RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 PPP1R42Q7Z4L9 355 aa16.55■□□□□ 0.24
CEACAM1-206ENST00000403136 SSH3Q8TE77 659 aa16.55■□□□□ 0.24
CEACAM1-206ENST00000403136 ZBTB47Q9UFB7 747 aaPredicted RBP16.55■□□□□ 0.24
CEACAM1-206ENST00000403136 LAMB4A4D0S4 1761 aa16.55■□□□□ 0.24
CEACAM1-206ENST00000403136 GCKRQ14397 625 aa16.54■□□□□ 0.24
CEACAM1-206ENST00000403136 KCNQ2O43526 872 aa16.54■□□□□ 0.24
CEACAM1-206ENST00000403136 POLA2Q14181 598 aa16.54■□□□□ 0.24
CEACAM1-206ENST00000403136 TRPC5Q9UL62 973 aaPredicted RBP16.54■□□□□ 0.24
CEACAM1-206ENST00000403136 ONECUT3O60422 494 aaPredicted RBP16.53■□□□□ 0.24
CEACAM1-206ENST00000403136 MTX1Q13505 466 aa16.52■□□□□ 0.24
CEACAM1-206ENST00000403136 SMARCC1Q92922 1105 aaPredicted RBP16.52■□□□□ 0.24
CEACAM1-206ENST00000403136 ATP5J2-PTCD1G3V325 749 aa16.51■□□□□ 0.23
CEACAM1-206ENST00000403136 APBB1O00213 710 aa16.51■□□□□ 0.23
CEACAM1-206ENST00000403136 SRGAP3O43295 1099 aa16.51■□□□□ 0.23
CEACAM1-206ENST00000403136 SUCLG2Q96I99 432 aa16.51■□□□□ 0.23
CEACAM1-206ENST00000403136 EXOC6BQ9Y2D4 811 aa16.51■□□□□ 0.23
CEACAM1-206ENST00000403136 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.51■□□□□ 0.23
CEACAM1-206ENST00000403136 KAZALD1Q96I82 304 aa16.51■□□□□ 0.23
CEACAM1-206ENST00000403136 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
CEACAM1-206ENST00000403136 DOT1LQ8TEK3 1739 aa16.51■□□□□ 0.23
CEACAM1-206ENST00000403136 LOC102724428A0A0B4J2F2 783 aa16.5■□□□□ 0.23
CEACAM1-206ENST00000403136 SMARCA5O60264 1052 aaPredicted RBP16.5■□□□□ 0.23
CEACAM1-206ENST00000403136 ATP6V1AP38606 617 aa16.5■□□□□ 0.23
CEACAM1-206ENST00000403136 SIK1P57059 783 aa16.5■□□□□ 0.23
CEACAM1-206ENST00000403136 C16orf71Q8IYS4 520 aaPredicted RBP16.5■□□□□ 0.23
CEACAM1-206ENST00000403136 QTRT2Q9H974 415 aaKnown RBP16.5■□□□□ 0.23
CEACAM1-206ENST00000403136 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
CEACAM1-206ENST00000403136 ATRNO75882 1429 aa16.5■□□□□ 0.23
CEACAM1-206ENST00000403136 PLEKHM2Q8IWE5 1019 aa16.49■□□□□ 0.23
CEACAM1-206ENST00000403136 A0A087WZG4 1122 aa16.49■□□□□ 0.23
CEACAM1-206ENST00000403136 RAB11FIP3O75154 756 aa16.49■□□□□ 0.23
CEACAM1-206ENST00000403136 SURF6O75683 361 aaKnown RBP16.49■□□□□ 0.23
CEACAM1-206ENST00000403136 KIF6Q6ZMV9 814 aa16.49■□□□□ 0.23
CEACAM1-206ENST00000403136 LRRCC1Q9C099 1032 aa16.49■□□□□ 0.23
CEACAM1-206ENST00000403136 ZBTB1Q9Y2K1 713 aa16.49■□□□□ 0.23
CEACAM1-206ENST00000403136 PALLDQ8WX93 1383 aa16.48■□□□□ 0.23
CEACAM1-206ENST00000403136 IL6STP40189 918 aaPredicted RBP16.48■□□□□ 0.23
CEACAM1-206ENST00000403136 TCIRG1Q13488 830 aa16.48■□□□□ 0.23
CEACAM1-206ENST00000403136 CCDC191Q8NCU4 936 aa16.48■□□□□ 0.23
CEACAM1-206ENST00000403136 BICC1Q9H694 974 aaKnown RBP16.48■□□□□ 0.23
CEACAM1-206ENST00000403136 H7C1W4 665 aa16.47■□□□□ 0.23
CEACAM1-206ENST00000403136 BMP2KLQ5H9B9 411 aa16.47■□□□□ 0.23
CEACAM1-206ENST00000403136 SEPT12Q8IYM1 358 aa16.47■□□□□ 0.23
CEACAM1-206ENST00000403136 BCL11AQ9H165 835 aa16.47■□□□□ 0.23
CEACAM1-206ENST00000403136 CWC25Q9NXE8 425 aaPredicted RBP16.47■□□□□ 0.23
CEACAM1-206ENST00000403136 NOP58Q9Y2X3 529 aaKnown RBP16.47■□□□□ 0.23
CEACAM1-206ENST00000403136 TRIM28Q13263 835 aaKnown RBP16.46■□□□□ 0.23
CEACAM1-206ENST00000403136 ITPK1Q13572 414 aa16.46■□□□□ 0.23
CEACAM1-206ENST00000403136 HSP90AB4PQ58FF6 505 aa16.46■□□□□ 0.23
CEACAM1-206ENST00000403136 INTS5Q6P9B9 1019 aaKnown RBP16.46■□□□□ 0.23
CEACAM1-206ENST00000403136 UBE3BQ7Z3V4 1068 aa16.46■□□□□ 0.23
CEACAM1-206ENST00000403136 JARID2Q92833 1246 aaPredicted RBP16.46■□□□□ 0.23
CEACAM1-206ENST00000403136 ARXQ96QS3 562 aa16.46■□□□□ 0.23
CEACAM1-206ENST00000403136 ISCA1Q9BUE6 129 aa16.46■□□□□ 0.23
CEACAM1-206ENST00000403136 MAP3K15Q6ZN16 1313 aa16.46■□□□□ 0.23
CEACAM1-206ENST00000403136 CASP7P55210 303 aa16.46■□□□□ 0.22
CEACAM1-206ENST00000403136 NPM2Q86SE8 214 aaKnown RBP16.46■□□□□ 0.22
CEACAM1-206ENST00000403136 CCDC87Q9NVE4 849 aa16.46■□□□□ 0.22
CEACAM1-206ENST00000403136 THSD7AQ9UPZ6 1657 aa16.45■□□□□ 0.22
CEACAM1-206ENST00000403136 EPHA10Q5JZY3 1008 aa16.45■□□□□ 0.22
CEACAM1-206ENST00000403136 FAM182BQ5T319 152 aa16.45■□□□□ 0.22
CEACAM1-206ENST00000403136 OTUD7AQ8TE49 926 aaPredicted RBP16.45■□□□□ 0.22
CEACAM1-206ENST00000403136 COL15A1P39059 1388 aa16.45■□□□□ 0.22
CEACAM1-206ENST00000403136 CRKLP46109 303 aaKnown RBP16.44■□□□□ 0.22
CEACAM1-206ENST00000403136 EIF5P55010 431 aaKnown RBP16.44■□□□□ 0.22
CEACAM1-206ENST00000403136 GIGYF2Q6Y7W6 1299 aaKnown RBP16.44■□□□□ 0.22
CEACAM1-206ENST00000403136 PTF1AQ7RTS3 328 aa16.44■□□□□ 0.22
CEACAM1-206ENST00000403136 RHPN1Q8TCX5 695 aa16.43■□□□□ 0.22
CEACAM1-206ENST00000403136 ARFGEF2Q9Y6D5 1785 aa16.43■□□□□ 0.22
CEACAM1-206ENST00000403136 ERVV-1B6SEH8 477 aa16.43■□□□□ 0.22
CEACAM1-206ENST00000403136 SEC24BO95487 1268 aa16.43■□□□□ 0.22
CEACAM1-206ENST00000403136 HLFQ16534 295 aa16.43■□□□□ 0.22
CEACAM1-206ENST00000403136 RABL6Q3YEC7 729 aaPredicted RBP16.43■□□□□ 0.22
CEACAM1-206ENST00000403136 HSP90AB3PQ58FF7 597 aa16.43■□□□□ 0.22
CEACAM1-206ENST00000403136 KIF1BPQ96EK5 621 aa16.43■□□□□ 0.22
CEACAM1-206ENST00000403136 OSBPL3Q9H4L5 887 aa16.43■□□□□ 0.22
CEACAM1-206ENST00000403136 DZIP3Q86Y13 1208 aaKnown RBP16.42■□□□□ 0.22
CEACAM1-206ENST00000403136 TBC1D2BQ9UPU7 963 aa16.42■□□□□ 0.22
CEACAM1-206ENST00000403136 PDE1AP54750 535 aa16.41■□□□□ 0.22
CEACAM1-206ENST00000403136 TTC22Q5TAA0 569 aa16.41■□□□□ 0.22
CEACAM1-206ENST00000403136 PA2G4Q9UQ80 394 aaKnown RBP16.41■□□□□ 0.22
CEACAM1-206ENST00000403136 TJP1Q07157 1748 aa16.41■□□□□ 0.22
CEACAM1-206ENST00000403136 ANP32AP39687 249 aaKnown RBP16.41■□□□□ 0.22
CEACAM1-206ENST00000403136 FOXO4P98177 505 aa16.41■□□□□ 0.22
CEACAM1-206ENST00000403136 OS9Q13438 667 aaPredicted RBP16.41■□□□□ 0.22
CEACAM1-206ENST00000403136 IL1RAPL2Q9NP60 686 aa16.41■□□□□ 0.22
CEACAM1-206ENST00000403136 SALL3Q9BXA9 1300 aa16.4■□□□□ 0.22
CEACAM1-206ENST00000403136 GSPT1P15170 499 aaKnown RBP16.4■□□□□ 0.22
CEACAM1-206ENST00000403136 G3BP1Q13283 466 aaKnown RBP eCLIP16.4■□□□□ 0.22
CEACAM1-206ENST00000403136 RTL5Q5HYW3 569 aaPredicted RBP16.4■□□□□ 0.22
CEACAM1-206ENST00000403136 ERC1Q8IUD2 1116 aa16.4■□□□□ 0.22
CEACAM1-206ENST00000403136 NUP188Q5SRE5 1749 aa16.4■□□□□ 0.22
CEACAM1-206ENST00000403136 LMBR1LQ6UX01 489 aa16.39■□□□□ 0.21
CEACAM1-206ENST00000403136 STAP2Q9UGK3 403 aa16.39■□□□□ 0.21
CEACAM1-206ENST00000403136 PCCAP05165 728 aaPredicted RBP16.38■□□□□ 0.21
CEACAM1-206ENST00000403136 RFX5P48382 616 aaPredicted RBP16.38■□□□□ 0.21
CEACAM1-206ENST00000403136 NLRP10Q86W26 655 aa16.38■□□□□ 0.21
CEACAM1-206ENST00000403136 LINC00116Q8NCU8 138 aa16.38■□□□□ 0.21
CEACAM1-206ENST00000403136 COPRSQ9NQ92 184 aa16.38■□□□□ 0.21
CEACAM1-206ENST00000403136 MX1P20591 662 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms