RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 BICC1Q9H694 974 aaKnown RBP16.17■□□□□ 0.18
TOP3B-202ENST00000398793 ALS2Q96Q42 1657 aa16.17■□□□□ 0.18
TOP3B-202ENST00000398793 GOLGA6L3A6NEY3 463 aa16.17■□□□□ 0.18
TOP3B-202ENST00000398793 DDX58O95786 925 aaKnown RBP16.17■□□□□ 0.18
TOP3B-202ENST00000398793 IGKV5-2P06315 115 aa16.17■□□□□ 0.18
TOP3B-202ENST00000398793 SUCLG2Q96I99 432 aa16.17■□□□□ 0.18
TOP3B-202ENST00000398793 BEND3Q5T5X7 828 aa16.16■□□□□ 0.18
TOP3B-202ENST00000398793 INTS3Q68E01 1043 aaKnown RBP16.16■□□□□ 0.18
TOP3B-202ENST00000398793 CCDC8Q9H0W5 538 aaPredicted RBP16.16■□□□□ 0.18
TOP3B-202ENST00000398793 PTPRCP08575 1304 aa16.16■□□□□ 0.18
TOP3B-202ENST00000398793 DTNBO60941 627 aa16.15■□□□□ 0.18
TOP3B-202ENST00000398793 HYPKQ9NX55 129 aa16.15■□□□□ 0.18
TOP3B-202ENST00000398793 SPATA31A5Q5VU36 1347 aa16.15■□□□□ 0.18
TOP3B-202ENST00000398793 SPATA31A7Q8IWB4 1347 aa16.15■□□□□ 0.18
TOP3B-202ENST00000398793 ARHGAP45Q92619 1136 aa16.14■□□□□ 0.18
TOP3B-202ENST00000398793 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.14■□□□□ 0.18
TOP3B-202ENST00000398793 ADCY9O60503 1353 aa16.14■□□□□ 0.17
TOP3B-202ENST00000398793 SNAP23O00161 211 aa16.14■□□□□ 0.17
TOP3B-202ENST00000398793 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.14■□□□□ 0.174e-7■■■□□ 15.1
TOP3B-202ENST00000398793 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
TOP3B-202ENST00000398793 ITPK1Q13572 414 aa16.14■□□□□ 0.17
TOP3B-202ENST00000398793 GJD4Q96KN9 370 aaPredicted RBP16.14■□□□□ 0.17
TOP3B-202ENST00000398793 JCADQ9P266 1359 aa16.14■□□□□ 0.17
TOP3B-202ENST00000398793 OVOS2A0A0G2JMS6 1433 aa16.14■□□□□ 0.17
TOP3B-202ENST00000398793 LOC102724428A0A0B4J2F2 783 aa16.13■□□□□ 0.17
TOP3B-202ENST00000398793 SIK1P57059 783 aa16.13■□□□□ 0.17
TOP3B-202ENST00000398793 GZF1Q9H116 711 aaPredicted RBP16.13■□□□□ 0.17
TOP3B-202ENST00000398793 SLKQ9H2G2 1235 aaPredicted RBP16.13■□□□□ 0.17
TOP3B-202ENST00000398793 ERVV-2B6SEH9 535 aa16.13■□□□□ 0.17
TOP3B-202ENST00000398793 STARD3NLO95772 234 aa16.13■□□□□ 0.17
TOP3B-202ENST00000398793 GTF2E1P29083 439 aaPredicted RBP16.13■□□□□ 0.17
TOP3B-202ENST00000398793 SOS1Q07889 1333 aaPredicted RBP16.13■□□□□ 0.17
TOP3B-202ENST00000398793 SRP68Q9UHB9 627 aaKnown RBP16.12■□□□□ 0.17
TOP3B-202ENST00000398793 RGPD1P0DJD0 1748 aa16.12■□□□□ 0.17
TOP3B-202ENST00000398793 TPM2P07951 284 aa16.12■□□□□ 0.17
TOP3B-202ENST00000398793 PDIA4P13667 645 aaKnown RBP16.12■□□□□ 0.17
TOP3B-202ENST00000398793 LMBR1LQ6UX01 489 aa16.12■□□□□ 0.17
TOP3B-202ENST00000398793 HELBQ8NG08 1087 aaPredicted RBP16.12■□□□□ 0.17
TOP3B-202ENST00000398793 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
TOP3B-202ENST00000398793 GNAI3P08754 354 aa16.12■□□□□ 0.17
TOP3B-202ENST00000398793 NEUROD6Q96NK8 337 aa16.12■□□□□ 0.17
TOP3B-202ENST00000398793 PHLPP1O60346 1717 aa16.11■□□□□ 0.17
TOP3B-202ENST00000398793 GRM8O00222 908 aa16.11■□□□□ 0.17
TOP3B-202ENST00000398793 NOL8Q76FK4 1167 aaKnown RBP16.11■□□□□ 0.17
TOP3B-202ENST00000398793 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
TOP3B-202ENST00000398793 PHRF1Q9P1Y6 1649 aaKnown RBP16.11■□□□□ 0.17
TOP3B-202ENST00000398793 HEG1Q9ULI3 1381 aa16.11■□□□□ 0.17
TOP3B-202ENST00000398793 CRKLP46109 303 aaKnown RBP16.1■□□□□ 0.17
TOP3B-202ENST00000398793 ANKRD44Q8N8A2 993 aa16.1■□□□□ 0.17
TOP3B-202ENST00000398793 RGS12O14924 1447 aa16.1■□□□□ 0.17
TOP3B-202ENST00000398793 NEURL1BA8MQ27 555 aa16.1■□□□□ 0.17
TOP3B-202ENST00000398793 ESPNB1AK53 854 aa16.1■□□□□ 0.17
TOP3B-202ENST00000398793 TAOK2Q9UL54 1235 aa16.1■□□□□ 0.17
TOP3B-202ENST00000398793 GNPATO15228 680 aa16.1■□□□□ 0.17
TOP3B-202ENST00000398793 KIF6Q6ZMV9 814 aa16.1■□□□□ 0.17
TOP3B-202ENST00000398793 AMIGO3Q86WK7 504 aa16.1■□□□□ 0.17
TOP3B-202ENST00000398793 EDC3Q96F86 508 aaKnown RBP16.1■□□□□ 0.17
TOP3B-202ENST00000398793 TAF7LQ5H9L4 462 aa16.09■□□□□ 0.17
TOP3B-202ENST00000398793 TRMT112Q9UI30 125 aaKnown RBP16.09■□□□□ 0.17
TOP3B-202ENST00000398793 HMMRO75330 724 aa16.09■□□□□ 0.17
TOP3B-202ENST00000398793 C8orf34Q49A92 452 aa16.09■□□□□ 0.17
TOP3B-202ENST00000398793 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.17
TOP3B-202ENST00000398793 GCKRQ14397 625 aa16.08■□□□□ 0.16
TOP3B-202ENST00000398793 SLC51AQ86UW1 340 aa16.08■□□□□ 0.16
TOP3B-202ENST00000398793 CHGBP05060 677 aa16.08■□□□□ 0.16
TOP3B-202ENST00000398793 CCNL1Q9UK58 526 aaPredicted RBP16.08■□□□□ 0.16
TOP3B-202ENST00000398793 LINS1Q8NG48 757 aa16.07■□□□□ 0.16
TOP3B-202ENST00000398793 NUCB1Q02818 461 aa16.07■□□□□ 0.16
TOP3B-202ENST00000398793 PUS3Q9BZE2 481 aaKnown RBP16.07■□□□□ 0.16
TOP3B-202ENST00000398793 LRP6O75581 1613 aa16.06■□□□□ 0.16
TOP3B-202ENST00000398793 SMC5Q8IY18 1101 aa16.06■□□□□ 0.16
TOP3B-202ENST00000398793 METTL22Q9BUU2 404 aaPredicted RBP16.06■□□□□ 0.16
TOP3B-202ENST00000398793 TLR7Q9NYK1 1049 aaKnown RBP16.06■□□□□ 0.16
TOP3B-202ENST00000398793 HDAC1Q13547 482 aaPredicted RBP16.06■□□□□ 0.16
TOP3B-202ENST00000398793 MSL1Q68DK7 614 aa16.06■□□□□ 0.16
TOP3B-202ENST00000398793 IQSEC3Q9UPP2 1182 aaPredicted RBP16.06■□□□□ 0.16
TOP3B-202ENST00000398793 ERBB4Q15303 1308 aa16.06■□□□□ 0.16
TOP3B-202ENST00000398793 SLFNL1Q499Z3 407 aa16.05■□□□□ 0.16
TOP3B-202ENST00000398793 KAZALD1Q96I82 304 aa16.05■□□□□ 0.16
TOP3B-202ENST00000398793 SNRKQ9NRH2 765 aa16.05■□□□□ 0.16
TOP3B-202ENST00000398793 CYP19A1P11511 503 aaPredicted RBP16.05■□□□□ 0.16
TOP3B-202ENST00000398793 TIMM10P62072 90 aa16.05■□□□□ 0.16
TOP3B-202ENST00000398793 AACSQ86V21 672 aa16.05■□□□□ 0.16
TOP3B-202ENST00000398793 ARID3AQ99856 593 aa16.05■□□□□ 0.16
TOP3B-202ENST00000398793 LRRCC1Q9C099 1032 aa16.05■□□□□ 0.16
TOP3B-202ENST00000398793 NIP7Q9Y221 180 aaKnown RBP eCLIP16.05■□□□□ 0.16
TOP3B-202ENST00000398793 PALLDQ8WX93 1383 aa16.05■□□□□ 0.16
TOP3B-202ENST00000398793 VPS72Q15906 364 aa16.05■□□□□ 0.16
TOP3B-202ENST00000398793 BOLA2Q9H3K6 86 aa16.05■□□□□ 0.16
TOP3B-202ENST00000398793 ATP8B2P98198 1209 aa16.04■□□□□ 0.16
TOP3B-202ENST00000398793 G3BP1Q13283 466 aaKnown RBP eCLIP16.04■□□□□ 0.16
TOP3B-202ENST00000398793 KIAA1211Q6ZU35 1233 aa16.04■□□□□ 0.16
TOP3B-202ENST00000398793 RPAP2Q8IXW5 612 aaPredicted RBP16.04■□□□□ 0.16
TOP3B-202ENST00000398793 BBXQ8WY36 941 aaPredicted RBP16.04■□□□□ 0.16
TOP3B-202ENST00000398793 ZHX1Q9UKY1 873 aaPredicted RBP16.04■□□□□ 0.16
TOP3B-202ENST00000398793 TRPC5Q9UL62 973 aaPredicted RBP16.04■□□□□ 0.16
TOP3B-202ENST00000398793 LINC00116Q8NCU8 138 aa16.04■□□□□ 0.16
TOP3B-202ENST00000398793 TRIM44Q96DX7 344 aaPredicted RBP16.04■□□□□ 0.16
TOP3B-202ENST00000398793 DCTPP1Q9H773 170 aa16.04■□□□□ 0.16
TOP3B-202ENST00000398793 BCL9LQ86UU0 1499 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms