RNA–Protein interactions for RNA: ENST00000407817.3

TCN2-203, Transcript of transcobalamin 2, humanhuman

TSL 1 (best) BASIC

Gene TCN2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-203ENST00000407817 HDAC5Q9UQL6 1122 aa14.93□□□□□ -0.02
TCN2-203ENST00000407817 NBPF7P0C2Y1 421 aaPredicted RBP14.92□□□□□ -0.02
TCN2-203ENST00000407817 ANKRD13DQ6ZTN6 518 aa14.92□□□□□ -0.02
TCN2-203ENST00000407817 PTF1AQ7RTS3 328 aa14.92□□□□□ -0.02
TCN2-203ENST00000407817 SYTL4Q96C24 671 aaPredicted RBP14.92□□□□□ -0.02
TCN2-203ENST00000407817 SLC4A9Q96Q91 983 aa14.92□□□□□ -0.02
TCN2-203ENST00000407817 COL5A3P25940 1745 aaPredicted RBP14.92□□□□□ -0.02
TCN2-203ENST00000407817 APBB1O00213 710 aa14.91□□□□□ -0.02
TCN2-203ENST00000407817 LY75O60449 1722 aa14.91□□□□□ -0.02
TCN2-203ENST00000407817 CWF19L2Q2TBE0 894 aaKnown RBP14.91□□□□□ -0.02
TCN2-203ENST00000407817 BCL11AQ9H165 835 aa14.91□□□□□ -0.02
TCN2-203ENST00000407817 ARFGEF2Q9Y6D5 1785 aa14.91□□□□□ -0.02
TCN2-203ENST00000407817 PNMA6EA0A0J9YXQ4 647 aa14.91□□□□□ -0.02
TCN2-203ENST00000407817 LRP10Q7Z4F1 713 aa14.91□□□□□ -0.02
TCN2-203ENST00000407817 IPO9Q96P70 1041 aaKnown RBP14.91□□□□□ -0.02
TCN2-203ENST00000407817 MYH14Q7Z406 1995 aaKnown RBP14.9□□□□□ -0.02
TCN2-203ENST00000407817 RREB1Q92766 1687 aa14.9□□□□□ -0.02
TCN2-203ENST00000407817 POTEAQ6S8J7 498 aa14.9□□□□□ -0.02
TCN2-203ENST00000407817 VSIG10Q8N0Z9 540 aa14.9□□□□□ -0.02
TCN2-203ENST00000407817 RBM42Q9BTD8 480 aaKnown RBP14.9□□□□□ -0.02
TCN2-203ENST00000407817 TEX13AQ9BXU3 409 aaPredicted RBP14.9□□□□□ -0.02
TCN2-203ENST00000407817 AFDNP55196 1824 aaKnown RBP14.9□□□□□ -0.02
TCN2-203ENST00000407817 MYD88Q99836 296 aa14.89□□□□□ -0.03
TCN2-203ENST00000407817 METTL22Q9BUU2 404 aaPredicted RBP14.89□□□□□ -0.03
TCN2-203ENST00000407817 NBPF26B4DH59 902 aa14.89□□□□□ -0.03
TCN2-203ENST00000407817 GRM8O00222 908 aa14.89□□□□□ -0.03
TCN2-203ENST00000407817 A1BGP04217 495 aa14.89□□□□□ -0.03
TCN2-203ENST00000407817 NBPF14Q5TI25 921 aa14.89□□□□□ -0.03
TCN2-203ENST00000407817 NBPF10Q6P3W6 841 aaKnown RBP14.89□□□□□ -0.03
TCN2-203ENST00000407817 NBPF15Q8N660 670 aa14.89□□□□□ -0.03
TCN2-203ENST00000407817 PLBD2Q8NHP8 589 aa14.89□□□□□ -0.03
TCN2-203ENST00000407817 EXOC6BQ9Y2D4 811 aa14.89□□□□□ -0.03
TCN2-203ENST00000407817 TAF1LQ8IZX4 1826 aa14.88□□□□□ -0.03
TCN2-203ENST00000407817 SRGAP3O43295 1099 aa14.88□□□□□ -0.03
TCN2-203ENST00000407817 PPP1R42Q7Z4L9 355 aa14.88□□□□□ -0.03
TCN2-203ENST00000407817 SSH3Q8TE77 659 aa14.88□□□□□ -0.03
TCN2-203ENST00000407817 NUP188Q5SRE5 1749 aa14.88□□□□□ -0.03
TCN2-203ENST00000407817 NEURL1BA8MQ27 555 aa14.87□□□□□ -0.03
TCN2-203ENST00000407817 SMARCA5O60264 1052 aaPredicted RBP14.87□□□□□ -0.03
TCN2-203ENST00000407817 STARD3NLO95772 234 aa14.87□□□□□ -0.03
TCN2-203ENST00000407817 IGKV5-2P06315 115 aa14.87□□□□□ -0.03
TCN2-203ENST00000407817 BMP2KLQ5H9B9 411 aa14.87□□□□□ -0.03
TCN2-203ENST00000407817 KRT27Q7Z3Y8 459 aa14.87□□□□□ -0.03
TCN2-203ENST00000407817 DNAJC10Q8IXB1 793 aa14.86□□□□□ -0.03
TCN2-203ENST00000407817 LRRCC1Q9C099 1032 aa14.86□□□□□ -0.03
TCN2-203ENST00000407817 UPF2Q9HAU5 1272 aaKnown RBP14.86□□□□□ -0.03
TCN2-203ENST00000407817 PALLDQ8WX93 1383 aa14.86□□□□□ -0.03
TCN2-203ENST00000407817 IBTKQ9P2D0 1353 aaPredicted RBP14.86□□□□□ -0.03
TCN2-203ENST00000407817 RXRBP28702 533 aa14.86□□□□□ -0.03
TCN2-203ENST00000407817 GCKRQ14397 625 aa14.86□□□□□ -0.03
TCN2-203ENST00000407817 PLEKHM2Q8IWE5 1019 aa14.86□□□□□ -0.03
TCN2-203ENST00000407817 UTYO14607 1347 aa14.85□□□□□ -0.03
TCN2-203ENST00000407817 POLA2Q14181 598 aa14.85□□□□□ -0.03
TCN2-203ENST00000407817 NOP58Q9Y2X3 529 aaKnown RBP14.85□□□□□ -0.03
TCN2-203ENST00000407817 SURF6O75683 361 aaKnown RBP14.84□□□□□ -0.03
TCN2-203ENST00000407817 C16orf71Q8IYS4 520 aaPredicted RBP14.84□□□□□ -0.03
TCN2-203ENST00000407817 ZNF330Q9Y3S2 320 aaPredicted RBP14.84□□□□□ -0.03
TCN2-203ENST00000407817 MTX1Q13505 466 aa14.84□□□□□ -0.03
TCN2-203ENST00000407817 TTLL7Q6ZT98 887 aa14.84□□□□□ -0.03
TCN2-203ENST00000407817 TNS1Q9HBL0 1735 aaKnown RBP14.83□□□□□ -0.04
TCN2-203ENST00000407817 LOC102724428A0A0B4J2F2 783 aa14.83□□□□□ -0.04
TCN2-203ENST00000407817 ATP5J2-PTCD1G3V325 749 aa14.83□□□□□ -0.04
TCN2-203ENST00000407817 RAB11FIP3O75154 756 aa14.83□□□□□ -0.04
TCN2-203ENST00000407817 SEC24BO95487 1268 aa14.83□□□□□ -0.04
TCN2-203ENST00000407817 CYP19A1P11511 503 aaPredicted RBP14.83□□□□□ -0.04
TCN2-203ENST00000407817 SIK1P57059 783 aa14.83□□□□□ -0.04
TCN2-203ENST00000407817 ITPK1Q13572 414 aa14.83□□□□□ -0.04
TCN2-203ENST00000407817 HSP90AB4PQ58FF6 505 aa14.83□□□□□ -0.04
TCN2-203ENST00000407817 ERICH6Q7L0X2 663 aa14.83□□□□□ -0.04
TCN2-203ENST00000407817 SMARCC1Q92922 1105 aaPredicted RBP14.83□□□□□ -0.04
TCN2-203ENST00000407817 SUCLG2Q96I99 432 aa14.83□□□□□ -0.04
TCN2-203ENST00000407817 FAM196AQ6ZSG2 479 aa14.82□□□□□ -0.04
TCN2-203ENST00000407817 ZBTB3Q9H5J0 574 aa14.82□□□□□ -0.04
TCN2-203ENST00000407817 TTC22Q5TAA0 569 aa14.82□□□□□ -0.04
TCN2-203ENST00000407817 ILDR1Q86SU0 546 aaPredicted RBP14.82□□□□□ -0.04
TCN2-203ENST00000407817 OTUD7AQ8TE49 926 aaPredicted RBP14.82□□□□□ -0.04
TCN2-203ENST00000407817 BICC1Q9H694 974 aaKnown RBP14.82□□□□□ -0.04
TCN2-203ENST00000407817 OS9Q13438 667 aaPredicted RBP14.81□□□□□ -0.04
TCN2-203ENST00000407817 KIF6Q6ZMV9 814 aa14.81□□□□□ -0.04
TCN2-203ENST00000407817 DDRGK1Q96HY6 314 aa14.81□□□□□ -0.04
TCN2-203ENST00000407817 BCL11BQ9C0K0 894 aaPredicted RBP14.81□□□□□ -0.04
TCN2-203ENST00000407817 A0A087WZG4 1122 aa14.8□□□□□ -0.04
TCN2-203ENST00000407817 UBE3BQ7Z3V4 1068 aa14.8□□□□□ -0.04
TCN2-203ENST00000407817 KIF1BPQ96EK5 621 aa14.8□□□□□ -0.04
TCN2-203ENST00000407817 ARXQ96QS3 562 aa14.8□□□□□ -0.04
TCN2-203ENST00000407817 NUP98P52948 1817 aa14.8□□□□□ -0.04
TCN2-203ENST00000407817 ATP6V1AP38606 617 aa14.8□□□□□ -0.04
TCN2-203ENST00000407817 KAZALD1Q96I82 304 aa14.8□□□□□ -0.04
TCN2-203ENST00000407817 CWC25Q9NXE8 425 aaPredicted RBP14.8□□□□□ -0.04
TCN2-203ENST00000407817 ANKRD36CQ5JPF3 1778 aa14.79□□□□□ -0.04
TCN2-203ENST00000407817 GSPT1P15170 499 aaKnown RBP14.79□□□□□ -0.04
TCN2-203ENST00000407817 MFAP1P55081 439 aaKnown RBP14.79□□□□□ -0.04
TCN2-203ENST00000407817 RHPN1Q8TCX5 695 aa14.79□□□□□ -0.04
TCN2-203ENST00000407817 IL1RAPL2Q9NP60 686 aa14.79□□□□□ -0.04
TCN2-203ENST00000407817 ZBTB1Q9Y2K1 713 aa14.79□□□□□ -0.04
TCN2-203ENST00000407817 MX1P20591 662 aa14.78□□□□□ -0.04
TCN2-203ENST00000407817 PDE1AP54750 535 aa14.78□□□□□ -0.04
TCN2-203ENST00000407817 INTS5Q6P9B9 1019 aaKnown RBP14.78□□□□□ -0.04
TCN2-203ENST00000407817 OSBPL3Q9H4L5 887 aa14.78□□□□□ -0.04
TCN2-203ENST00000407817 CDC45O75419 566 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms