RNA–Protein interactions for RNA: ENST00000409583.5

ITGB6-202, Transcript of integrin subunit beta 6, humanhuman

TSL 3

Gene ITGB6, Length 4,500 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-202ENST00000409583 AK7Q96M32 723 aa10.76□□□□□ -0.69
ITGB6-202ENST00000409583 PA2G4Q9UQ80 394 aaKnown RBP10.76□□□□□ -0.69
ITGB6-202ENST00000409583 G2E3Q7L622 706 aa10.76□□□□□ -0.69
ITGB6-202ENST00000409583 SLAIN2Q9P270 581 aa10.76□□□□□ -0.69
ITGB6-202ENST00000409583 IQSEC3Q9UPP2 1182 aaPredicted RBP10.76□□□□□ -0.69
ITGB6-202ENST00000409583 GOLIM4O00461 696 aa10.76□□□□□ -0.69
ITGB6-202ENST00000409583 SLC3A2P08195 630 aaKnown RBP10.76□□□□□ -0.69
ITGB6-202ENST00000409583 NBPF6Q5VWK0 638 aa10.76□□□□□ -0.69
ITGB6-202ENST00000409583 LMBR1LQ6UX01 489 aa10.76□□□□□ -0.69
ITGB6-202ENST00000409583 NBPF4Q96M43 638 aa10.76□□□□□ -0.69
ITGB6-202ENST00000409583 PDRG1Q9NUG6 133 aa10.76□□□□□ -0.69
ITGB6-202ENST00000409583 AKAP2Q9Y2D5 859 aa10.76□□□□□ -0.69
ITGB6-202ENST00000409583 PDCP20941 246 aa10.75□□□□□ -0.69
ITGB6-202ENST00000409583 ZSCAN25Q6NSZ9 544 aa10.75□□□□□ -0.69
ITGB6-202ENST00000409583 LEKR1Q6ZMV7 388 aa10.75□□□□□ -0.69
ITGB6-202ENST00000409583 FERMT3Q86UX7 667 aa10.75□□□□□ -0.69
ITGB6-202ENST00000409583 C16orf71Q8IYS4 520 aaPredicted RBP10.75□□□□□ -0.69
ITGB6-202ENST00000409583 CERS3Q8IU89 383 aa10.75□□□□□ -0.69
ITGB6-202ENST00000409583 TEX13AQ9BXU3 409 aaPredicted RBP10.75□□□□□ -0.69
ITGB6-202ENST00000409583 ECHDC1Q9NTX5 307 aa10.75□□□□□ -0.69
ITGB6-202ENST00000409583 XBP1P17861 261 aa10.75□□□□□ -0.69
ITGB6-202ENST00000409583 LARP1BQ659C4 914 aaKnown RBP10.75□□□□□ -0.69
ITGB6-202ENST00000409583 ARHGEF5Q12774 1597 aa10.75□□□□□ -0.69
ITGB6-202ENST00000409583 IGSF3O75054 1194 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 TERF1P54274 439 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 CCDC82Q8N4S0 544 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 RHPN1Q8TCX5 695 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 SECISBP2LQ93073 1101 aaKnown RBP10.74□□□□□ -0.69
ITGB6-202ENST00000409583 C6orf229H3BNL8 230 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 PPFIA3O75145 1194 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 CAVIN4Q5BKX8 364 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 EDC4Q6P2E9 1401 aaKnown RBP10.74□□□□□ -0.69
ITGB6-202ENST00000409583 MAP3K5Q99683 1374 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 GRM8O00222 908 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 RFC4P35249 363 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 KSR2Q6VAB6 950 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 TBC1D9Q6ZT07 1266 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 DDX46Q7L014 1031 aaKnown RBP10.74□□□□□ -0.69
ITGB6-202ENST00000409583 GIMAP7Q8NHV1 300 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 ARHGAP45Q92619 1136 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 SIRT1Q96EB6 747 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 UBAC1Q9BSL1 405 aa10.74□□□□□ -0.69
ITGB6-202ENST00000409583 RNMTO43148 476 aaKnown RBP10.73□□□□□ -0.69
ITGB6-202ENST00000409583 ZCCHC11Q5TAX3 1644 aaKnown RBP10.73□□□□□ -0.69
ITGB6-202ENST00000409583 DCAF5Q96JK2 942 aa10.73□□□□□ -0.69
ITGB6-202ENST00000409583 BRMS1Q9HCU9 246 aa10.73□□□□□ -0.69
ITGB6-202ENST00000409583 TRIM35Q9UPQ4 493 aa10.73□□□□□ -0.69
ITGB6-202ENST00000409583 PLEKHG3A1L390 1219 aa10.73□□□□□ -0.69
ITGB6-202ENST00000409583 CCDC69A6NI79 296 aa10.73□□□□□ -0.69
ITGB6-202ENST00000409583 CTNNA3Q9UI47 895 aa10.73□□□□□ -0.69
ITGB6-202ENST00000409583 STK38Q15208 465 aa10.72□□□□□ -0.69
ITGB6-202ENST00000409583 NBPF5PQ86XG9 351 aaPredicted RBP10.72□□□□□ -0.69
ITGB6-202ENST00000409583 CCDC83Q8IWF9 413 aa10.72□□□□□ -0.69
ITGB6-202ENST00000409583 RPGRQ92834 1020 aaKnown RBP10.72□□□□□ -0.69
ITGB6-202ENST00000409583 SLC4A8Q2Y0W8 1093 aa10.72□□□□□ -0.69
ITGB6-202ENST00000409583 ZFYVE9O95405 1425 aa10.72□□□□□ -0.69
ITGB6-202ENST00000409583 HAND2P61296 217 aa10.72□□□□□ -0.69
ITGB6-202ENST00000409583 IMMTQ16891 758 aaKnown RBP10.72□□□□□ -0.69
ITGB6-202ENST00000409583 PCMTD1Q96MG8 357 aaPredicted RBP10.72□□□□□ -0.69
ITGB6-202ENST00000409583 NIP7Q9Y221 180 aaKnown RBP eCLIP10.72□□□□□ -0.69
ITGB6-202ENST00000409583 TRIM22Q8IYM9 498 aa10.72□□□□□ -0.69
ITGB6-202ENST00000409583 ANKRD44Q8N8A2 993 aa10.72□□□□□ -0.69
ITGB6-202ENST00000409583 CCDC43Q96MW1 224 aaKnown RBP10.72□□□□□ -0.69
ITGB6-202ENST00000409583 NAPBQ9H115 298 aa10.72□□□□□ -0.69
ITGB6-202ENST00000409583 MCM5P33992 734 aa10.71□□□□□ -0.69
ITGB6-202ENST00000409583 ANKRD1Q15327 319 aa10.71□□□□□ -0.69
ITGB6-202ENST00000409583 HELBQ8NG08 1087 aaPredicted RBP10.71□□□□□ -0.69
ITGB6-202ENST00000409583 PRIMPOLQ96LW4 560 aa10.71□□□□□ -0.69
ITGB6-202ENST00000409583 CWC22Q9HCG8 908 aaKnown RBP10.71□□□□□ -0.69
ITGB6-202ENST00000409583 GCC2Q8IWJ2 1684 aa10.71□□□□□ -0.69
ITGB6-202ENST00000409583 H0YHG0 523 aa10.71□□□□□ -0.69
ITGB6-202ENST00000409583 SLC5A1P13866 664 aa10.71□□□□□ -0.69
ITGB6-202ENST00000409583 DZIP1Q86YF9 867 aaKnown RBP10.71□□□□□ -0.69
ITGB6-202ENST00000409583 LINS1Q8NG48 757 aa10.71□□□□□ -0.69
ITGB6-202ENST00000409583 SBNO1A3KN83 1393 aa10.71□□□□□ -0.69
ITGB6-202ENST00000409583 TPM3P06753 285 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 MAP3K12Q12852 859 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 ZNF790Q6PG37 636 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 MLH3Q9UHC1 1453 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 SDSP20132 328 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 USP5P45974 858 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 ME1P48163 572 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 BMP2KLQ5H9B9 411 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 DZIP3Q86Y13 1208 aaKnown RBP10.7□□□□□ -0.7
ITGB6-202ENST00000409583 MPNDQ8N594 471 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 TCEANC2Q96MN5 208 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 RBM28Q9NW13 759 aaKnown RBP10.7□□□□□ -0.7
ITGB6-202ENST00000409583 KINO60870 393 aaKnown RBP10.7□□□□□ -0.7
ITGB6-202ENST00000409583 A1BGP04217 495 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
ITGB6-202ENST00000409583 ADGBQ8N7X0 1667 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 SPATA31E1Q6ZUB1 1445 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 KRT32Q14532 448 aa10.7□□□□□ -0.7
ITGB6-202ENST00000409583 CCDC47Q96A33 483 aaKnown RBP10.7□□□□□ -0.7
ITGB6-202ENST00000409583 MYCBPQ99417 103 aaPredicted RBP10.7□□□□□ -0.7
ITGB6-202ENST00000409583 CDC5LQ99459 802 aaKnown RBP10.7□□□□□ -0.7
ITGB6-202ENST00000409583 GTF2F1P35269 517 aaKnown RBP eCLIP10.69□□□□□ -0.7
ITGB6-202ENST00000409583 HDAC1Q13547 482 aaPredicted RBP10.69□□□□□ -0.7
ITGB6-202ENST00000409583 RAB11FIP4Q86YS3 637 aa10.69□□□□□ -0.7
ITGB6-202ENST00000409583 GUCY1B3Q02153 619 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms