RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 ADAMTS2O95450 1211 aa18.4■□□□□ 0.54
COL25A1-203ENST00000399132 NOL8Q76FK4 1167 aaKnown RBP18.4■□□□□ 0.54
COL25A1-203ENST00000399132 UBE3BQ7Z3V4 1068 aa18.4■□□□□ 0.54
COL25A1-203ENST00000399132 SYTL4Q96C24 671 aaPredicted RBP18.4■□□□□ 0.54
COL25A1-203ENST00000399132 KIF1BPQ96EK5 621 aa18.4■□□□□ 0.54
COL25A1-203ENST00000399132 OSBPL3Q9H4L5 887 aa18.4■□□□□ 0.54
COL25A1-203ENST00000399132 NEURL1BA8MQ27 555 aa18.39■□□□□ 0.53
COL25A1-203ENST00000399132 ERC2O15083 957 aa18.39■□□□□ 0.53
COL25A1-203ENST00000399132 ALDH1L1O75891 902 aa18.39■□□□□ 0.53
COL25A1-203ENST00000399132 ZBTB3Q9H5J0 574 aa18.39■□□□□ 0.53
COL25A1-203ENST00000399132 C5P01031 1676 aa18.39■□□□□ 0.53
COL25A1-203ENST00000399132 PDIA4P13667 645 aaKnown RBP18.39■□□□□ 0.53
COL25A1-203ENST00000399132 TTLL7Q6ZT98 887 aa18.39■□□□□ 0.53
COL25A1-203ENST00000399132 SCN11AQ9UI33 1791 aa18.38■□□□□ 0.53
COL25A1-203ENST00000399132 NBPF26B4DH59 902 aa18.38■□□□□ 0.53
COL25A1-203ENST00000399132 NBPF14Q5TI25 921 aa18.38■□□□□ 0.53
COL25A1-203ENST00000399132 NBPF10Q6P3W6 841 aaKnown RBP18.38■□□□□ 0.53
COL25A1-203ENST00000399132 NBPF15Q8N660 670 aa18.38■□□□□ 0.53
COL25A1-203ENST00000399132 CCDC8Q9H0W5 538 aaPredicted RBP18.38■□□□□ 0.53
COL25A1-203ENST00000399132 CRYBG1Q9Y4K1 1723 aa18.38■□□□□ 0.53
COL25A1-203ENST00000399132 CARD10Q9BWT7 1032 aa18.38■□□□□ 0.53
COL25A1-203ENST00000399132 CHMP3Q9Y3E7 222 aa18.38■□□□□ 0.53
COL25A1-203ENST00000399132 SIPA1L3O60292 1781 aaPredicted RBP18.38■□□□□ 0.53
COL25A1-203ENST00000399132 GCKRQ14397 625 aa18.37■□□□□ 0.53
COL25A1-203ENST00000399132 RAB11FIP3O75154 756 aa18.36■□□□□ 0.53
COL25A1-203ENST00000399132 CHMLP26374 656 aa18.36■□□□□ 0.53
COL25A1-203ENST00000399132 AACSQ86V21 672 aa18.36■□□□□ 0.53
COL25A1-203ENST00000399132 METTL22Q9BUU2 404 aaPredicted RBP18.36■□□□□ 0.53
COL25A1-203ENST00000399132 LRP10Q7Z4F1 713 aa18.36■□□□□ 0.53
COL25A1-203ENST00000399132 A0A087WZG4 1122 aa18.36■□□□□ 0.53
COL25A1-203ENST00000399132 REC8O95072 547 aa18.36■□□□□ 0.53
COL25A1-203ENST00000399132 ESYT1Q9BSJ8 1104 aa18.36■□□□□ 0.53
COL25A1-203ENST00000399132 ASAP1Q9ULH1 1129 aa18.36■□□□□ 0.53
COL25A1-203ENST00000399132 NUTM2BA6NNL0 878 aaPredicted RBP18.35■□□□□ 0.53
COL25A1-203ENST00000399132 NUTM2EB1AL46 878 aaPredicted RBP18.35■□□□□ 0.53
COL25A1-203ENST00000399132 PIP4K2BP78356 416 aa18.35■□□□□ 0.53
COL25A1-203ENST00000399132 NUTM2AQ8IVF1 878 aaPredicted RBP18.35■□□□□ 0.53
COL25A1-203ENST00000399132 CLASRPQ8N2M8 674 aaKnown RBP18.35■□□□□ 0.53
COL25A1-203ENST00000399132 PI4K2BQ8TCG2 481 aa18.35■□□□□ 0.53
COL25A1-203ENST00000399132 TLR7Q9NYK1 1049 aaKnown RBP18.35■□□□□ 0.53
COL25A1-203ENST00000399132 K7ELQ4 463 aaPredicted RBP18.35■□□□□ 0.53
COL25A1-203ENST00000399132 PALD1Q9ULE6 856 aa18.35■□□□□ 0.53
COL25A1-203ENST00000399132 IFIT2P09913 472 aaKnown RBP18.34■□□□□ 0.53
COL25A1-203ENST00000399132 G3BP1Q13283 466 aaKnown RBP eCLIP18.34■□□□□ 0.53
COL25A1-203ENST00000399132 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
COL25A1-203ENST00000399132 TMOD3Q9NYL9 352 aa18.34■□□□□ 0.53
COL25A1-203ENST00000399132 STAP2Q9UGK3 403 aa18.34■□□□□ 0.53
COL25A1-203ENST00000399132 SASH1O94885 1247 aa18.33■□□□□ 0.53
COL25A1-203ENST00000399132 SNX21Q969T3 373 aa18.33■□□□□ 0.53
COL25A1-203ENST00000399132 CHMP5Q9NZZ3 219 aa18.33■□□□□ 0.53
COL25A1-203ENST00000399132 CCDC85AQ96PX6 553 aaPredicted RBP18.33■□□□□ 0.52
COL25A1-203ENST00000399132 GZF1Q9H116 711 aaPredicted RBP18.32■□□□□ 0.52
COL25A1-203ENST00000399132 NDUFB9Q9Y6M9 179 aa18.32■□□□□ 0.52
COL25A1-203ENST00000399132 ADAMTS7Q9UKP4 1686 aa18.31■□□□□ 0.52
COL25A1-203ENST00000399132 EAF2Q96CJ1 260 aaPredicted RBP18.31■□□□□ 0.52
COL25A1-203ENST00000399132 HSP90AA2PQ14568 343 aaPredicted RBP18.31■□□□□ 0.52
COL25A1-203ENST00000399132 HSP90AB4PQ58FF6 505 aa18.31■□□□□ 0.52
COL25A1-203ENST00000399132 PIGBQ92521 554 aa18.31■□□□□ 0.52
COL25A1-203ENST00000399132 UPF3BQ9BZI7 483 aaKnown RBP18.31■□□□□ 0.52
COL25A1-203ENST00000399132 ERVV-2B6SEH9 535 aa18.3■□□□□ 0.52
COL25A1-203ENST00000399132 NEK4P51957 841 aa18.3■□□□□ 0.52
COL25A1-203ENST00000399132 MTX1Q13505 466 aa18.3■□□□□ 0.52
COL25A1-203ENST00000399132 RABEP1Q15276 862 aa18.3■□□□□ 0.52
COL25A1-203ENST00000399132 DNAJC10Q8IXB1 793 aa18.29■□□□□ 0.52
COL25A1-203ENST00000399132 BOLA2Q9H3K6 86 aa18.29■□□□□ 0.52
COL25A1-203ENST00000399132 LMBR1LQ6UX01 489 aa18.29■□□□□ 0.52
COL25A1-203ENST00000399132 EDC3Q96F86 508 aaKnown RBP18.29■□□□□ 0.52
COL25A1-203ENST00000399132 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
COL25A1-203ENST00000399132 N4BP2Q86UW6 1770 aaPredicted RBP18.28■□□□□ 0.52
COL25A1-203ENST00000399132 PKD1L3Q7Z443 1732 aa18.28■□□□□ 0.52
COL25A1-203ENST00000399132 CNTROBQ8N137 903 aa18.28■□□□□ 0.52
COL25A1-203ENST00000399132 PLBD2Q8NHP8 589 aa18.28■□□□□ 0.52
COL25A1-203ENST00000399132 DTNBO60941 627 aa18.28■□□□□ 0.52
COL25A1-203ENST00000399132 FOXD4L5Q5VV16 416 aaPredicted RBP18.28■□□□□ 0.52
COL25A1-203ENST00000399132 FOXD4L4Q8WXT5 416 aaPredicted RBP18.28■□□□□ 0.52
COL25A1-203ENST00000399132 RRAGDQ9NQL2 400 aaPredicted RBP18.28■□□□□ 0.52
COL25A1-203ENST00000399132 RRP9O43818 475 aaKnown RBP18.27■□□□□ 0.52
COL25A1-203ENST00000399132 ZGPATQ8N5A5 531 aaKnown RBP18.27■□□□□ 0.52
COL25A1-203ENST00000399132 ECHDC1Q9NTX5 307 aa18.27■□□□□ 0.52
COL25A1-203ENST00000399132 PDE4CQ08493 712 aa18.26■□□□□ 0.51
COL25A1-203ENST00000399132 TFCP2Q12800 502 aa18.26■□□□□ 0.51
COL25A1-203ENST00000399132 TNPO1Q92973 898 aaKnown RBP18.26■□□□□ 0.51
COL25A1-203ENST00000399132 ACSBG1Q96GR2 724 aa18.26■□□□□ 0.51
COL25A1-203ENST00000399132 UTYO14607 1347 aa18.26■□□□□ 0.51
COL25A1-203ENST00000399132 MRC1P22897 1456 aa18.26■□□□□ 0.51
COL25A1-203ENST00000399132 ZNF594Q96JF6 807 aaPredicted RBP18.26■□□□□ 0.51
COL25A1-203ENST00000399132 HDAC5Q9UQL6 1122 aa18.26■□□□□ 0.51
COL25A1-203ENST00000399132 ST18O60284 1047 aa18.25■□□□□ 0.51
COL25A1-203ENST00000399132 GLRX3O76003 335 aaKnown RBP18.25■□□□□ 0.51
COL25A1-203ENST00000399132 SSFA2P28290 1259 aa18.25■□□□□ 0.51
COL25A1-203ENST00000399132 MCM4P33991 863 aa18.25■□□□□ 0.51
COL25A1-203ENST00000399132 PKP1Q13835 747 aa18.25■□□□□ 0.51
COL25A1-203ENST00000399132 NKX1-1Q15270 411 aaPredicted RBP18.25■□□□□ 0.51
COL25A1-203ENST00000399132 DIAPH3Q9NSV4 1193 aa18.25■□□□□ 0.51
COL25A1-203ENST00000399132 CHGBP05060 677 aa18.24■□□□□ 0.51
COL25A1-203ENST00000399132 GPTP24298 496 aa18.24■□□□□ 0.51
COL25A1-203ENST00000399132 ERC1Q8IUD2 1116 aa18.24■□□□□ 0.51
COL25A1-203ENST00000399132 ATG3Q9NT62 314 aa18.24■□□□□ 0.51
COL25A1-203ENST00000399132 PTPN12Q05209 780 aaKnown RBP18.24■□□□□ 0.51
COL25A1-203ENST00000399132 SYNE4Q8N205 404 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms