RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 NCKAP5LQ9HCH0 1330 aa10.62□□□□□ -0.71
PBRM1-208ENST00000410007 TESK2Q96S53 571 aa10.62□□□□□ -0.71
PBRM1-208ENST00000410007 SMTNL1A8MU46 457 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 HSPA2P54652 639 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 CCDC96Q2M329 555 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 CATIPQ7Z7H3 387 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 RHPN1Q8TCX5 695 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 C8orf37Q96NL8 207 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 SETDB2Q96T68 719 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 PARD3Q8TEW0 1356 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 SLC39A6Q13433 755 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 RAB34Q9BZG1 259 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 DEF6Q9H4E7 631 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 ARHGEF12Q9NZN5 1544 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 FERMT3Q86UX7 667 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 ANKRD18AQ8IVF6 992 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 ERCC4Q92889 916 aaPredicted RBP10.61□□□□□ -0.71
PBRM1-208ENST00000410007 NLRP3Q96P20 1036 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 ZNF219Q9P2Y4 722 aaPredicted RBP10.61□□□□□ -0.71
PBRM1-208ENST00000410007 GOLGA8AA7E2F4 631 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 GOLGA8BA8MQT2 603 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 GRM8O00222 908 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 PDE4BQ07343 736 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 MTHFSDQ2M296 383 aaKnown RBP10.61□□□□□ -0.71
PBRM1-208ENST00000410007 DCAF5Q96JK2 942 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 SNRKQ9NRH2 765 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 HMG20BQ9P0W2 317 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 MAPKBP1O60336 1514 aa10.61□□□□□ -0.71
PBRM1-208ENST00000410007 ZFYP08048 801 aaPredicted RBP10.6□□□□□ -0.71
PBRM1-208ENST00000410007 HDAC1Q13547 482 aaPredicted RBP10.6□□□□□ -0.71
PBRM1-208ENST00000410007 ZNF622Q969S3 477 aaKnown RBP eCLIP10.6□□□□□ -0.713e-6■■■■□ 24.4
PBRM1-208ENST00000410007 GSTO1P78417 241 aa10.6□□□□□ -0.71
PBRM1-208ENST00000410007 CABLES1Q8TDN4 633 aa10.6□□□□□ -0.71
PBRM1-208ENST00000410007 CUL5Q93034 780 aa10.6□□□□□ -0.71
PBRM1-208ENST00000410007 ACSBG1Q96GR2 724 aa10.6□□□□□ -0.71
PBRM1-208ENST00000410007 ZRANB1Q9UGI0 708 aa10.6□□□□□ -0.71
PBRM1-208ENST00000410007 HLA-DOAP06340 250 aa10.6□□□□□ -0.71
PBRM1-208ENST00000410007 MAP3K11Q16584 847 aa10.6□□□□□ -0.71
PBRM1-208ENST00000410007 IP6K1Q92551 441 aa10.6□□□□□ -0.71
PBRM1-208ENST00000410007 KIF5BP33176 963 aa10.6□□□□□ -0.71
PBRM1-208ENST00000410007 SSRP1Q08945 709 aaKnown RBP10.6□□□□□ -0.71
PBRM1-208ENST00000410007 LINS1Q8NG48 757 aa10.6□□□□□ -0.71
PBRM1-208ENST00000410007 IL15P40933 162 aaPredicted RBP10.59□□□□□ -0.71
PBRM1-208ENST00000410007 KRI1Q8N9T8 703 aaKnown RBP10.59□□□□□ -0.71
PBRM1-208ENST00000410007 MEIS3Q99687 375 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 DISP1Q96F81 1524 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 SOS1Q07889 1333 aaPredicted RBP10.59□□□□□ -0.71
PBRM1-208ENST00000410007 ATP2B3Q16720 1220 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 TTC22Q5TAA0 569 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 SPC24Q8NBT2 197 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 CCDC12Q8WUD4 166 aaPredicted RBP10.59□□□□□ -0.71
PBRM1-208ENST00000410007 MAP3K5Q99683 1374 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 CCDC194A0A1B0GVG4 234 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 ZGPATQ8N5A5 531 aaKnown RBP10.59□□□□□ -0.71
PBRM1-208ENST00000410007 ANKRD44Q8N8A2 993 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 C8orf58Q8NAV2 365 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 CRNKL1Q9BZJ0 848 aaKnown RBP10.59□□□□□ -0.71
PBRM1-208ENST00000410007 EHMT1Q9H9B1 1298 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 CABP5Q9NP86 173 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 KIF21AQ7Z4S6 1674 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 A0A1W2PP64 1363 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 PPP1R12BO60237 982 aaPredicted RBP10.59□□□□□ -0.71
PBRM1-208ENST00000410007 MRPL50Q8N5N7 158 aaKnown RBP10.59□□□□□ -0.71
PBRM1-208ENST00000410007 EYA1Q99502 592 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 NYXQ9GZU5 481 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 UHRF1BP1Q6BDS2 1440 aa10.59□□□□□ -0.71
PBRM1-208ENST00000410007 TMEM266Q2M3C6 531 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 NOM1Q5C9Z4 860 aaKnown RBP10.58□□□□□ -0.72
PBRM1-208ENST00000410007 LMBR1LQ6UX01 489 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 CFAP43Q8NDM7 1665 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 PIK3C2GO75747 1445 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 SETQ01105 290 aaPredicted RBP10.58□□□□□ -0.72
PBRM1-208ENST00000410007 MFSD6Q6ZSS7 791 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 TBC1D9Q6ZT07 1266 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 NFATC2IPQ8NCF5 419 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 NIP7Q9Y221 180 aaKnown RBP eCLIP10.58□□□□□ -0.72
PBRM1-208ENST00000410007 TSPY2A6NKD2 308 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 HOXC9P31274 260 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 NCOA7Q8NI08 942 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 CDCA7Q9BWT1 371 aaPredicted RBP10.58□□□□□ -0.72
PBRM1-208ENST00000410007 PCDH11XQ9BZA7 1347 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 PCDH11YQ9BZA8 1340 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 NLRP5P59047 1200 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 ATP8B2P98198 1209 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 TMEM67Q5HYA8 995 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 PAF1Q8N7H5 531 aa10.58□□□□□ -0.72
PBRM1-208ENST00000410007 UTP14AQ9BVJ6 771 aaKnown RBP10.58□□□□□ -0.72
PBRM1-208ENST00000410007 MAP3K19Q56UN5 1328 aa10.57□□□□□ -0.72
PBRM1-208ENST00000410007 TTLL12Q14166 644 aaPredicted RBP10.57□□□□□ -0.72
PBRM1-208ENST00000410007 CCDC82Q8N4S0 544 aa10.57□□□□□ -0.72
PBRM1-208ENST00000410007 JARID2Q92833 1246 aaPredicted RBP10.57□□□□□ -0.72
PBRM1-208ENST00000410007 NEK1Q96PY6 1258 aa10.57□□□□□ -0.72
PBRM1-208ENST00000410007 ATP7AQ04656 1500 aa10.57□□□□□ -0.72
PBRM1-208ENST00000410007 MYO1BO43795 1136 aa10.57□□□□□ -0.72
PBRM1-208ENST00000410007 IARSP41252 1262 aaKnown RBP10.57□□□□□ -0.72
PBRM1-208ENST00000410007 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
PBRM1-208ENST00000410007 SIRT1Q96EB6 747 aa10.57□□□□□ -0.72
PBRM1-208ENST00000410007 FEZ1Q99689 392 aa10.57□□□□□ -0.72
PBRM1-208ENST00000410007 LMTK3Q96Q04 1460 aa10.57□□□□□ -0.72
PBRM1-208ENST00000410007 NUCB1Q02818 461 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms