RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 DLG5Q8TDM6 1919 aa17.45■□□□□ 0.38
PTPRN-203ENST00000412847 KIF7Q2M1P5 1343 aa17.45■□□□□ 0.38
PTPRN-203ENST00000412847 GNAT3A8MTJ3 354 aa17.44■□□□□ 0.38
PTPRN-203ENST00000412847 POTEIP0CG38 1075 aa17.44■□□□□ 0.38
PTPRN-203ENST00000412847 POTEJP0CG39 1038 aa17.44■□□□□ 0.38
PTPRN-203ENST00000412847 IL17REQ8NFR9 667 aa17.44■□□□□ 0.38
PTPRN-203ENST00000412847 FMNL2Q96PY5 1086 aa17.44■□□□□ 0.38
PTPRN-203ENST00000412847 TRPM7Q96QT4 1865 aa17.44■□□□□ 0.38
PTPRN-203ENST00000412847 CAMTA2O94983 1202 aa17.43■□□□□ 0.38
PTPRN-203ENST00000412847 SRGNP10124 158 aa17.43■□□□□ 0.38
PTPRN-203ENST00000412847 CC2D1BQ5T0F9 858 aaKnown RBP17.43■□□□□ 0.38
PTPRN-203ENST00000412847 MASTLQ96GX5 879 aa17.43■□□□□ 0.38
PTPRN-203ENST00000412847 CNTNAP1P78357 1384 aa17.42■□□□□ 0.38
PTPRN-203ENST00000412847 IQCA1LA6NCM1 817 aa17.42■□□□□ 0.38
PTPRN-203ENST00000412847 U2SURPO15042 1029 aaKnown RBP17.42■□□□□ 0.38
PTPRN-203ENST00000412847 A1BGP04217 495 aa17.42■□□□□ 0.38
PTPRN-203ENST00000412847 CEMIPQ8WUJ3 1361 aa17.41■□□□□ 0.38
PTPRN-203ENST00000412847 DZIP3Q86Y13 1208 aaKnown RBP17.41■□□□□ 0.38
PTPRN-203ENST00000412847 CCDC93Q567U6 631 aa17.4■□□□□ 0.38
PTPRN-203ENST00000412847 LDHDQ86WU2 507 aa17.4■□□□□ 0.38
PTPRN-203ENST00000412847 PASKQ96RG2 1323 aa17.4■□□□□ 0.38
PTPRN-203ENST00000412847 KDM3BQ7LBC6 1761 aa17.4■□□□□ 0.38
PTPRN-203ENST00000412847 PER1O15534 1290 aaPredicted RBP17.39■□□□□ 0.37
PTPRN-203ENST00000412847 L3MBTL3Q96JM7 780 aaPredicted RBP17.39■□□□□ 0.37
PTPRN-203ENST00000412847 BTBD11A6QL63 1104 aa17.38■□□□□ 0.37
PTPRN-203ENST00000412847 FOXN1O15353 648 aa17.38■□□□□ 0.37
PTPRN-203ENST00000412847 NBPF5PQ86XG9 351 aaPredicted RBP17.38■□□□□ 0.37
PTPRN-203ENST00000412847 TAF1DQ9H5J8 278 aaPredicted RBP17.38■□□□□ 0.37
PTPRN-203ENST00000412847 THSD7BQ9C0I4 1608 aa17.38■□□□□ 0.37
PTPRN-203ENST00000412847 NPC1L1Q9UHC9 1359 aa17.38■□□□□ 0.37
PTPRN-203ENST00000412847 KCNQ3O43525 872 aa17.37■□□□□ 0.37
PTPRN-203ENST00000412847 ZNF652Q9Y2D9 606 aa17.37■□□□□ 0.37
PTPRN-203ENST00000412847 NPR1P16066 1061 aa17.36■□□□□ 0.37
PTPRN-203ENST00000412847 PIP4K2AP48426 406 aaPredicted RBP17.36■□□□□ 0.37
PTPRN-203ENST00000412847 FKBP4Q02790 459 aaKnown RBP eCLIP17.36■□□□□ 0.37
PTPRN-203ENST00000412847 C7orf43Q8WVR3 580 aa17.36■□□□□ 0.37
PTPRN-203ENST00000412847 ZNF541Q9H0D2 1346 aa17.36■□□□□ 0.37
PTPRN-203ENST00000412847 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
PTPRN-203ENST00000412847 TMEM88BA6NKF7 163 aa17.35■□□□□ 0.37
PTPRN-203ENST00000412847 EAPPQ56P03 285 aaPredicted RBP17.35■□□□□ 0.37
PTPRN-203ENST00000412847 CLEC4GQ6UXB4 293 aa17.35■□□□□ 0.37
PTPRN-203ENST00000412847 AIDAQ96BJ3 306 aa17.35■□□□□ 0.37
PTPRN-203ENST00000412847 PRDM10Q9NQV6 1147 aa17.35■□□□□ 0.37
PTPRN-203ENST00000412847 USP16Q9Y5T5 823 aa17.35■□□□□ 0.37
PTPRN-203ENST00000412847 CNGB1Q14028 1251 aaPredicted RBP17.34■□□□□ 0.37
PTPRN-203ENST00000412847 HACL1Q9UJ83 578 aa17.34■□□□□ 0.37
PTPRN-203ENST00000412847 PRAMEF22A3QJZ6 481 aa17.33■□□□□ 0.36
PTPRN-203ENST00000412847 PRKAR2BP31323 418 aa17.33■□□□□ 0.36
PTPRN-203ENST00000412847 CTCFP49711 727 aaPredicted RBP17.33■□□□□ 0.36
PTPRN-203ENST00000412847 VEGFBP49765 207 aa17.33■□□□□ 0.36
PTPRN-203ENST00000412847 ZNF277Q9NRM2 450 aaPredicted RBP17.33■□□□□ 0.36
PTPRN-203ENST00000412847 CLEC11AQ9Y240 323 aa17.33■□□□□ 0.36
PTPRN-203ENST00000412847 ITGBL1O95965 494 aaPredicted RBP17.32■□□□□ 0.36
PTPRN-203ENST00000412847 EPHX2P34913 555 aa17.32■□□□□ 0.36
PTPRN-203ENST00000412847 TPTE2Q6XPS3 522 aa17.32■□□□□ 0.36
PTPRN-203ENST00000412847 CCER1Q8TC90 406 aaPredicted RBP17.32■□□□□ 0.36
PTPRN-203ENST00000412847 PHACTR3Q96KR7 559 aa17.32■□□□□ 0.36
PTPRN-203ENST00000412847 RSPH6AQ9H0K4 717 aa17.32■□□□□ 0.36
PTPRN-203ENST00000412847 NIP7Q9Y221 180 aaKnown RBP eCLIP17.32■□□□□ 0.36
PTPRN-203ENST00000412847 LAMB2P55268 1798 aa17.32■□□□□ 0.36
PTPRN-203ENST00000412847 ANKRD36CQ5JPF3 1778 aa17.32■□□□□ 0.36
PTPRN-203ENST00000412847 SNED1Q8TER0 1413 aa17.31■□□□□ 0.36
PTPRN-203ENST00000412847 RNF123Q5XPI4 1314 aa17.31■□□□□ 0.36
PTPRN-203ENST00000412847 KLRG2A4D1S0 409 aaPredicted RBP17.31■□□□□ 0.36
PTPRN-203ENST00000412847 RGL2O15211 777 aa17.31■□□□□ 0.36
PTPRN-203ENST00000412847 SNRPA1P09661 255 aaKnown RBP17.31■□□□□ 0.36
PTPRN-203ENST00000412847 IARSP41252 1262 aaKnown RBP17.31■□□□□ 0.36
PTPRN-203ENST00000412847 OLFM4Q6UX06 510 aa17.31■□□□□ 0.36
PTPRN-203ENST00000412847 RTKN2Q8IZC4 609 aa17.31■□□□□ 0.36
PTPRN-203ENST00000412847 COL4A5P29400 1685 aa17.3■□□□□ 0.36
PTPRN-203ENST00000412847 FAM177BA6PVY3 158 aa17.3■□□□□ 0.36
PTPRN-203ENST00000412847 PNMA8AQ86V59 439 aaPredicted RBP17.3■□□□□ 0.36
PTPRN-203ENST00000412847 CFAP53Q96M91 514 aa17.3■□□□□ 0.36
PTPRN-203ENST00000412847 RTF1Q92541 710 aaKnown RBP17.29■□□□□ 0.36
PTPRN-203ENST00000412847 NBPF26B4DH59 902 aa17.28■□□□□ 0.36
PTPRN-203ENST00000412847 FZD9O00144 591 aa17.28■□□□□ 0.36
PTPRN-203ENST00000412847 ALDH1B1P30837 517 aa17.28■□□□□ 0.36
PTPRN-203ENST00000412847 MAP1SQ66K74 1059 aaPredicted RBP17.28■□□□□ 0.36
PTPRN-203ENST00000412847 NBPF10Q6P3W6 841 aaKnown RBP17.28■□□□□ 0.36
PTPRN-203ENST00000412847 MCM10Q7L590 875 aa17.28■□□□□ 0.36
PTPRN-203ENST00000412847 NBPF15Q8N660 670 aa17.28■□□□□ 0.36
PTPRN-203ENST00000412847 WBP1LQ9NX94 342 aa17.28■□□□□ 0.36
PTPRN-203ENST00000412847 ABCC12Q96J65 1359 aa17.28■□□□□ 0.36
PTPRN-203ENST00000412847 RASSF10A6NK89 507 aa17.27■□□□□ 0.36
PTPRN-203ENST00000412847 GTF2E1P29083 439 aaPredicted RBP17.27■□□□□ 0.36
PTPRN-203ENST00000412847 LBX1P52954 281 aa17.27■□□□□ 0.36
PTPRN-203ENST00000412847 DEFB115Q30KQ5 88 aa17.27■□□□□ 0.36
PTPRN-203ENST00000412847 CNTROBQ8N137 903 aa17.27■□□□□ 0.36
PTPRN-203ENST00000412847 GPC2Q8N158 579 aa17.27■□□□□ 0.36
PTPRN-203ENST00000412847 SYNE4Q8N205 404 aa17.27■□□□□ 0.36
PTPRN-203ENST00000412847 PSMD1Q99460 953 aa17.26■□□□□ 0.35
PTPRN-203ENST00000412847 NUDCQ9Y266 331 aa17.26■□□□□ 0.35
PTPRN-203ENST00000412847 RIC1Q4ADV7 1423 aa17.26■□□□□ 0.35
PTPRN-203ENST00000412847 HSPA8P11142 646 aaKnown RBP17.25■□□□□ 0.35
PTPRN-203ENST00000412847 HLFQ16534 295 aa17.25■□□□□ 0.35
PTPRN-203ENST00000412847 JDP2Q8WYK2 163 aa17.25■□□□□ 0.35
PTPRN-203ENST00000412847 ABT1Q9ULW3 272 aaKnown RBP17.25■□□□□ 0.35
PTPRN-203ENST00000412847 WDR33Q9C0J8 1336 aaKnown RBP17.24■□□□□ 0.35
PTPRN-203ENST00000412847 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
PTPRN-203ENST00000412847 EIF6P56537 245 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms