RNA–Protein interactions for RNA: ENST00000404319.1

NIP7P3-201, Transcript of NIP7, nucleolar pre-rRNA processing protein pseudogene 3, humanhuman

BASIC

Gene NIP7P3, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7P3-201ENST00000404319 TPTE2Q6XPS3 522 aa11.9□□□□□ -0.5
NIP7P3-201ENST00000404319 FMNL2Q96PY5 1086 aa11.9□□□□□ -0.5
NIP7P3-201ENST00000404319 BEGAINQ9BUH8 593 aa11.9□□□□□ -0.5
NIP7P3-201ENST00000404319 TAF1DQ9H5J8 278 aaPredicted RBP11.9□□□□□ -0.5
NIP7P3-201ENST00000404319 ZNF652Q9Y2D9 606 aa11.9□□□□□ -0.5
NIP7P3-201ENST00000404319 ADAMTS7Q9UKP4 1686 aa11.9□□□□□ -0.5
NIP7P3-201ENST00000404319 DLEC1Q9Y238 1755 aa11.9□□□□□ -0.51
NIP7P3-201ENST00000404319 ALDH1B1P30837 517 aa11.89□□□□□ -0.51
NIP7P3-201ENST00000404319 VEGFBP49765 207 aa11.89□□□□□ -0.51
NIP7P3-201ENST00000404319 TRIM26Q12899 539 aaPredicted RBP11.89□□□□□ -0.51
NIP7P3-201ENST00000404319 CCDC93Q567U6 631 aa11.89□□□□□ -0.51
NIP7P3-201ENST00000404319 EAPPQ56P03 285 aaPredicted RBP11.89□□□□□ -0.51
NIP7P3-201ENST00000404319 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
NIP7P3-201ENST00000404319 GAS2L2Q8NHY3 880 aa11.89□□□□□ -0.51
NIP7P3-201ENST00000404319 WBP1LQ9NX94 342 aa11.89□□□□□ -0.51
NIP7P3-201ENST00000404319 HACL1Q9UJ83 578 aa11.89□□□□□ -0.51
NIP7P3-201ENST00000404319 DICER1Q9UPY3 1922 aaKnown RBP11.89□□□□□ -0.51
NIP7P3-201ENST00000404319 TIAM2Q8IVF5 1701 aa11.89□□□□□ -0.51
NIP7P3-201ENST00000404319 PASKQ96RG2 1323 aa11.88□□□□□ -0.51
NIP7P3-201ENST00000404319 HSPA5P11021 654 aaKnown RBP11.88□□□□□ -0.51
NIP7P3-201ENST00000404319 NPR1P16066 1061 aa11.88□□□□□ -0.51
NIP7P3-201ENST00000404319 ZNF496Q96IT1 587 aaPredicted RBP11.88□□□□□ -0.51
NIP7P3-201ENST00000404319 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
NIP7P3-201ENST00000404319 ITGBL1O95965 494 aaPredicted RBP11.87□□□□□ -0.51
NIP7P3-201ENST00000404319 FKBP4Q02790 459 aaKnown RBP eCLIP11.87□□□□□ -0.51
NIP7P3-201ENST00000404319 DZIP3Q86Y13 1208 aaKnown RBP11.87□□□□□ -0.51
NIP7P3-201ENST00000404319 JDP2Q8WYK2 163 aa11.87□□□□□ -0.51
NIP7P3-201ENST00000404319 HEG1Q9ULI3 1381 aa11.87□□□□□ -0.51
NIP7P3-201ENST00000404319 MRC1P22897 1456 aa11.87□□□□□ -0.51
NIP7P3-201ENST00000404319 RGL2O15211 777 aa11.86□□□□□ -0.51
NIP7P3-201ENST00000404319 POTEIP0CG38 1075 aa11.86□□□□□ -0.51
NIP7P3-201ENST00000404319 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
NIP7P3-201ENST00000404319 GTF2E1P29083 439 aaPredicted RBP11.86□□□□□ -0.51
NIP7P3-201ENST00000404319 EPHX2P34913 555 aa11.86□□□□□ -0.51
NIP7P3-201ENST00000404319 LBX1P52954 281 aa11.86□□□□□ -0.51
NIP7P3-201ENST00000404319 GRIPAP1Q4V328 841 aa11.86□□□□□ -0.51
NIP7P3-201ENST00000404319 CNTROBQ8N137 903 aa11.86□□□□□ -0.51
NIP7P3-201ENST00000404319 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
NIP7P3-201ENST00000404319 ABT1Q9ULW3 272 aaKnown RBP11.86□□□□□ -0.51
NIP7P3-201ENST00000404319 FER1L6Q2WGJ9 1857 aa11.86□□□□□ -0.51
NIP7P3-201ENST00000404319 SCN4AP35499 1836 aa11.86□□□□□ -0.51
NIP7P3-201ENST00000404319 RASSF10A6NK89 507 aa11.85□□□□□ -0.51
NIP7P3-201ENST00000404319 BTBD11A6QL63 1104 aa11.85□□□□□ -0.51
NIP7P3-201ENST00000404319 CAMTA2O94983 1202 aa11.85□□□□□ -0.51
NIP7P3-201ENST00000404319 A1BGP04217 495 aa11.85□□□□□ -0.51
NIP7P3-201ENST00000404319 ECE1P42892 770 aa11.85□□□□□ -0.51
NIP7P3-201ENST00000404319 CC2D2BQ6DHV5 1058 aa11.85□□□□□ -0.51
NIP7P3-201ENST00000404319 GPC2Q8N158 579 aa11.85□□□□□ -0.51
NIP7P3-201ENST00000404319 C7orf43Q8WVR3 580 aa11.85□□□□□ -0.51
NIP7P3-201ENST00000404319 LMOD1P29536 600 aaPredicted RBP11.84□□□□□ -0.51
NIP7P3-201ENST00000404319 EIF6P56537 245 aaKnown RBP11.84□□□□□ -0.51
NIP7P3-201ENST00000404319 AMER1Q5JTC6 1135 aaPredicted RBP11.84□□□□□ -0.51
NIP7P3-201ENST00000404319 IL17REQ8NFR9 667 aa11.84□□□□□ -0.51
NIP7P3-201ENST00000404319 TMX4Q9H1E5 349 aaPredicted RBP11.84□□□□□ -0.51
NIP7P3-201ENST00000404319 ZNF277Q9NRM2 450 aaPredicted RBP11.84□□□□□ -0.51
NIP7P3-201ENST00000404319 WDR33Q9C0J8 1336 aaKnown RBP11.84□□□□□ -0.51
NIP7P3-201ENST00000404319 KLRG2A4D1S0 409 aaPredicted RBP11.83□□□□□ -0.52
NIP7P3-201ENST00000404319 U2SURPO15042 1029 aaKnown RBP11.83□□□□□ -0.52
NIP7P3-201ENST00000404319 SNRPA1P09661 255 aaKnown RBP11.83□□□□□ -0.52
NIP7P3-201ENST00000404319 SYNE4Q8N205 404 aa11.83□□□□□ -0.52
NIP7P3-201ENST00000404319 ABHD8Q96I13 439 aa11.83□□□□□ -0.52
NIP7P3-201ENST00000404319 SLX4Q8IY92 1834 aa11.82□□□□□ -0.52
NIP7P3-201ENST00000404319 FZD9O00144 591 aa11.82□□□□□ -0.52
NIP7P3-201ENST00000404319 IARSP41252 1262 aaKnown RBP11.82□□□□□ -0.52
NIP7P3-201ENST00000404319 MLLT1Q03111 559 aaPredicted RBP11.82□□□□□ -0.52
NIP7P3-201ENST00000404319 MAP1SQ66K74 1059 aaPredicted RBP11.82□□□□□ -0.52
NIP7P3-201ENST00000404319 RTF1Q92541 710 aaKnown RBP11.82□□□□□ -0.52
NIP7P3-201ENST00000404319 NYXQ9GZU5 481 aa11.82□□□□□ -0.52
NIP7P3-201ENST00000404319 NIP7Q9Y221 180 aaKnown RBP eCLIP11.82□□□□□ -0.52
NIP7P3-201ENST00000404319 PAXIP1Q6ZW49 1069 aaPredicted RBP11.81□□□□□ -0.52
NIP7P3-201ENST00000404319 PSMD1Q99460 953 aa11.81□□□□□ -0.52
NIP7P3-201ENST00000404319 PCGF6Q9BYE7 350 aa11.81□□□□□ -0.52
NIP7P3-201ENST00000404319 DDX21Q9NR30 783 aaKnown RBP eCLIP11.81□□□□□ -0.52
NIP7P3-201ENST00000404319 ANKRD31Q8N7Z5 1873 aa11.8□□□□□ -0.52
NIP7P3-201ENST00000404319 CCDC85CA6NKD9 419 aa11.8□□□□□ -0.52
NIP7P3-201ENST00000404319 CA12O43570 354 aa11.8□□□□□ -0.52
NIP7P3-201ENST00000404319 SLC34A2O95436 690 aa11.8□□□□□ -0.52
NIP7P3-201ENST00000404319 HSPA8P11142 646 aaKnown RBP11.8□□□□□ -0.52
NIP7P3-201ENST00000404319 MAP2K2P36507 400 aa11.8□□□□□ -0.52
NIP7P3-201ENST00000404319 USP50Q70EL3 339 aaPredicted RBP11.8□□□□□ -0.52
NIP7P3-201ENST00000404319 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
NIP7P3-201ENST00000404319 GPR101Q96P66 508 aaPredicted RBP11.8□□□□□ -0.52
NIP7P3-201ENST00000404319 PCDH10Q9P2E7 1040 aa11.8□□□□□ -0.52
NIP7P3-201ENST00000404319 NUDCQ9Y266 331 aa11.8□□□□□ -0.52
NIP7P3-201ENST00000404319 USP16Q9Y5T5 823 aa11.8□□□□□ -0.52
NIP7P3-201ENST00000404319 UBR2Q8IWV8 1755 aa11.79□□□□□ -0.52
NIP7P3-201ENST00000404319 CC2D1BQ5T0F9 858 aaKnown RBP11.79□□□□□ -0.52
NIP7P3-201ENST00000404319 GJA3Q9Y6H8 435 aa11.79□□□□□ -0.52
NIP7P3-201ENST00000404319 RNF123Q5XPI4 1314 aa11.79□□□□□ -0.52
NIP7P3-201ENST00000404319 ZNF541Q9H0D2 1346 aa11.79□□□□□ -0.52
NIP7P3-201ENST00000404319 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
NIP7P3-201ENST00000404319 FAM161AQ3B820 660 aa11.78□□□□□ -0.52
NIP7P3-201ENST00000404319 RPGRQ92834 1020 aaKnown RBP11.78□□□□□ -0.52
NIP7P3-201ENST00000404319 CAPNS2Q96L46 248 aa11.78□□□□□ -0.52
NIP7P3-201ENST00000404319 VPS33BQ9H267 617 aa11.78□□□□□ -0.52
NIP7P3-201ENST00000404319 FAM177BA6PVY3 158 aa11.77□□□□□ -0.53
NIP7P3-201ENST00000404319 RGS19P49795 217 aa11.77□□□□□ -0.53
NIP7P3-201ENST00000404319 LARGE2Q8N3Y3 721 aa11.77□□□□□ -0.53
NIP7P3-201ENST00000404319 SCN7AQ01118 1682 aa11.77□□□□□ -0.53
NIP7P3-201ENST00000404319 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms