RNA–Protein interactions for RNA: ENST00000411042.1

RN7SKP228-201, Transcript of RNA, 7SK small nuclear pseudogene 228, humanhuman

BASIC

Gene RN7SKP228, Length 263 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP228-201ENST00000411042 ANP32AP39687 249 aaKnown RBP13.14□□□□□ -0.31
RN7SKP228-201ENST00000411042 HSP90AB4PQ58FF6 505 aa13.14□□□□□ -0.31
RN7SKP228-201ENST00000411042 BMP2KLQ5H9B9 411 aa13.14□□□□□ -0.31
RN7SKP228-201ENST00000411042 ANKRD45Q5TZF3 282 aa13.14□□□□□ -0.31
RN7SKP228-201ENST00000411042 ANKRD13DQ6ZTN6 518 aa13.14□□□□□ -0.31
RN7SKP228-201ENST00000411042 UNC5CLQ8IV45 518 aa13.14□□□□□ -0.31
RN7SKP228-201ENST00000411042 METTL22Q9BUU2 404 aaPredicted RBP13.14□□□□□ -0.31
RN7SKP228-201ENST00000411042 MAP3K2Q9Y2U5 619 aa13.14□□□□□ -0.31
RN7SKP228-201ENST00000411042 USP16Q9Y5T5 823 aa13.14□□□□□ -0.31
RN7SKP228-201ENST00000411042 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.13□□□□□ -0.31
RN7SKP228-201ENST00000411042 RAB11FIP3O75154 756 aa13.13□□□□□ -0.31
RN7SKP228-201ENST00000411042 VPS72Q15906 364 aa13.13□□□□□ -0.31
RN7SKP228-201ENST00000411042 PLBD2Q8NHP8 589 aa13.13□□□□□ -0.31
RN7SKP228-201ENST00000411042 C1orf115Q9H7X2 142 aa13.13□□□□□ -0.31
RN7SKP228-201ENST00000411042 ITGB4P16144 1822 aa13.13□□□□□ -0.31
RN7SKP228-201ENST00000411042 TOGARAM1Q9Y4F4 1720 aa13.13□□□□□ -0.31
RN7SKP228-201ENST00000411042 DDB1Q16531 1140 aa13.12□□□□□ -0.31
RN7SKP228-201ENST00000411042 PROSER3Q2NL68 480 aa13.12□□□□□ -0.31
RN7SKP228-201ENST00000411042 DCAF8Q5TAQ9 597 aa13.12□□□□□ -0.31
RN7SKP228-201ENST00000411042 RIC3Q7Z5B4 369 aa13.12□□□□□ -0.31
RN7SKP228-201ENST00000411042 OSBPL3Q9H4L5 887 aa13.12□□□□□ -0.31
RN7SKP228-201ENST00000411042 PRAMEF22A3QJZ6 481 aa13.11□□□□□ -0.31
RN7SKP228-201ENST00000411042 GRM8O00222 908 aa13.11□□□□□ -0.31
RN7SKP228-201ENST00000411042 ADAMTS2O95450 1211 aa13.11□□□□□ -0.31
RN7SKP228-201ENST00000411042 STARD3NLO95772 234 aa13.11□□□□□ -0.31
RN7SKP228-201ENST00000411042 COPS6Q7L5N1 327 aa13.11□□□□□ -0.31
RN7SKP228-201ENST00000411042 PIGBQ92521 554 aa13.11□□□□□ -0.31
RN7SKP228-201ENST00000411042 LNPKQ9C0E8 428 aa13.11□□□□□ -0.31
RN7SKP228-201ENST00000411042 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
RN7SKP228-201ENST00000411042 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
RN7SKP228-201ENST00000411042 XAGE3Q8WTP9 111 aa13.1□□□□□ -0.31
RN7SKP228-201ENST00000411042 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
RN7SKP228-201ENST00000411042 C9orf78Q9NZ63 289 aaPredicted RBP13.1□□□□□ -0.31
RN7SKP228-201ENST00000411042 USP35Q9P2H5 1018 aa13.1□□□□□ -0.31
RN7SKP228-201ENST00000411042 NOP58Q9Y2X3 529 aaKnown RBP13.1□□□□□ -0.31
RN7SKP228-201ENST00000411042 LRRFIP2Q9Y608 721 aaKnown RBP13.1□□□□□ -0.31
RN7SKP228-201ENST00000411042 TRIM28Q13263 835 aaKnown RBP13.09□□□□□ -0.31
RN7SKP228-201ENST00000411042 DDRGK1Q96HY6 314 aa13.09□□□□□ -0.31
RN7SKP228-201ENST00000411042 UPF2Q9HAU5 1272 aaKnown RBP13.09□□□□□ -0.31
RN7SKP228-201ENST00000411042 ATG3Q9NT62 314 aa13.09□□□□□ -0.31
RN7SKP228-201ENST00000411042 BCL9LQ86UU0 1499 aa13.09□□□□□ -0.31
RN7SKP228-201ENST00000411042 AOX1Q06278 1338 aa13.09□□□□□ -0.31
RN7SKP228-201ENST00000411042 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.31
RN7SKP228-201ENST00000411042 NEURL1BA8MQ27 555 aa13.08□□□□□ -0.32
RN7SKP228-201ENST00000411042 ANXA1P04083 346 aa13.08□□□□□ -0.32
RN7SKP228-201ENST00000411042 GCKRQ14397 625 aa13.08□□□□□ -0.32
RN7SKP228-201ENST00000411042 SKAP1Q86WV1 359 aa13.08□□□□□ -0.32
RN7SKP228-201ENST00000411042 ERC1Q8IUD2 1116 aa13.08□□□□□ -0.32
RN7SKP228-201ENST00000411042 PLEKHM2Q8IWE5 1019 aa13.08□□□□□ -0.32
RN7SKP228-201ENST00000411042 SMARCC1Q92922 1105 aaPredicted RBP13.08□□□□□ -0.32
RN7SKP228-201ENST00000411042 LRRCC1Q9C099 1032 aa13.08□□□□□ -0.32
RN7SKP228-201ENST00000411042 RGS17Q9UGC6 210 aaPredicted RBP13.08□□□□□ -0.32
RN7SKP228-201ENST00000411042 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
RN7SKP228-201ENST00000411042 IGKV5-2P06315 115 aa13.07□□□□□ -0.32
RN7SKP228-201ENST00000411042 NBPF7P0C2Y1 421 aaPredicted RBP13.07□□□□□ -0.32
RN7SKP228-201ENST00000411042 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
RN7SKP228-201ENST00000411042 NBPF10Q6P3W6 841 aaKnown RBP13.07□□□□□ -0.32
RN7SKP228-201ENST00000411042 PPP1R42Q7Z4L9 355 aa13.07□□□□□ -0.32
RN7SKP228-201ENST00000411042 NBPF15Q8N660 670 aa13.07□□□□□ -0.32
RN7SKP228-201ENST00000411042 NGLY1Q96IV0 654 aa13.07□□□□□ -0.32
RN7SKP228-201ENST00000411042 IPO9Q96P70 1041 aaKnown RBP13.07□□□□□ -0.32
RN7SKP228-201ENST00000411042 STAP2Q9UGK3 403 aa13.07□□□□□ -0.32
RN7SKP228-201ENST00000411042 KAT6BQ8WYB5 2073 aa13.07□□□□□ -0.32
RN7SKP228-201ENST00000411042 PNMA6EA0A0J9YXQ4 647 aa13.06□□□□□ -0.32
RN7SKP228-201ENST00000411042 NUTM2BA6NNL0 878 aaPredicted RBP13.06□□□□□ -0.32
RN7SKP228-201ENST00000411042 NUTM2EB1AL46 878 aaPredicted RBP13.06□□□□□ -0.32
RN7SKP228-201ENST00000411042 MYL6BP14649 208 aa13.06□□□□□ -0.32
RN7SKP228-201ENST00000411042 NUTM2AQ8IVF1 878 aaPredicted RBP13.06□□□□□ -0.32
RN7SKP228-201ENST00000411042 CCDC191Q8NCU4 936 aa13.06□□□□□ -0.32
RN7SKP228-201ENST00000411042 KIF1BPQ96EK5 621 aa13.06□□□□□ -0.32
RN7SKP228-201ENST00000411042 RYDENQ9NUL5 291 aaKnown RBP13.06□□□□□ -0.32
RN7SKP228-201ENST00000411042 ASAP1Q9ULH1 1129 aa13.06□□□□□ -0.32
RN7SKP228-201ENST00000411042 ARFGEF2Q9Y6D5 1785 aa13.06□□□□□ -0.32
RN7SKP228-201ENST00000411042 GTPBP6O43824 516 aaPredicted RBP13.05□□□□□ -0.32
RN7SKP228-201ENST00000411042 PTCD1O75127 700 aaKnown RBP13.05□□□□□ -0.32
RN7SKP228-201ENST00000411042 AIMP1Q12904 312 aaKnown RBP13.05□□□□□ -0.32
RN7SKP228-201ENST00000411042 STK25O00506 426 aa13.04□□□□□ -0.32
RN7SKP228-201ENST00000411042 SRGAP3O43295 1099 aa13.04□□□□□ -0.32
RN7SKP228-201ENST00000411042 ONECUT3O60422 494 aaPredicted RBP13.04□□□□□ -0.32
RN7SKP228-201ENST00000411042 RABL6Q3YEC7 729 aaPredicted RBP13.04□□□□□ -0.32
RN7SKP228-201ENST00000411042 HSP90AB3PQ58FF7 597 aa13.04□□□□□ -0.32
RN7SKP228-201ENST00000411042 TTC22Q5TAA0 569 aa13.04□□□□□ -0.32
RN7SKP228-201ENST00000411042 MARCH10Q8NA82 808 aaPredicted RBP13.04□□□□□ -0.32
RN7SKP228-201ENST00000411042 SALL3Q9BXA9 1300 aa13.04□□□□□ -0.32
RN7SKP228-201ENST00000411042 NUP188Q5SRE5 1749 aa13.04□□□□□ -0.32
RN7SKP228-201ENST00000411042 DOT1LQ8TEK3 1739 aa13.03□□□□□ -0.32
RN7SKP228-201ENST00000411042 ERVV-1B6SEH8 477 aa13.03□□□□□ -0.32
RN7SKP228-201ENST00000411042 H7C1W4 665 aa13.03□□□□□ -0.32
RN7SKP228-201ENST00000411042 CHRM1P11229 460 aaPredicted RBP13.03□□□□□ -0.32
RN7SKP228-201ENST00000411042 CYP19A1P11511 503 aaPredicted RBP13.03□□□□□ -0.32
RN7SKP228-201ENST00000411042 HMGB2P26583 209 aaKnown RBP13.03□□□□□ -0.32
RN7SKP228-201ENST00000411042 IL6STP40189 918 aaPredicted RBP13.03□□□□□ -0.32
RN7SKP228-201ENST00000411042 PRIM1P49642 420 aaKnown RBP13.03□□□□□ -0.32
RN7SKP228-201ENST00000411042 CWF19L2Q2TBE0 894 aaKnown RBP13.03□□□□□ -0.32
RN7SKP228-201ENST00000411042 MYD88Q99836 296 aa13.03□□□□□ -0.32
RN7SKP228-201ENST00000411042 SURF6O75683 361 aaKnown RBP13.02□□□□□ -0.33
RN7SKP228-201ENST00000411042 A1BGP04217 495 aa13.02□□□□□ -0.33
RN7SKP228-201ENST00000411042 PDE1AP54750 535 aa13.02□□□□□ -0.33
RN7SKP228-201ENST00000411042 TCIRG1Q13488 830 aa13.02□□□□□ -0.33
RN7SKP228-201ENST00000411042 IL27Q8NEV9 243 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms