RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 SUDS3Q9H7L9 328 aaPredicted RBP9.9□□□□□ -0.82
PBRM1-209ENST00000412587 RBM27Q9P2N5 1060 aaKnown RBP9.9□□□□□ -0.82
PBRM1-209ENST00000412587 ZBTB22O15209 634 aa9.9□□□□□ -0.82
PBRM1-209ENST00000412587 IBSPP21815 317 aaPredicted RBP9.9□□□□□ -0.82
PBRM1-209ENST00000412587 IGHMBP2P38935 993 aaKnown RBP9.9□□□□□ -0.82
PBRM1-209ENST00000412587 C20orf194Q5TEA3 1177 aa9.9□□□□□ -0.82
PBRM1-209ENST00000412587 CCDC73Q6ZRK6 1079 aa9.9□□□□□ -0.82
PBRM1-209ENST00000412587 RBSNQ9H1K0 784 aa9.9□□□□□ -0.82
PBRM1-209ENST00000412587 HOOK1Q9UJC3 728 aaKnown RBP9.9□□□□□ -0.82
PBRM1-209ENST00000412587 ZSCAN26Q16670 478 aa9.9□□□□□ -0.82
PBRM1-209ENST00000412587 CEP120Q8N960 986 aa9.9□□□□□ -0.82
PBRM1-209ENST00000412587 MAP4K4O95819 1239 aaPredicted RBP9.9□□□□□ -0.83
PBRM1-209ENST00000412587 MYCNP04198 464 aaPredicted RBP9.9□□□□□ -0.83
PBRM1-209ENST00000412587 IKQ13123 557 aaPredicted RBP9.9□□□□□ -0.83
PBRM1-209ENST00000412587 TSR1Q2NL82 804 aaKnown RBP9.9□□□□□ -0.83
PBRM1-209ENST00000412587 ZSCAN25Q6NSZ9 544 aa9.9□□□□□ -0.83
PBRM1-209ENST00000412587 FIBPO43427 364 aa9.89□□□□□ -0.83
PBRM1-209ENST00000412587 EZRP15311 586 aaKnown RBP9.89□□□□□ -0.83
PBRM1-209ENST00000412587 GTF3C6Q969F1 213 aa9.89□□□□□ -0.83
PBRM1-209ENST00000412587 ZBTB9Q96C00 473 aa9.89□□□□□ -0.83
PBRM1-209ENST00000412587 ERO1AQ96HE7 468 aa9.89□□□□□ -0.83
PBRM1-209ENST00000412587 MYD88Q99836 296 aa9.89□□□□□ -0.83
PBRM1-209ENST00000412587 PPIP5K1Q6PFW1 1433 aa9.89□□□□□ -0.83
PBRM1-209ENST00000412587 F6X3S4 739 aa9.89□□□□□ -0.83
PBRM1-209ENST00000412587 ARFGAP3Q9NP61 516 aa9.89□□□□□ -0.83
PBRM1-209ENST00000412587 NKTRP30414 1462 aaKnown RBP9.89□□□□□ -0.83
PBRM1-209ENST00000412587 PDCP20941 246 aa9.89□□□□□ -0.83
PBRM1-209ENST00000412587 HSPA2P54652 639 aa9.89□□□□□ -0.83
PBRM1-209ENST00000412587 KIF1BPQ96EK5 621 aa9.89□□□□□ -0.83
PBRM1-209ENST00000412587 HYPKQ9NX55 129 aa9.89□□□□□ -0.83
PBRM1-209ENST00000412587 MAPKBP1O60336 1514 aa9.89□□□□□ -0.83
PBRM1-209ENST00000412587 TOM1O60784 492 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 ZPR1O75312 459 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 NEBLO76041 1014 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 PUS7Q96PZ0 661 aaKnown RBP9.88□□□□□ -0.83
PBRM1-209ENST00000412587 C19orf44Q9H6X5 657 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 PLEKHH1Q9ULM0 1364 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 PPP2R5AQ15172 486 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 POTEB2H3BUK9 544 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 TNMDQ9H2S6 317 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 CYP46A1Q9Y6A2 500 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 FAM83GA6ND36 823 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 FLIIQ13045 1269 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 TERF2Q15554 542 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 METTL24Q5JXM2 366 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 JAKMIP3Q5VZ66 844 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 TBX22Q9Y458 520 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 ABCA5Q8WWZ7 1642 aa9.88□□□□□ -0.83
PBRM1-209ENST00000412587 CCDC43Q96MW1 224 aaKnown RBP9.87□□□□□ -0.83
PBRM1-209ENST00000412587 CLIP2Q9UDT6 1046 aa9.87□□□□□ -0.83
PBRM1-209ENST00000412587 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-209ENST00000412587 CEP170Q5SW79 1584 aa9.87□□□□□ -0.83
PBRM1-209ENST00000412587 UBAP1LF5GYI3 381 aa9.87□□□□□ -0.83
PBRM1-209ENST00000412587 TUBB4AP04350 444 aa9.87□□□□□ -0.83
PBRM1-209ENST00000412587 KCNA6P17658 529 aa9.87□□□□□ -0.83
PBRM1-209ENST00000412587 LUZP1Q86V48 1076 aa9.87□□□□□ -0.83
PBRM1-209ENST00000412587 SMARCC1Q92922 1105 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-209ENST00000412587 CFAP43Q8NDM7 1665 aa9.87□□□□□ -0.83
PBRM1-209ENST00000412587 DCAF8L1A6NGE4 600 aa9.87□□□□□ -0.83
PBRM1-209ENST00000412587 URI1O94763 535 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-209ENST00000412587 SATB1Q01826 763 aa9.87□□□□□ -0.83
PBRM1-209ENST00000412587 TESK2Q96S53 571 aa9.87□□□□□ -0.83
PBRM1-209ENST00000412587 CEP89Q96ST8 783 aa9.87□□□□□ -0.83
PBRM1-209ENST00000412587 CCDC196A0A1B0GTZ2 297 aa9.87□□□□□ -0.83
PBRM1-209ENST00000412587 TEX13AQ9BXU3 409 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-209ENST00000412587 PBRM1Q86U86 1689 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 KDM4AO75164 1064 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 MAP3K11Q16584 847 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 ATP2B3Q16720 1220 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 NUTM1Q86Y26 1132 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 NUP62CLQ9H1M0 184 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 IL16Q14005 1332 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 RAB11FIP3O75154 756 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 SNW1Q13573 536 aaKnown RBP9.86□□□□□ -0.83
PBRM1-209ENST00000412587 SRRTQ9BXP5 876 aaKnown RBP9.86□□□□□ -0.83
PBRM1-209ENST00000412587 MBIPQ9NS73 344 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 RAI14Q9P0K7 980 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 LRP2BPQ9P2M1 347 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 ATP2B1P20020 1258 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 GAS2L3Q86XJ1 694 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 ANKRD18AQ8IVF6 992 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 TRMT112Q9UI30 125 aaKnown RBP9.86□□□□□ -0.83
PBRM1-209ENST00000412587 FBXO3Q9UK99 471 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 PTPRCP08575 1304 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 A0A087WZG4 1122 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 EBAG9O00559 213 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 IDH1O75874 414 aaKnown RBP9.86□□□□□ -0.83
PBRM1-209ENST00000412587 GLRX3O76003 335 aaKnown RBP9.86□□□□□ -0.83
PBRM1-209ENST00000412587 TRIM27P14373 513 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 CWC27Q6UX04 472 aaKnown RBP9.86□□□□□ -0.83
PBRM1-209ENST00000412587 CRACR2AQ9BSW2 395 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 ZBTB3Q9H5J0 574 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.86□□□□□ -0.83
PBRM1-209ENST00000412587 CTNNA3Q9UI47 895 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 AKAP2Q9Y2D5 859 aa9.86□□□□□ -0.83
PBRM1-209ENST00000412587 NCKAP5LQ9HCH0 1330 aa9.85□□□□□ -0.83
PBRM1-209ENST00000412587 ATP10AO60312 1499 aa9.85□□□□□ -0.83
PBRM1-209ENST00000412587 ANKRD1Q15327 319 aa9.85□□□□□ -0.83
PBRM1-209ENST00000412587 SYCP1Q15431 976 aa9.85□□□□□ -0.83
PBRM1-209ENST00000412587 ZRANB1Q9UGI0 708 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms