RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CTAGE8P0CG41 777 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 CTAGE4Q8IX94 777 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 GSDMBQ8TAX9 411 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 PAXBP1Q9Y5B6 917 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 CDR2Q01850 454 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 CCDC129Q6ZRS4 1044 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 GBP5Q96PP8 586 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 SPECC1L-ADORA2AF8WAN1 911 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 BLVRAP53004 296 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 CLUAP1Q96AJ1 413 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 ZMYND8Q9ULU4 1186 aaPredicted RBP9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 ANGPTL3Q9Y5C1 460 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 ESPNB1AK53 854 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 YEATS4O95619 227 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 MAK16Q9BXY0 300 aaKnown RBP9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 WASHC2CQ9Y4E1 1318 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 LARSQ9P2J5 1176 aaKnown RBP9.82□□□□□ -0.84
CACNA1C-220ENST00000399655 FYB2Q5VWT5 728 aa9.82□□□□□ -0.84
CACNA1C-220ENST00000399655 CCDC63Q8NA47 563 aa9.82□□□□□ -0.84
CACNA1C-220ENST00000399655 CXorf38Q8TB03 319 aa9.82□□□□□ -0.84
CACNA1C-220ENST00000399655 SYTL4Q96C24 671 aaPredicted RBP9.82□□□□□ -0.84
CACNA1C-220ENST00000399655 PFDN1O60925 122 aa9.82□□□□□ -0.84
CACNA1C-220ENST00000399655 BUB1BO60566 1050 aaPredicted RBP9.82□□□□□ -0.84
CACNA1C-220ENST00000399655 RIOK3O14730 519 aaKnown RBP9.82□□□□□ -0.84
CACNA1C-220ENST00000399655 SDCCAG8Q86SQ7 713 aaPredicted RBP9.82□□□□□ -0.84
CACNA1C-220ENST00000399655 KRT83P78385 493 aa9.82□□□□□ -0.84
CACNA1C-220ENST00000399655 SAMD1Q6SPF0 538 aaPredicted RBP9.82□□□□□ -0.84
CACNA1C-220ENST00000399655 TMCO5AQ8N6Q1 288 aa9.82□□□□□ -0.84
CACNA1C-220ENST00000399655 SYNCQ9H7C4 482 aa9.82□□□□□ -0.84
CACNA1C-220ENST00000399655 TRAK2O60296 914 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 RASSF2P50749 326 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 CLNS1AP54105 237 aaKnown RBP9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 CCDC196A0A1B0GTZ2 297 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 COG7P83436 770 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 PYM1Q9BRP8 204 aaKnown RBP9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 MYO18AQ92614 2054 aaKnown RBP9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 INTS8Q75QN2 995 aaKnown RBP9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 FAM186BQ8IYM0 893 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 ZCRB1Q8TBF4 217 aaKnown RBP9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 TRIM8Q9BZR9 551 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 ARHGEF9O43307 516 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 CEP85LQ5SZL2 805 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 MORC4Q8TE76 937 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 ATICP31939 592 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 GFM2Q969S9 779 aaKnown RBP9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 NACAP1Q9BZK3 213 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 CAVIN2O95810 425 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 TUBB4AP04350 444 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 ZFXP17010 805 aaPredicted RBP9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 PDXDC1Q6P996 788 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 TMEM57Q8N5G2 664 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 OPTNQ96CV9 577 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 ZNF131P52739 623 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 SDCCAG3Q96C92 435 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 ARFGAP3Q9NP61 516 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 FAF1Q9UNN5 650 aaPredicted RBP9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 SCAPERQ9BY12 1400 aa9.81□□□□□ -0.84
CACNA1C-220ENST00000399655 CCDC122Q5T0U0 273 aa9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 PHEXP78562 749 aa9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 JADE2Q9NQC1 790 aa9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 SPTY2D1Q68D10 685 aaPredicted RBP9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 PDE4AP27815 886 aa9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 NOP14P78316 857 aaKnown RBP9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 LCA5Q86VQ0 697 aa9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 CCDC138Q96M89 665 aa9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 AKAP2Q9Y2D5 859 aa9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 MCM5P33992 734 aa9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 ZMYND15Q9H091 742 aa9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 EFCC1Q9HA90 598 aa9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 ZNF287Q9HBT7 754 aa9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 ANLNQ9NQW6 1124 aa9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 MICALL1Q8N3F8 863 aa9.8□□□□□ -0.84
CACNA1C-220ENST00000399655 GEN1Q17RS7 908 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 CCDC94Q9BW85 323 aaPredicted RBP9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 CCDC92Q53HC0 331 aaPredicted RBP9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 CCDC102BQ68D86 513 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 CCDC117Q8IWD4 279 aaPredicted RBP9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 C22orf23Q9BZE7 217 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 TRIM4Q9C037 500 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 CTTNBP2NLQ9P2B4 639 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 GIGYF1O75420 1035 aaPredicted RBP9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 PPFIA1Q13136 1202 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 CPLX4Q7Z7G2 160 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 HEATR3Q7Z4Q2 680 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 EHMT1Q9H9B1 1298 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 WASHC4Q2M389 1173 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 RILPL1Q5EBL4 403 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 SCINQ9Y6U3 715 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 EFCAB14O75071 495 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 ZNF76P36508 570 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 MUM1L1Q5H9M0 696 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 ZBTB41Q5SVQ8 909 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 ZSCAN30Q86W11 494 aa9.79□□□□□ -0.84
CACNA1C-220ENST00000399655 LONP1P36776 959 aaKnown RBP9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 NUP88Q99567 741 aaPredicted RBP9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 TEKT2Q9UIF3 430 aa9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 SPATS2Q86XZ4 545 aaKnown RBP9.78□□□□□ -0.84
CACNA1C-220ENST00000399655 TBC1D5Q92609 795 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms