RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 TMED8Q6PL24 325 aaPredicted RBP12.25□□□□□ -0.45
CUL1-202ENST00000409469 KAZALD1Q96I82 304 aa12.25□□□□□ -0.45
CUL1-202ENST00000409469 ZFP91Q96JP5 570 aaPredicted RBP12.25□□□□□ -0.45
CUL1-202ENST00000409469 CARD10Q9BWT7 1032 aa12.25□□□□□ -0.45
CUL1-202ENST00000409469 CCDC9Q9Y3X0 531 aaKnown RBP12.25□□□□□ -0.45
CUL1-202ENST00000409469 A1BGP04217 495 aa12.24□□□□□ -0.45
CUL1-202ENST00000409469 BECN1Q14457 450 aa12.24□□□□□ -0.45
CUL1-202ENST00000409469 SIL1Q9H173 461 aa12.24□□□□□ -0.45
CUL1-202ENST00000409469 BICC1Q9H694 974 aaKnown RBP12.24□□□□□ -0.45
CUL1-202ENST00000409469 FOXD4L1Q9NU39 408 aa12.24□□□□□ -0.45
CUL1-202ENST00000409469 A0A0G2JS52 829 aa12.24□□□□□ -0.45
CUL1-202ENST00000409469 TRIM6-TRIM34B2RNG4 842 aa12.24□□□□□ -0.45
CUL1-202ENST00000409469 OS9Q13438 667 aaPredicted RBP12.24□□□□□ -0.45
CUL1-202ENST00000409469 NFKBIBQ15653 356 aa12.24□□□□□ -0.45
CUL1-202ENST00000409469 LRP10Q7Z4F1 713 aa12.24□□□□□ -0.45
CUL1-202ENST00000409469 ZMYND15Q9H091 742 aa12.24□□□□□ -0.45
CUL1-202ENST00000409469 NBPF26B4DH59 902 aa12.24□□□□□ -0.45
CUL1-202ENST00000409469 FRAT2O75474 233 aaPredicted RBP12.24□□□□□ -0.45
CUL1-202ENST00000409469 NBPF14Q5TI25 921 aa12.24□□□□□ -0.45
CUL1-202ENST00000409469 NBPF10Q6P3W6 841 aaKnown RBP12.24□□□□□ -0.45
CUL1-202ENST00000409469 NBPF15Q8N660 670 aa12.24□□□□□ -0.45
CUL1-202ENST00000409469 SALL3Q9BXA9 1300 aa12.23□□□□□ -0.45
CUL1-202ENST00000409469 GRM8O00222 908 aa12.23□□□□□ -0.45
CUL1-202ENST00000409469 POLA2Q14181 598 aa12.23□□□□□ -0.45
CUL1-202ENST00000409469 EPHA10Q5JZY3 1008 aa12.23□□□□□ -0.45
CUL1-202ENST00000409469 RHPN1Q8TCX5 695 aa12.23□□□□□ -0.45
CUL1-202ENST00000409469 NHSL1Q5SYE7 1610 aa12.23□□□□□ -0.45
CUL1-202ENST00000409469 N4BP2Q86UW6 1770 aaPredicted RBP12.23□□□□□ -0.45
CUL1-202ENST00000409469 ROBO1Q9Y6N7 1651 aa12.23□□□□□ -0.45
CUL1-202ENST00000409469 NUTM2BA6NNL0 878 aaPredicted RBP12.23□□□□□ -0.45
CUL1-202ENST00000409469 NUTM2EB1AL46 878 aaPredicted RBP12.23□□□□□ -0.45
CUL1-202ENST00000409469 DDX58O95786 925 aaKnown RBP12.23□□□□□ -0.45
CUL1-202ENST00000409469 HSP90AB1P08238 724 aaKnown RBP12.23□□□□□ -0.45
CUL1-202ENST00000409469 RBM25P49756 843 aaKnown RBP12.23□□□□□ -0.45
CUL1-202ENST00000409469 TTLL7Q6ZT98 887 aa12.23□□□□□ -0.45
CUL1-202ENST00000409469 NUTM2AQ8IVF1 878 aaPredicted RBP12.23□□□□□ -0.45
CUL1-202ENST00000409469 LINS1Q8NG48 757 aa12.23□□□□□ -0.45
CUL1-202ENST00000409469 ANKRD13DQ6ZTN6 518 aa12.22□□□□□ -0.45
CUL1-202ENST00000409469 SYTL4Q96C24 671 aaPredicted RBP12.22□□□□□ -0.45
CUL1-202ENST00000409469 ASAP1Q9ULH1 1129 aa12.22□□□□□ -0.45
CUL1-202ENST00000409469 MRC1P22897 1456 aa12.22□□□□□ -0.45
CUL1-202ENST00000409469 NEURL1BA8MQ27 555 aa12.22□□□□□ -0.45
CUL1-202ENST00000409469 IL25Q9H293 177 aa12.22□□□□□ -0.45
CUL1-202ENST00000409469 ZBTB3Q9H5J0 574 aa12.22□□□□□ -0.45
CUL1-202ENST00000409469 ABCC6O95255 1503 aa12.21□□□□□ -0.45
CUL1-202ENST00000409469 UBE3BQ7Z3V4 1068 aa12.21□□□□□ -0.45
CUL1-202ENST00000409469 GLI3P10071 1580 aa12.21□□□□□ -0.46
CUL1-202ENST00000409469 ALDH1L1O75891 902 aa12.2□□□□□ -0.46
CUL1-202ENST00000409469 BCCIPQ9P287 314 aaKnown RBP eCLIP12.2□□□□□ -0.46
CUL1-202ENST00000409469 PARP4Q9UKK3 1724 aaKnown RBP12.2□□□□□ -0.46
CUL1-202ENST00000409469 GCKRQ14397 625 aa12.2□□□□□ -0.46
CUL1-202ENST00000409469 VSIG10Q8N0Z9 540 aa12.2□□□□□ -0.46
CUL1-202ENST00000409469 SHANK3Q9BYB0 1731 aa12.2□□□□□ -0.46
CUL1-202ENST00000409469 NEXNQ0ZGT2 675 aa12.2□□□□□ -0.46
CUL1-202ENST00000409469 METTL22Q9BUU2 404 aaPredicted RBP12.2□□□□□ -0.46
CUL1-202ENST00000409469 HSCBQ8IWL3 235 aa12.19□□□□□ -0.46
CUL1-202ENST00000409469 PIGBQ92521 554 aa12.19□□□□□ -0.46
CUL1-202ENST00000409469 ZNF592Q92610 1267 aa12.19□□□□□ -0.46
CUL1-202ENST00000409469 OSBPL3Q9H4L5 887 aa12.19□□□□□ -0.46
CUL1-202ENST00000409469 ANTXR1Q9H6X2 564 aa12.19□□□□□ -0.46
CUL1-202ENST00000409469 TMOD3Q9NYL9 352 aa12.19□□□□□ -0.46
CUL1-202ENST00000409469 USP26Q9BXU7 913 aa12.19□□□□□ -0.46
CUL1-202ENST00000409469 KIF1BPQ96EK5 621 aa12.18□□□□□ -0.46
CUL1-202ENST00000409469 TLR7Q9NYK1 1049 aaKnown RBP12.18□□□□□ -0.46
CUL1-202ENST00000409469 ERVV-2B6SEH9 535 aa12.18□□□□□ -0.46
CUL1-202ENST00000409469 PI4K2BQ8TCG2 481 aa12.18□□□□□ -0.46
CUL1-202ENST00000409469 TOGARAM1Q9Y4F4 1720 aa12.18□□□□□ -0.46
CUL1-202ENST00000409469 A0A087WZG4 1122 aa12.17□□□□□ -0.46
CUL1-202ENST00000409469 DNAJC10Q8IXB1 793 aa12.17□□□□□ -0.46
CUL1-202ENST00000409469 CCDC8Q9H0W5 538 aaPredicted RBP12.17□□□□□ -0.46
CUL1-202ENST00000409469 SASH1O94885 1247 aa12.17□□□□□ -0.46
CUL1-202ENST00000409469 NKX1-1Q15270 411 aaPredicted RBP12.17□□□□□ -0.46
CUL1-202ENST00000409469 CHMP3Q9Y3E7 222 aa12.17□□□□□ -0.46
CUL1-202ENST00000409469 KCPQ6ZWJ8 1503 aa12.17□□□□□ -0.46
CUL1-202ENST00000409469 CASC1Q6TDU7 716 aa12.16□□□□□ -0.46
CUL1-202ENST00000409469 MTX1Q13505 466 aa12.16□□□□□ -0.46
CUL1-202ENST00000409469 AACSQ86V21 672 aa12.16□□□□□ -0.46
CUL1-202ENST00000409469 ANO2Q9NQ90 1003 aa12.16□□□□□ -0.46
CUL1-202ENST00000409469 RAB11FIP3O75154 756 aa12.16□□□□□ -0.46
CUL1-202ENST00000409469 CHMLP26374 656 aa12.16□□□□□ -0.46
CUL1-202ENST00000409469 ACSBG1Q96GR2 724 aa12.16□□□□□ -0.46
CUL1-202ENST00000409469 CCDC85AQ96PX6 553 aaPredicted RBP12.16□□□□□ -0.46
CUL1-202ENST00000409469 NDUFB9Q9Y6M9 179 aa12.16□□□□□ -0.46
CUL1-202ENST00000409469 ERC2O15083 957 aa12.15□□□□□ -0.46
CUL1-202ENST00000409469 ATG3Q9NT62 314 aa12.15□□□□□ -0.46
CUL1-202ENST00000409469 STAP2Q9UGK3 403 aa12.15□□□□□ -0.46
CUL1-202ENST00000409469 PALD1Q9ULE6 856 aa12.15□□□□□ -0.46
CUL1-202ENST00000409469 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.46
CUL1-202ENST00000409469 EAF2Q96CJ1 260 aaPredicted RBP12.15□□□□□ -0.46
CUL1-202ENST00000409469 ESYT1Q9BSJ8 1104 aa12.15□□□□□ -0.46
CUL1-202ENST00000409469 UTYO14607 1347 aa12.15□□□□□ -0.47
CUL1-202ENST00000409469 NOL8Q76FK4 1167 aaKnown RBP12.14□□□□□ -0.47
CUL1-202ENST00000409469 CLASRPQ8N2M8 674 aaKnown RBP12.14□□□□□ -0.47
CUL1-202ENST00000409469 PLBD2Q8NHP8 589 aa12.14□□□□□ -0.47
CUL1-202ENST00000409469 SLC4A9Q96Q91 983 aa12.14□□□□□ -0.47
CUL1-202ENST00000409469 EP400Q96L91 3159 aa12.14□□□□□ -0.47
CUL1-202ENST00000409469 ARFGEF2Q9Y6D5 1785 aa12.14□□□□□ -0.47
CUL1-202ENST00000409469 HSP90AA1P07900 732 aaKnown RBP12.13□□□□□ -0.47
CUL1-202ENST00000409469 IFIT2P09913 472 aaKnown RBP12.13□□□□□ -0.47
CUL1-202ENST00000409469 G3BP1Q13283 466 aaKnown RBP eCLIP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms