RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 C8orf37Q96NL8 207 aa18.79■□□□□ 0.6
COL25A1-201ENST00000399126 IPO9Q96P70 1041 aaKnown RBP18.79■□□□□ 0.6
COL25A1-201ENST00000399126 LINS1Q8NG48 757 aa18.78■□□□□ 0.6
COL25A1-201ENST00000399126 MYD88Q99836 296 aa18.78■□□□□ 0.6
COL25A1-201ENST00000399126 ATG3Q9NT62 314 aa18.78■□□□□ 0.6
COL25A1-201ENST00000399126 C9orf78Q9NZ63 289 aaPredicted RBP18.78■□□□□ 0.6
COL25A1-201ENST00000399126 SPATA31A5Q5VU36 1347 aa18.78■□□□□ 0.6
COL25A1-201ENST00000399126 SPATA31A7Q8IWB4 1347 aa18.78■□□□□ 0.6
COL25A1-201ENST00000399126 ALDH1L1O75891 902 aa18.78■□□□□ 0.6
COL25A1-201ENST00000399126 ANKRD13DQ6ZTN6 518 aa18.78■□□□□ 0.6
COL25A1-201ENST00000399126 NWD2Q9ULI1 1742 aa18.78■□□□□ 0.6
COL25A1-201ENST00000399126 ARFGEF2Q9Y6D5 1785 aa18.78■□□□□ 0.6
COL25A1-201ENST00000399126 NBR1Q14596 966 aa18.77■□□□□ 0.6
COL25A1-201ENST00000399126 DOT1LQ8TEK3 1739 aa18.77■□□□□ 0.6
COL25A1-201ENST00000399126 SRGAP3O43295 1099 aa18.77■□□□□ 0.6
COL25A1-201ENST00000399126 GSPT1P15170 499 aaKnown RBP18.77■□□□□ 0.59
COL25A1-201ENST00000399126 TTLL7Q6ZT98 887 aa18.77■□□□□ 0.59
COL25A1-201ENST00000399126 SSH3Q8TE77 659 aa18.77■□□□□ 0.59
COL25A1-201ENST00000399126 JARID2Q92833 1246 aaPredicted RBP18.77■□□□□ 0.59
COL25A1-201ENST00000399126 DDB1Q16531 1140 aa18.76■□□□□ 0.59
COL25A1-201ENST00000399126 RBM42Q9BTD8 480 aaKnown RBP18.76■□□□□ 0.59
COL25A1-201ENST00000399126 BCL9O00512 1426 aa18.76■□□□□ 0.59
COL25A1-201ENST00000399126 NEURL1BA8MQ27 555 aa18.76■□□□□ 0.59
COL25A1-201ENST00000399126 BMP2KLQ5H9B9 411 aa18.76■□□□□ 0.59
COL25A1-201ENST00000399126 DNAJC10Q8IXB1 793 aa18.76■□□□□ 0.59
COL25A1-201ENST00000399126 KAZALD1Q96I82 304 aa18.76■□□□□ 0.59
COL25A1-201ENST00000399126 METTL22Q9BUU2 404 aaPredicted RBP18.76■□□□□ 0.59
COL25A1-201ENST00000399126 ZBTB47Q9UFB7 747 aaPredicted RBP18.76■□□□□ 0.59
COL25A1-201ENST00000399126 JCADQ9P266 1359 aa18.75■□□□□ 0.59
COL25A1-201ENST00000399126 ATP5J2-PTCD1G3V325 749 aa18.75■□□□□ 0.59
COL25A1-201ENST00000399126 GRM8O00222 908 aa18.75■□□□□ 0.59
COL25A1-201ENST00000399126 PRIM1P49642 420 aaKnown RBP18.75■□□□□ 0.59
COL25A1-201ENST00000399126 IBTKQ9P2D0 1353 aaPredicted RBP18.75■□□□□ 0.59
COL25A1-201ENST00000399126 AFDNP55196 1824 aaKnown RBP18.75■□□□□ 0.59
COL25A1-201ENST00000399126 A0A0G2JS52 829 aa18.75■□□□□ 0.59
COL25A1-201ENST00000399126 POLA2Q14181 598 aa18.75■□□□□ 0.59
COL25A1-201ENST00000399126 SUCLG2Q96I99 432 aa18.75■□□□□ 0.59
COL25A1-201ENST00000399126 NGLY1Q96IV0 654 aa18.75■□□□□ 0.59
COL25A1-201ENST00000399126 SLC4A9Q96Q91 983 aa18.75■□□□□ 0.59
COL25A1-201ENST00000399126 RTL5Q5HYW3 569 aaPredicted RBP18.74■□□□□ 0.59
COL25A1-201ENST00000399126 TSHZ3Q63HK5 1081 aa18.74■□□□□ 0.59
COL25A1-201ENST00000399126 MARCH10Q8NA82 808 aaPredicted RBP18.74■□□□□ 0.59
COL25A1-201ENST00000399126 CERKQ8TCT0 537 aa18.74■□□□□ 0.59
COL25A1-201ENST00000399126 ACSBG1Q96GR2 724 aa18.74■□□□□ 0.59
COL25A1-201ENST00000399126 LRP6O75581 1613 aa18.74■□□□□ 0.59
COL25A1-201ENST00000399126 BCL9LQ86UU0 1499 aa18.73■□□□□ 0.59
COL25A1-201ENST00000399126 HSP90B1P14625 803 aaKnown RBP18.73■□□□□ 0.59
COL25A1-201ENST00000399126 THRAP3Q9Y2W1 955 aaKnown RBP18.73■□□□□ 0.59
COL25A1-201ENST00000399126 ZNF330Q9Y3S2 320 aaPredicted RBP18.73■□□□□ 0.59
COL25A1-201ENST00000399126 SURF6O75683 361 aaKnown RBP18.73■□□□□ 0.59
COL25A1-201ENST00000399126 NEXNQ0ZGT2 675 aa18.73■□□□□ 0.59
COL25A1-201ENST00000399126 GCKRQ14397 625 aa18.73■□□□□ 0.59
COL25A1-201ENST00000399126 UNC5CLQ8IV45 518 aa18.73■□□□□ 0.59
COL25A1-201ENST00000399126 MFAP1P55081 439 aaKnown RBP18.72■□□□□ 0.59
COL25A1-201ENST00000399126 FAM98CQ17RN3 349 aaKnown RBP18.72■□□□□ 0.59
COL25A1-201ENST00000399126 LRRCC1Q9C099 1032 aa18.72■□□□□ 0.59
COL25A1-201ENST00000399126 IL1RAPL2Q9NP60 686 aa18.72■□□□□ 0.59
COL25A1-201ENST00000399126 NOP58Q9Y2X3 529 aaKnown RBP18.72■□□□□ 0.59
COL25A1-201ENST00000399126 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.72■□□□□ 0.59
COL25A1-201ENST00000399126 ZBTB3Q9H5J0 574 aa18.72■□□□□ 0.59
COL25A1-201ENST00000399126 BICC1Q9H694 974 aaKnown RBP18.72■□□□□ 0.59
COL25A1-201ENST00000399126 UTYO14607 1347 aa18.71■□□□□ 0.59
COL25A1-201ENST00000399126 ERBB4Q15303 1308 aa18.71■□□□□ 0.59
COL25A1-201ENST00000399126 TTC22Q5TAA0 569 aa18.71■□□□□ 0.59
COL25A1-201ENST00000399126 CDCA7Q9BWT1 371 aaPredicted RBP18.71■□□□□ 0.59
COL25A1-201ENST00000399126 NUP188Q5SRE5 1749 aa18.71■□□□□ 0.59
COL25A1-201ENST00000399126 PLBD2Q8NHP8 589 aa18.71■□□□□ 0.59
COL25A1-201ENST00000399126 EPHA10Q5JZY3 1008 aa18.7■□□□□ 0.58
COL25A1-201ENST00000399126 PA2G4Q9UQ80 394 aaKnown RBP18.7■□□□□ 0.58
COL25A1-201ENST00000399126 EP400Q96L91 3159 aa18.69■□□□□ 0.58
COL25A1-201ENST00000399126 SLC4A3P48751 1232 aa18.69■□□□□ 0.58
COL25A1-201ENST00000399126 BARGINQ6ZT62 677 aa18.69■□□□□ 0.58
COL25A1-201ENST00000399126 SALL3Q9BXA9 1300 aa18.69■□□□□ 0.58
COL25A1-201ENST00000399126 MTX1Q13505 466 aa18.68■□□□□ 0.58
COL25A1-201ENST00000399126 TBC1D9Q6ZT07 1266 aa18.68■□□□□ 0.58
COL25A1-201ENST00000399126 ZMYND15Q9H091 742 aa18.68■□□□□ 0.58
COL25A1-201ENST00000399126 HSPA1LP34931 641 aa18.68■□□□□ 0.58
COL25A1-201ENST00000399126 PDE1AP54750 535 aa18.68■□□□□ 0.58
COL25A1-201ENST00000399126 UBE3BQ7Z3V4 1068 aa18.67■□□□□ 0.58
COL25A1-201ENST00000399126 VSIG10Q8N0Z9 540 aa18.67■□□□□ 0.58
COL25A1-201ENST00000399126 TBC1D32Q96NH3 1257 aa18.67■□□□□ 0.58
COL25A1-201ENST00000399126 NUTM1Q86Y26 1132 aa18.67■□□□□ 0.58
COL25A1-201ENST00000399126 KLHDC4Q8TBB5 520 aa18.67■□□□□ 0.58
COL25A1-201ENST00000399126 RHPN1Q8TCX5 695 aa18.67■□□□□ 0.58
COL25A1-201ENST00000399126 KCNQ2O43526 872 aa18.66■□□□□ 0.58
COL25A1-201ENST00000399126 SDSP20132 328 aa18.66■□□□□ 0.58
COL25A1-201ENST00000399126 A0A087WZG4 1122 aa18.66■□□□□ 0.58
COL25A1-201ENST00000399126 VPS72Q15906 364 aa18.66■□□□□ 0.58
COL25A1-201ENST00000399126 TJP1Q07157 1748 aa18.65■□□□□ 0.58
COL25A1-201ENST00000399126 RBM10P98175 930 aaKnown RBP18.65■□□□□ 0.58
COL25A1-201ENST00000399126 FNBP4Q8N3X1 1017 aaPredicted RBP18.65■□□□□ 0.58
COL25A1-201ENST00000399126 UPF2Q9HAU5 1272 aaKnown RBP18.65■□□□□ 0.58
COL25A1-201ENST00000399126 CYP19A1P11511 503 aaPredicted RBP18.65■□□□□ 0.58
COL25A1-201ENST00000399126 MX1P20591 662 aa18.65■□□□□ 0.58
COL25A1-201ENST00000399126 USP21Q9UK80 565 aa18.65■□□□□ 0.58
COL25A1-201ENST00000399126 ZBTB1Q9Y2K1 713 aa18.65■□□□□ 0.58
COL25A1-201ENST00000399126 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.65■□□□□ 0.58
COL25A1-201ENST00000399126 STARD3NLO95772 234 aa18.64■□□□□ 0.57
COL25A1-201ENST00000399126 TUBGCP6Q96RT7 1819 aa18.64■□□□□ 0.57
COL25A1-201ENST00000399126 CASP7P55210 303 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms