RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 XAGE3Q8WTP9 111 aa20.19■□□□□ 0.82
PHRF1-202ENST00000413872 HMG20BQ9P0W2 317 aa20.19■□□□□ 0.82
PHRF1-202ENST00000413872 IFIT3O14879 490 aaKnown RBP20.18■□□□□ 0.82
PHRF1-202ENST00000413872 GCP02774 474 aa20.18■□□□□ 0.82
PHRF1-202ENST00000413872 HLA-DOAP06340 250 aa20.18■□□□□ 0.82
PHRF1-202ENST00000413872 ZGPATQ8N5A5 531 aaKnown RBP20.18■□□□□ 0.82
PHRF1-202ENST00000413872 LIMCH1Q9UPQ0 1083 aa20.18■□□□□ 0.82
PHRF1-202ENST00000413872 UHRF1BP1Q6BDS2 1440 aa20.18■□□□□ 0.82
PHRF1-202ENST00000413872 HSP90AA2PQ14568 343 aaPredicted RBP20.18■□□□□ 0.82
PHRF1-202ENST00000413872 CCDC96Q2M329 555 aa20.18■□□□□ 0.82
PHRF1-202ENST00000413872 ANKRD18AQ8IVF6 992 aa20.18■□□□□ 0.82
PHRF1-202ENST00000413872 CDCA7Q9BWT1 371 aaPredicted RBP20.18■□□□□ 0.82
PHRF1-202ENST00000413872 UPF3BQ9BZI7 483 aaKnown RBP20.18■□□□□ 0.82
PHRF1-202ENST00000413872 KCNA6P17658 529 aa20.18■□□□□ 0.82
PHRF1-202ENST00000413872 CCDC12Q8WUD4 166 aaPredicted RBP20.18■□□□□ 0.82
PHRF1-202ENST00000413872 NLRP3Q96P20 1036 aa20.18■□□□□ 0.82
PHRF1-202ENST00000413872 DEF6Q9H4E7 631 aa20.18■□□□□ 0.82
PHRF1-202ENST00000413872 CHPF2Q9P2E5 772 aa20.18■□□□□ 0.82
PHRF1-202ENST00000413872 GOLIM4O00461 696 aa20.18■□□□□ 0.82
PHRF1-202ENST00000413872 KIF5BP33176 963 aa20.18■□□□□ 0.82
PHRF1-202ENST00000413872 DCAF5Q96JK2 942 aa20.18■□□□□ 0.82
PHRF1-202ENST00000413872 C8orf37Q96NL8 207 aa20.17■□□□□ 0.82
PHRF1-202ENST00000413872 NYXQ9GZU5 481 aa20.17■□□□□ 0.82
PHRF1-202ENST00000413872 COPS6Q7L5N1 327 aa20.17■□□□□ 0.82
PHRF1-202ENST00000413872 PIBF1Q8WXW3 757 aa20.17■□□□□ 0.82
PHRF1-202ENST00000413872 NCKAP5LQ9HCH0 1330 aa20.17■□□□□ 0.82
PHRF1-202ENST00000413872 PPP1R12BO60237 982 aaPredicted RBP20.16■□□□□ 0.82
PHRF1-202ENST00000413872 SETQ01105 290 aaPredicted RBP20.16■□□□□ 0.82
PHRF1-202ENST00000413872 CABP5Q9NP86 173 aa20.16■□□□□ 0.82
PHRF1-202ENST00000413872 PPP4R3BQ5MIZ7 849 aa20.16■□□□□ 0.82
PHRF1-202ENST00000413872 ZNF622Q969S3 477 aaKnown RBP eCLIP20.16■□□□□ 0.823e-7■■■■□ 25.2
PHRF1-202ENST00000413872 GOLGA8AA7E2F4 631 aa20.16■□□□□ 0.82
PHRF1-202ENST00000413872 GOLGA8BA8MQT2 603 aa20.16■□□□□ 0.82
PHRF1-202ENST00000413872 PARD3Q8TEW0 1356 aa20.15■□□□□ 0.82
PHRF1-202ENST00000413872 GRM8O00222 908 aa20.15■□□□□ 0.82
PHRF1-202ENST00000413872 SSRP1Q08945 709 aaKnown RBP20.15■□□□□ 0.82
PHRF1-202ENST00000413872 TMEM266Q2M3C6 531 aa20.15■□□□□ 0.82
PHRF1-202ENST00000413872 RHPN1Q8TCX5 695 aa20.15■□□□□ 0.82
PHRF1-202ENST00000413872 IP6K1Q92551 441 aa20.15■□□□□ 0.82
PHRF1-202ENST00000413872 CRNKL1Q9BZJ0 848 aaKnown RBP20.15■□□□□ 0.82
PHRF1-202ENST00000413872 ATP7AQ04656 1500 aa20.15■□□□□ 0.82
PHRF1-202ENST00000413872 DISP1Q96F81 1524 aa20.15■□□□□ 0.82
PHRF1-202ENST00000413872 TTLL5Q6EMB2 1281 aa20.15■□□□□ 0.82
PHRF1-202ENST00000413872 IL15P40933 162 aaPredicted RBP20.14■□□□□ 0.82
PHRF1-202ENST00000413872 HDAC1Q13547 482 aaPredicted RBP20.14■□□□□ 0.82
PHRF1-202ENST00000413872 MAP3K5Q99683 1374 aa20.14■□□□□ 0.82
PHRF1-202ENST00000413872 MYO1BO43795 1136 aa20.14■□□□□ 0.81
PHRF1-202ENST00000413872 CCDC178Q5BJE1 867 aa20.14■□□□□ 0.81
PHRF1-202ENST00000413872 MCM4P33991 863 aa20.14■□□□□ 0.81
PHRF1-202ENST00000413872 PCDH11XQ9BZA7 1347 aa20.14■□□□□ 0.81
PHRF1-202ENST00000413872 PCDH11YQ9BZA8 1340 aa20.14■□□□□ 0.81
PHRF1-202ENST00000413872 MAP3K11Q16584 847 aa20.14■□□□□ 0.81
PHRF1-202ENST00000413872 LINS1Q8NG48 757 aa20.14■□□□□ 0.81
PHRF1-202ENST00000413872 CCDC194A0A1B0GVG4 234 aa20.13■□□□□ 0.81
PHRF1-202ENST00000413872 TRIM21P19474 475 aaKnown RBP20.13■□□□□ 0.81
PHRF1-202ENST00000413872 DESP17661 470 aa20.13■□□□□ 0.81
PHRF1-202ENST00000413872 FBLN1P23142 703 aa20.13■□□□□ 0.81
PHRF1-202ENST00000413872 DNAI2Q9GZS0 605 aa20.13■□□□□ 0.81
PHRF1-202ENST00000413872 HSPA2P54652 639 aa20.13■□□□□ 0.81
PHRF1-202ENST00000413872 PPP4R3AQ6IN85 833 aa20.13■□□□□ 0.81
PHRF1-202ENST00000413872 PIK3C2GO75747 1445 aa20.13■□□□□ 0.81
PHRF1-202ENST00000413872 LMTK3Q96Q04 1460 aa20.13■□□□□ 0.81
PHRF1-202ENST00000413872 ATP2B3Q16720 1220 aa20.12■□□□□ 0.81
PHRF1-202ENST00000413872 MTHFSDQ2M296 383 aaKnown RBP20.12■□□□□ 0.81
PHRF1-202ENST00000413872 TESK2Q96S53 571 aa20.12■□□□□ 0.81
PHRF1-202ENST00000413872 MAPKBP1O60336 1514 aa20.12■□□□□ 0.81
PHRF1-202ENST00000413872 KIF20AO95235 890 aa20.12■□□□□ 0.81
PHRF1-202ENST00000413872 ANXA1P04083 346 aa20.12■□□□□ 0.81
PHRF1-202ENST00000413872 TRAF1Q13077 416 aa20.12■□□□□ 0.81
PHRF1-202ENST00000413872 TTLL12Q14166 644 aaPredicted RBP20.12■□□□□ 0.81
PHRF1-202ENST00000413872 PAF1Q8N7H5 531 aa20.12■□□□□ 0.81
PHRF1-202ENST00000413872 UTP14AQ9BVJ6 771 aaKnown RBP20.12■□□□□ 0.81
PHRF1-202ENST00000413872 ZNF219Q9P2Y4 722 aaPredicted RBP20.12■□□□□ 0.81
PHRF1-202ENST00000413872 DNMT1P26358 1616 aaKnown RBP20.12■□□□□ 0.81
PHRF1-202ENST00000413872 MFSD6Q6ZSS7 791 aa20.12■□□□□ 0.81
PHRF1-202ENST00000413872 NCOA7Q8NI08 942 aa20.12■□□□□ 0.81
PHRF1-202ENST00000413872 NEO1Q92859 1461 aa20.12■□□□□ 0.81
PHRF1-202ENST00000413872 NOM1Q5C9Z4 860 aaKnown RBP20.11■□□□□ 0.81
PHRF1-202ENST00000413872 ACSBG1Q96GR2 724 aa20.11■□□□□ 0.81
PHRF1-202ENST00000413872 SLC39A6Q13433 755 aa20.11■□□□□ 0.81
PHRF1-202ENST00000413872 TTC22Q5TAA0 569 aa20.11■□□□□ 0.81
PHRF1-202ENST00000413872 TPTE2Q6XPS3 522 aa20.11■□□□□ 0.81
PHRF1-202ENST00000413872 FEZ1Q99689 392 aa20.11■□□□□ 0.81
PHRF1-202ENST00000413872 TSPY2A6NKD2 308 aa20.1■□□□□ 0.81
PHRF1-202ENST00000413872 NIP7Q9Y221 180 aaKnown RBP eCLIP20.1■□□□□ 0.81
PHRF1-202ENST00000413872 NLRP5P59047 1200 aa20.1■□□□□ 0.81
PHRF1-202ENST00000413872 ANKRD44Q8N8A2 993 aa20.1■□□□□ 0.81
PHRF1-202ENST00000413872 SNRKQ9NRH2 765 aa20.1■□□□□ 0.81
PHRF1-202ENST00000413872 ADGRL2O95490 1459 aa20.1■□□□□ 0.81
PHRF1-202ENST00000413872 MAST1Q9Y2H9 1570 aa20.1■□□□□ 0.81
PHRF1-202ENST00000413872 A0A1W2PP64 1363 aa20.1■□□□□ 0.81
PHRF1-202ENST00000413872 ERLIN2O94905 339 aa20.1■□□□□ 0.81
PHRF1-202ENST00000413872 FERMT3Q86UX7 667 aa20.1■□□□□ 0.81
PHRF1-202ENST00000413872 HDAC9Q9UKV0 1011 aa20.1■□□□□ 0.81
PHRF1-202ENST00000413872 RTCBQ9Y3I0 505 aaKnown RBP20.1■□□□□ 0.81
PHRF1-202ENST00000413872 PBRM1Q86U86 1689 aa20.1■□□□□ 0.81
PHRF1-202ENST00000413872 HOXC9P31274 260 aa20.1■□□□□ 0.81
PHRF1-202ENST00000413872 TMEM67Q5HYA8 995 aa20.1■□□□□ 0.81
PHRF1-202ENST00000413872 MRPL50Q8N5N7 158 aaKnown RBP20.1■□□□□ 0.81
PHRF1-202ENST00000413872 CABLES1Q8TDN4 633 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms