RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 ANXA1P04083 346 aa17.6■□□□□ 0.41
LIMS2-206ENST00000409754 SRCIN1Q9C0H9 1055 aa17.6■□□□□ 0.41
LIMS2-206ENST00000409754 SRCAPQ6ZRS2 3230 aa17.59■□□□□ 0.41
LIMS2-206ENST00000409754 ADCY9O60503 1353 aa17.59■□□□□ 0.41
LIMS2-206ENST00000409754 MYH14Q7Z406 1995 aaKnown RBP17.59■□□□□ 0.41
LIMS2-206ENST00000409754 PI4KAP2A4QPH2 592 aa17.59■□□□□ 0.41
LIMS2-206ENST00000409754 HMMRO75330 724 aa17.59■□□□□ 0.41
LIMS2-206ENST00000409754 PDIA6Q15084 440 aa17.59■□□□□ 0.41
LIMS2-206ENST00000409754 PROSER3Q2NL68 480 aa17.59■□□□□ 0.41
LIMS2-206ENST00000409754 ANKRD45Q5TZF3 282 aa17.59■□□□□ 0.41
LIMS2-206ENST00000409754 PI4KAP1Q8N8J0 262 aa17.59■□□□□ 0.41
LIMS2-206ENST00000409754 C4BP0C0L5 1744 aa17.59■□□□□ 0.41
LIMS2-206ENST00000409754 ANP32AP39687 249 aaKnown RBP17.58■□□□□ 0.41
LIMS2-206ENST00000409754 ITPK1Q13572 414 aa17.58■□□□□ 0.41
LIMS2-206ENST00000409754 BEND3Q5T5X7 828 aa17.58■□□□□ 0.41
LIMS2-206ENST00000409754 LNPKQ9C0E8 428 aa17.58■□□□□ 0.41
LIMS2-206ENST00000409754 KSR2Q6VAB6 950 aa17.58■□□□□ 0.4
LIMS2-206ENST00000409754 USP44Q9H0E7 712 aa17.58■□□□□ 0.4
LIMS2-206ENST00000409754 UBR3Q6ZT12 1888 aa17.57■□□□□ 0.4
LIMS2-206ENST00000409754 LOC102724428A0A0B4J2F2 783 aa17.57■□□□□ 0.4
LIMS2-206ENST00000409754 DDX58O95786 925 aaKnown RBP17.57■□□□□ 0.4
LIMS2-206ENST00000409754 SIK1P57059 783 aa17.57■□□□□ 0.4
LIMS2-206ENST00000409754 ZNF827Q17R98 1081 aa17.57■□□□□ 0.4
LIMS2-206ENST00000409754 QSER1Q2KHR3 1735 aa17.56■□□□□ 0.4
LIMS2-206ENST00000409754 CASZ1Q86V15 1759 aa17.56■□□□□ 0.4
LIMS2-206ENST00000409754 ALDH1L1O75891 902 aa17.55■□□□□ 0.4
LIMS2-206ENST00000409754 UBTFL1P0CB47 393 aaPredicted RBP17.55■□□□□ 0.4
LIMS2-206ENST00000409754 AMIGO3Q86WK7 504 aa17.55■□□□□ 0.4
LIMS2-206ENST00000409754 SMARCC1Q92922 1105 aaPredicted RBP17.55■□□□□ 0.4
LIMS2-206ENST00000409754 CCNL1Q9UK58 526 aaPredicted RBP17.55■□□□□ 0.4
LIMS2-206ENST00000409754 LAMB4A4D0S4 1761 aa17.54■□□□□ 0.4
LIMS2-206ENST00000409754 PTCD1O75127 700 aaKnown RBP17.54■□□□□ 0.4
LIMS2-206ENST00000409754 ATP8B2P98198 1209 aa17.54■□□□□ 0.4
LIMS2-206ENST00000409754 LINC00116Q8NCU8 138 aa17.54■□□□□ 0.4
LIMS2-206ENST00000409754 MAP3K2Q9Y2U5 619 aa17.54■□□□□ 0.4
LIMS2-206ENST00000409754 USP16Q9Y5T5 823 aa17.54■□□□□ 0.4
LIMS2-206ENST00000409754 ERBB4Q15303 1308 aa17.54■□□□□ 0.4
LIMS2-206ENST00000409754 SLC27A3Q5K4L6 730 aa17.54■□□□□ 0.4
LIMS2-206ENST00000409754 IBTKQ9P2D0 1353 aaPredicted RBP17.53■□□□□ 0.4
LIMS2-206ENST00000409754 AKT1S1Q96B36 256 aa17.53■□□□□ 0.4
LIMS2-206ENST00000409754 LRRFIP2Q9Y608 721 aaKnown RBP17.53■□□□□ 0.4
LIMS2-206ENST00000409754 LRP10Q7Z4F1 713 aa17.52■□□□□ 0.4
LIMS2-206ENST00000409754 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
LIMS2-206ENST00000409754 RBM42Q9BTD8 480 aaKnown RBP17.51■□□□□ 0.39
LIMS2-206ENST00000409754 PDGFDQ9GZP0 370 aaPredicted RBP17.51■□□□□ 0.39
LIMS2-206ENST00000409754 SMIM5Q71RC9 77 aa17.5■□□□□ 0.39
LIMS2-206ENST00000409754 NPM2Q86SE8 214 aaKnown RBP17.5■□□□□ 0.39
LIMS2-206ENST00000409754 LINS1Q8NG48 757 aa17.5■□□□□ 0.39
LIMS2-206ENST00000409754 XAGE3Q8WTP9 111 aa17.5■□□□□ 0.39
LIMS2-206ENST00000409754 C4AP0C0L4 1744 aa17.5■□□□□ 0.39
LIMS2-206ENST00000409754 MYL6BP14649 208 aa17.5■□□□□ 0.39
LIMS2-206ENST00000409754 ATP6V1AP38606 617 aa17.5■□□□□ 0.39
LIMS2-206ENST00000409754 AIMP1Q12904 312 aaKnown RBP17.5■□□□□ 0.39
LIMS2-206ENST00000409754 BMP2KLQ5H9B9 411 aa17.5■□□□□ 0.39
LIMS2-206ENST00000409754 DNAJC10Q8IXB1 793 aa17.5■□□□□ 0.39
LIMS2-206ENST00000409754 IPO9Q96P70 1041 aaKnown RBP17.5■□□□□ 0.39
LIMS2-206ENST00000409754 HDAC5Q9UQL6 1122 aa17.5■□□□□ 0.39
LIMS2-206ENST00000409754 COPS6Q7L5N1 327 aa17.49■□□□□ 0.39
LIMS2-206ENST00000409754 RIC3Q7Z5B4 369 aa17.49■□□□□ 0.39
LIMS2-206ENST00000409754 PNMA6EA0A0J9YXQ4 647 aa17.48■□□□□ 0.39
LIMS2-206ENST00000409754 PSDA5PKW4 1024 aaPredicted RBP17.48■□□□□ 0.39
LIMS2-206ENST00000409754 NBPF7P0C2Y1 421 aaPredicted RBP17.48■□□□□ 0.39
LIMS2-206ENST00000409754 SSH3Q8TE77 659 aa17.48■□□□□ 0.39
LIMS2-206ENST00000409754 R3HDM1Q15032 1099 aaKnown RBP17.47■□□□□ 0.39
LIMS2-206ENST00000409754 METTL22Q9BUU2 404 aaPredicted RBP17.47■□□□□ 0.39
LIMS2-206ENST00000409754 UTYO14607 1347 aa17.47■□□□□ 0.39
LIMS2-206ENST00000409754 MSH5O43196 834 aa17.47■□□□□ 0.39
LIMS2-206ENST00000409754 NEXNQ0ZGT2 675 aa17.47■□□□□ 0.39
LIMS2-206ENST00000409754 POLA2Q14181 598 aa17.47■□□□□ 0.39
LIMS2-206ENST00000409754 SLC15A2Q16348 729 aa17.47■□□□□ 0.39
LIMS2-206ENST00000409754 ANKRD13DQ6ZTN6 518 aa17.47■□□□□ 0.39
LIMS2-206ENST00000409754 PLEKHM2Q8IWE5 1019 aa17.47■□□□□ 0.39
LIMS2-206ENST00000409754 C9orf78Q9NZ63 289 aaPredicted RBP17.47■□□□□ 0.39
LIMS2-206ENST00000409754 CYP19A1P11511 503 aaPredicted RBP17.46■□□□□ 0.39
LIMS2-206ENST00000409754 VSIG10Q8N0Z9 540 aa17.46■□□□□ 0.39
LIMS2-206ENST00000409754 PNPLA7Q6ZV29 1317 aa17.46■□□□□ 0.38
LIMS2-206ENST00000409754 COL24A1Q17RW2 1714 aa17.45■□□□□ 0.38
LIMS2-206ENST00000409754 NBPF26B4DH59 902 aa17.45■□□□□ 0.38
LIMS2-206ENST00000409754 SEC24BO95487 1268 aa17.45■□□□□ 0.38
LIMS2-206ENST00000409754 IGKV5-2P06315 115 aa17.45■□□□□ 0.38
LIMS2-206ENST00000409754 MTX1Q13505 466 aa17.45■□□□□ 0.38
LIMS2-206ENST00000409754 CWF19L2Q2TBE0 894 aaKnown RBP17.45■□□□□ 0.38
LIMS2-206ENST00000409754 NBPF14Q5TI25 921 aa17.45■□□□□ 0.38
LIMS2-206ENST00000409754 NBPF10Q6P3W6 841 aaKnown RBP17.45■□□□□ 0.38
LIMS2-206ENST00000409754 INTS5Q6P9B9 1019 aaKnown RBP17.45■□□□□ 0.38
LIMS2-206ENST00000409754 PPP1R42Q7Z4L9 355 aa17.45■□□□□ 0.38
LIMS2-206ENST00000409754 NBPF15Q8N660 670 aa17.45■□□□□ 0.38
LIMS2-206ENST00000409754 TEX13AQ9BXU3 409 aaPredicted RBP17.45■□□□□ 0.38
LIMS2-206ENST00000409754 CNTNAP4Q9C0A0 1308 aa17.45■□□□□ 0.38
LIMS2-206ENST00000409754 GRM8O00222 908 aa17.44■□□□□ 0.38
LIMS2-206ENST00000409754 EXOC6BQ9Y2D4 811 aa17.44■□□□□ 0.38
LIMS2-206ENST00000409754 NEURL1BA8MQ27 555 aa17.43■□□□□ 0.38
LIMS2-206ENST00000409754 SMARCA5O60264 1052 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-206ENST00000409754 CRKLP46109 303 aaKnown RBP17.43■□□□□ 0.38
LIMS2-206ENST00000409754 PIP4K2AP48426 406 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-206ENST00000409754 PLBD2Q8NHP8 589 aa17.43■□□□□ 0.38
LIMS2-206ENST00000409754 DDRGK1Q96HY6 314 aa17.43■□□□□ 0.38
LIMS2-206ENST00000409754 LRRCC1Q9C099 1032 aa17.43■□□□□ 0.38
LIMS2-206ENST00000409754 UPF2Q9HAU5 1272 aaKnown RBP17.43■□□□□ 0.38
LIMS2-206ENST00000409754 APBB1O00213 710 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms