RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 PLEKHM2Q8IWE5 1019 aa10.7□□□□□ -0.7
LINC02449-202ENST00000399866 DNAJC10Q8IXB1 793 aa10.7□□□□□ -0.7
LINC02449-202ENST00000399866 MARCH10Q8NA82 808 aaPredicted RBP10.7□□□□□ -0.7
LINC02449-202ENST00000399866 SRGAP3O43295 1099 aa10.69□□□□□ -0.7
LINC02449-202ENST00000399866 SEC24BO95487 1268 aa10.69□□□□□ -0.7
LINC02449-202ENST00000399866 PRIM1P49642 420 aaKnown RBP10.69□□□□□ -0.7
LINC02449-202ENST00000399866 GCKRQ14397 625 aa10.69□□□□□ -0.7
LINC02449-202ENST00000399866 TTLL7Q6ZT98 887 aa10.69□□□□□ -0.7
LINC02449-202ENST00000399866 FNBP4Q8N3X1 1017 aaPredicted RBP10.69□□□□□ -0.7
LINC02449-202ENST00000399866 SYTL4Q96C24 671 aaPredicted RBP10.69□□□□□ -0.7
LINC02449-202ENST00000399866 SUCLG2Q96I99 432 aa10.69□□□□□ -0.7
LINC02449-202ENST00000399866 RBM42Q9BTD8 480 aaKnown RBP10.69□□□□□ -0.7
LINC02449-202ENST00000399866 LRRCC1Q9C099 1032 aa10.69□□□□□ -0.7
LINC02449-202ENST00000399866 RREB1Q92766 1687 aa10.69□□□□□ -0.7
LINC02449-202ENST00000399866 COL15A1P39059 1388 aa10.68□□□□□ -0.7
LINC02449-202ENST00000399866 HSPA1LP34931 641 aa10.68□□□□□ -0.7
LINC02449-202ENST00000399866 FAM98CQ17RN3 349 aaKnown RBP10.68□□□□□ -0.7
LINC02449-202ENST00000399866 TTC22Q5TAA0 569 aa10.68□□□□□ -0.7
LINC02449-202ENST00000399866 C16orf71Q8IYS4 520 aaPredicted RBP10.68□□□□□ -0.7
LINC02449-202ENST00000399866 OTUD7AQ8TE49 926 aaPredicted RBP10.68□□□□□ -0.7
LINC02449-202ENST00000399866 SALL3Q9BXA9 1300 aa10.67□□□□□ -0.7
LINC02449-202ENST00000399866 MSH5O43196 834 aa10.67□□□□□ -0.7
LINC02449-202ENST00000399866 RAB11FIP3O75154 756 aa10.67□□□□□ -0.7
LINC02449-202ENST00000399866 STARD3NLO95772 234 aa10.67□□□□□ -0.7
LINC02449-202ENST00000399866 GSPT1P15170 499 aaKnown RBP10.67□□□□□ -0.7
LINC02449-202ENST00000399866 KAZALD1Q96I82 304 aa10.67□□□□□ -0.7
LINC02449-202ENST00000399866 IPO9Q96P70 1041 aaKnown RBP10.67□□□□□ -0.7
LINC02449-202ENST00000399866 SLC4A9Q96Q91 983 aa10.67□□□□□ -0.7
LINC02449-202ENST00000399866 TUBGCP6Q96RT7 1819 aa10.66□□□□□ -0.7
LINC02449-202ENST00000399866 ATP5J2-PTCD1G3V325 749 aa10.66□□□□□ -0.7
LINC02449-202ENST00000399866 SURF6O75683 361 aaKnown RBP10.66□□□□□ -0.7
LINC02449-202ENST00000399866 CYP19A1P11511 503 aaPredicted RBP10.66□□□□□ -0.7
LINC02449-202ENST00000399866 HSP90AB4PQ58FF6 505 aa10.66□□□□□ -0.7
LINC02449-202ENST00000399866 MEX3CQ5U5Q3 659 aaKnown RBP10.66□□□□□ -0.7
LINC02449-202ENST00000399866 ACSBG1Q96GR2 724 aa10.66□□□□□ -0.7
LINC02449-202ENST00000399866 BCL11AQ9H165 835 aa10.66□□□□□ -0.7
LINC02449-202ENST00000399866 ZBTB3Q9H5J0 574 aa10.66□□□□□ -0.7
LINC02449-202ENST00000399866 BICC1Q9H694 974 aaKnown RBP10.66□□□□□ -0.7
LINC02449-202ENST00000399866 UPF2Q9HAU5 1272 aaKnown RBP10.66□□□□□ -0.7
LINC02449-202ENST00000399866 USP21Q9UK80 565 aa10.66□□□□□ -0.7
LINC02449-202ENST00000399866 ZNF831Q5JPB2 1677 aa10.66□□□□□ -0.7
LINC02449-202ENST00000399866 NHSQ6T4R5 1651 aa10.66□□□□□ -0.7
LINC02449-202ENST00000399866 ATRNO75882 1429 aa10.66□□□□□ -0.7
LINC02449-202ENST00000399866 A0A0G2JS52 829 aa10.65□□□□□ -0.7
LINC02449-202ENST00000399866 CDC45O75419 566 aa10.65□□□□□ -0.7
LINC02449-202ENST00000399866 CASP7P55210 303 aa10.65□□□□□ -0.7
LINC02449-202ENST00000399866 KIF6Q6ZMV9 814 aa10.65□□□□□ -0.7
LINC02449-202ENST00000399866 DDRGK1Q96HY6 314 aa10.65□□□□□ -0.7
LINC02449-202ENST00000399866 OSBPL3Q9H4L5 887 aa10.65□□□□□ -0.7
LINC02449-202ENST00000399866 NOP58Q9Y2X3 529 aaKnown RBP10.65□□□□□ -0.7
LINC02449-202ENST00000399866 ANKRD36CQ5JPF3 1778 aa10.65□□□□□ -0.71
LINC02449-202ENST00000399866 PALLDQ8WX93 1383 aa10.65□□□□□ -0.71
LINC02449-202ENST00000399866 AFF2P51816 1311 aa10.64□□□□□ -0.71
LINC02449-202ENST00000399866 AOX1Q06278 1338 aa10.64□□□□□ -0.71
LINC02449-202ENST00000399866 A0A087WZG4 1122 aa10.64□□□□□ -0.71
LINC02449-202ENST00000399866 MX1P20591 662 aa10.64□□□□□ -0.71
LINC02449-202ENST00000399866 PDE1AP54750 535 aa10.64□□□□□ -0.71
LINC02449-202ENST00000399866 MFAP1P55081 439 aaKnown RBP10.64□□□□□ -0.71
LINC02449-202ENST00000399866 EPHA10Q5JZY3 1008 aa10.64□□□□□ -0.71
LINC02449-202ENST00000399866 UBE3BQ7Z3V4 1068 aa10.64□□□□□ -0.71
LINC02449-202ENST00000399866 RHPN1Q8TCX5 695 aa10.64□□□□□ -0.71
LINC02449-202ENST00000399866 KIF1BPQ96EK5 621 aa10.64□□□□□ -0.71
LINC02449-202ENST00000399866 TBC1D32Q96NH3 1257 aa10.64□□□□□ -0.71
LINC02449-202ENST00000399866 CWC25Q9NXE8 425 aaPredicted RBP10.64□□□□□ -0.71
LINC02449-202ENST00000399866 COL5A3P25940 1745 aaPredicted RBP10.64□□□□□ -0.71
LINC02449-202ENST00000399866 MAP3K15Q6ZN16 1313 aa10.63□□□□□ -0.71
LINC02449-202ENST00000399866 H7C1W4 665 aa10.63□□□□□ -0.71
LINC02449-202ENST00000399866 OS9Q13438 667 aaPredicted RBP10.63□□□□□ -0.71
LINC02449-202ENST00000399866 TBC1D9Q6ZT07 1266 aa10.63□□□□□ -0.71
LINC02449-202ENST00000399866 ERC1Q8IUD2 1116 aa10.63□□□□□ -0.71
LINC02449-202ENST00000399866 CCDC191Q8NCU4 936 aa10.63□□□□□ -0.71
LINC02449-202ENST00000399866 JARID2Q92833 1246 aaPredicted RBP10.63□□□□□ -0.71
LINC02449-202ENST00000399866 SMARCC1Q92922 1105 aaPredicted RBP10.63□□□□□ -0.71
LINC02449-202ENST00000399866 ISCA1Q9BUE6 129 aa10.63□□□□□ -0.71
LINC02449-202ENST00000399866 IL1RAPL2Q9NP60 686 aa10.63□□□□□ -0.71
LINC02449-202ENST00000399866 STAP2Q9UGK3 403 aa10.63□□□□□ -0.71
LINC02449-202ENST00000399866 ZBTB1Q9Y2K1 713 aa10.63□□□□□ -0.71
LINC02449-202ENST00000399866 ZNF330Q9Y3S2 320 aaPredicted RBP10.63□□□□□ -0.71
LINC02449-202ENST00000399866 MYT1Q01538 1121 aa10.62□□□□□ -0.71
LINC02449-202ENST00000399866 TCIRG1Q13488 830 aa10.62□□□□□ -0.71
LINC02449-202ENST00000399866 RABL6Q3YEC7 729 aaPredicted RBP10.62□□□□□ -0.71
LINC02449-202ENST00000399866 PA2G4Q9UQ80 394 aaKnown RBP10.62□□□□□ -0.71
LINC02449-202ENST00000399866 LOC102724428A0A0B4J2F2 783 aa10.61□□□□□ -0.71
LINC02449-202ENST00000399866 KCNQ2O43526 872 aa10.61□□□□□ -0.71
LINC02449-202ENST00000399866 SDSP20132 328 aa10.61□□□□□ -0.71
LINC02449-202ENST00000399866 IL6STP40189 918 aaPredicted RBP10.61□□□□□ -0.71
LINC02449-202ENST00000399866 SIK1P57059 783 aa10.61□□□□□ -0.71
LINC02449-202ENST00000399866 TSHZ3Q63HK5 1081 aa10.61□□□□□ -0.71
LINC02449-202ENST00000399866 NUTM1Q86Y26 1132 aa10.61□□□□□ -0.71
LINC02449-202ENST00000399866 CCDC87Q9NVE4 849 aa10.61□□□□□ -0.71
LINC02449-202ENST00000399866 BTAF1O14981 1849 aa10.61□□□□□ -0.71
LINC02449-202ENST00000399866 USP42Q9H9J4 1324 aaKnown RBP10.6□□□□□ -0.71
LINC02449-202ENST00000399866 ATP6V1AP38606 617 aa10.6□□□□□ -0.71
LINC02449-202ENST00000399866 CRKLP46109 303 aaKnown RBP10.6□□□□□ -0.71
LINC02449-202ENST00000399866 RFX5P48382 616 aaPredicted RBP10.6□□□□□ -0.71
LINC02449-202ENST00000399866 FOXO4P98177 505 aa10.6□□□□□ -0.71
LINC02449-202ENST00000399866 TRIM28Q13263 835 aaKnown RBP10.6□□□□□ -0.71
LINC02449-202ENST00000399866 ITPK1Q13572 414 aa10.6□□□□□ -0.71
LINC02449-202ENST00000399866 INTS5Q6P9B9 1019 aaKnown RBP10.6□□□□□ -0.71
LINC02449-202ENST00000399866 GIGYF2Q6Y7W6 1299 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms