□□□□□ -0.3
SMPD4P1-201ENST00000416717 FAM182BQ5T319 152 aa13.16□□□□□ -0.3
SMPD4P1-201ENST00000416717 TBC1D32Q96NH3 1257 aa13.16□□□□□ -0.3
SMPD4P1-201ENST00000416717 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
SMPD4P1-201ENST00000416717 KIF1BPQ96EK5 621 aa13.15□□□□□ -0.3
SMPD4P1-201ENST00000416717 C22orf23Q9BZE7 217 aa13.15□□□□□ -0.3
SMPD4P1-201ENST00000416717 ZBTB1Q9Y2K1 713 aa13.15□□□□□ -0.3
SMPD4P1-201ENST00000416717 SPATA31A6Q5VVP1 1343 aa13.15□□□□□ -0.3
SMPD4P1-201ENST00000416717 CDC45O75419 566 aa13.15□□□□□ -0.3
SMPD4P1-201ENST00000416717 TJP1Q07157 1748 aa13.15□□□□□ -0.3
SMPD4P1-201ENST00000416717 CHMP3Q9Y3E7 222 aa13.15□□□□□ -0.3
SMPD4P1-201ENST00000416717 KIF6Q6ZMV9 814 aa13.14□□□□□ -0.31
SMPD4P1-201ENST00000416717 CWC25Q9NXE8 425 aaPredicted RBP13.14□□□□□ -0.31
SMPD4P1-201ENST00000416717 SALL3Q9BXA9 1300 aa13.14□□□□□ -0.31
SMPD4P1-201ENST00000416717 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
SMPD4P1-201ENST00000416717 HSP90AB4PQ58FF6 505 aa13.13□□□□□ -0.31
SMPD4P1-201ENST00000416717 OSBPL3Q9H4L5 887 aa13.13□□□□□ -0.31
SMPD4P1-201ENST00000416717 AK9Q5TCS8 1911 aa13.13□□□□□ -0.31
SMPD4P1-201ENST00000416717 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
SMPD4P1-201ENST00000416717 TRIM6-TRIM34B2RNG4 842 aa13.13□□□□□ -0.31
SMPD4P1-201ENST00000416717 MAP4K4O95819 1239 aaPredicted RBP13.13□□□□□ -0.31
SMPD4P1-201ENST00000416717 GPTP24298 496 aa13.13□□□□□ -0.31
SMPD4P1-201ENST00000416717 G3BP1Q13283 466 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMPD4P1-201ENST00000416717 HLFQ16534 295 aa13.13□□□□□ -0.31
SMPD4P1-201ENST00000416717 PTF1AQ7RTS3 328 aa13.13□□□□□ -0.31
SMPD4P1-201ENST00000416717 RILPL2Q969X0 211 aa13.13□□□□□ -0.31
SMPD4P1-201ENST00000416717 TBC1D2BQ9UPU7 963 aa13.13□□□□□ -0.31
SMPD4P1-201ENST00000416717 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.13□□□□□ -0.31
SMPD4P1-201ENST00000416717 LOC102724428A0A0B4J2F2 783 aa13.12□□□□□ -0.31
SMPD4P1-201ENST00000416717 CASP7P55210 303 aa13.12□□□□□ -0.31
SMPD4P1-201ENST00000416717 KCNQ4P56696 695 aa13.12□□□□□ -0.31
SMPD4P1-201ENST00000416717 SIK1P57059 783 aa13.12□□□□□ -0.31
SMPD4P1-201ENST00000416717 LMBR1LQ6UX01 489 aa13.12□□□□□ -0.31
SMPD4P1-201ENST00000416717 AFF2P51816 1311 aa13.12□□□□□ -0.31
SMPD4P1-201ENST00000416717 H7C1W4 665 aa13.11□□□□□ -0.31
SMPD4P1-201ENST00000416717 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
SMPD4P1-201ENST00000416717 NUP98P52948 1817 aa13.11□□□□□ -0.31
SMPD4P1-201ENST00000416717 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
SMPD4P1-201ENST00000416717 PALLDQ8WX93 1383 aa13.11□□□□□ -0.31
SMPD4P1-201ENST00000416717 SASH1O94885 1247 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms