RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 METTL22Q9BUU2 404 aaPredicted RBP24.21■■□□□ 1.47
PDLIM2-204ENST00000397760 CCDC87Q9NVE4 849 aa24.21■■□□□ 1.47
PDLIM2-204ENST00000397760 BTAF1O14981 1849 aa24.21■■□□□ 1.47
PDLIM2-204ENST00000397760 TRIM37O94972 964 aa24.21■■□□□ 1.47
PDLIM2-204ENST00000397760 INTS5Q6P9B9 1019 aaKnown RBP24.21■■□□□ 1.47
PDLIM2-204ENST00000397760 LINS1Q8NG48 757 aa24.21■■□□□ 1.47
PDLIM2-204ENST00000397760 ALDH1L1O75891 902 aa24.2■■□□□ 1.46
PDLIM2-204ENST00000397760 GNAI3P08754 354 aa24.2■■□□□ 1.46
PDLIM2-204ENST00000397760 NEXNQ0ZGT2 675 aa24.2■■□□□ 1.46
PDLIM2-204ENST00000397760 USP44Q9H0E7 712 aa24.2■■□□□ 1.46
PDLIM2-204ENST00000397760 RWDD1Q9H446 243 aaPredicted RBP24.2■■□□□ 1.46
PDLIM2-204ENST00000397760 SBF2Q86WG5 1849 aa24.2■■□□□ 1.46
PDLIM2-204ENST00000397760 IL6STP40189 918 aaPredicted RBP24.19■■□□□ 1.46
PDLIM2-204ENST00000397760 KCNQ4P56696 695 aa24.19■■□□□ 1.46
PDLIM2-204ENST00000397760 MYD88Q99836 296 aa24.19■■□□□ 1.46
PDLIM2-204ENST00000397760 CWF19L2Q2TBE0 894 aaKnown RBP24.19■■□□□ 1.46
PDLIM2-204ENST00000397760 LINC00116Q8NCU8 138 aa24.18■■□□□ 1.46
PDLIM2-204ENST00000397760 ZBTB3Q9H5J0 574 aa24.18■■□□□ 1.46
PDLIM2-204ENST00000397760 CCNL1Q9UK58 526 aaPredicted RBP24.18■■□□□ 1.46
PDLIM2-204ENST00000397760 KIF6Q6ZMV9 814 aa24.17■■□□□ 1.46
PDLIM2-204ENST00000397760 NPM2Q86SE8 214 aaKnown RBP24.17■■□□□ 1.46
PDLIM2-204ENST00000397760 ARXQ96QS3 562 aa24.17■■□□□ 1.46
PDLIM2-204ENST00000397760 IGKV5-2P06315 115 aa24.17■■□□□ 1.46
PDLIM2-204ENST00000397760 HDAC1Q13547 482 aaPredicted RBP24.17■■□□□ 1.46
PDLIM2-204ENST00000397760 CICQ96RK0 1608 aaPredicted RBP24.16■■□□□ 1.46
PDLIM2-204ENST00000397760 GNAI2P04899 355 aa24.16■■□□□ 1.46
PDLIM2-204ENST00000397760 UBTFL1P0CB47 393 aaPredicted RBP24.15■■□□□ 1.46
PDLIM2-204ENST00000397760 EIF5P55010 431 aaKnown RBP24.15■■□□□ 1.46
PDLIM2-204ENST00000397760 ZNF831Q5JPB2 1677 aa24.15■■□□□ 1.46
PDLIM2-204ENST00000397760 NEURL1BA8MQ27 555 aa24.14■■□□□ 1.46
PDLIM2-204ENST00000397760 FAM161AQ3B820 660 aa24.14■■□□□ 1.46
PDLIM2-204ENST00000397760 N4BP2Q86UW6 1770 aaPredicted RBP24.14■■□□□ 1.46
PDLIM2-204ENST00000397760 C9orf78Q9NZ63 289 aaPredicted RBP24.14■■□□□ 1.45
PDLIM2-204ENST00000397760 NBPF7P0C2Y1 421 aaPredicted RBP24.13■■□□□ 1.45
PDLIM2-204ENST00000397760 MAP3K15Q6ZN16 1313 aa24.13■■□□□ 1.45
PDLIM2-204ENST00000397760 ATP5J2-PTCD1G3V325 749 aa24.12■■□□□ 1.45
PDLIM2-204ENST00000397760 SIRT2Q8IXJ6 389 aa24.12■■□□□ 1.45
PDLIM2-204ENST00000397760 RPAP2Q8IXW5 612 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-204ENST00000397760 CNTNAP4Q9C0A0 1308 aa24.12■■□□□ 1.45
PDLIM2-204ENST00000397760 CEP85Q6P2H3 762 aa24.12■■□□□ 1.45
PDLIM2-204ENST00000397760 DZIP3Q86Y13 1208 aaKnown RBP24.12■■□□□ 1.45
PDLIM2-204ENST00000397760 GCKRQ14397 625 aa24.11■■□□□ 1.45
PDLIM2-204ENST00000397760 RC3H1Q5TC82 1133 aaKnown RBP24.11■■□□□ 1.45
PDLIM2-204ENST00000397760 ILDR1Q86SU0 546 aaPredicted RBP24.11■■□□□ 1.45
PDLIM2-204ENST00000397760 ANKRD44Q8N8A2 993 aa24.11■■□□□ 1.45
PDLIM2-204ENST00000397760 TBC1D2BQ9UPU7 963 aa24.11■■□□□ 1.45
PDLIM2-204ENST00000397760 LRRFIP2Q9Y608 721 aaKnown RBP24.11■■□□□ 1.45
PDLIM2-204ENST00000397760 IBTKQ9P2D0 1353 aaPredicted RBP24.11■■□□□ 1.45
PDLIM2-204ENST00000397760 GRM8O00222 908 aa24.1■■□□□ 1.45
PDLIM2-204ENST00000397760 TCIRG1Q13488 830 aa24.1■■□□□ 1.45
PDLIM2-204ENST00000397760 ERVV-1B6SEH8 477 aa24.09■■□□□ 1.45
PDLIM2-204ENST00000397760 GIGYF2Q6Y7W6 1299 aaKnown RBP24.09■■□□□ 1.45
PDLIM2-204ENST00000397760 ARFGEF2Q9Y6D5 1785 aa24.09■■□□□ 1.45
PDLIM2-204ENST00000397760 UTYO14607 1347 aa24.09■■□□□ 1.45
PDLIM2-204ENST00000397760 COL5A3P25940 1745 aaPredicted RBP24.08■■□□□ 1.45
PDLIM2-204ENST00000397760 HLFQ16534 295 aa24.08■■□□□ 1.45
PDLIM2-204ENST00000397760 RTL5Q5HYW3 569 aaPredicted RBP24.08■■□□□ 1.45
PDLIM2-204ENST00000397760 LRRC4BQ9NT99 713 aa24.08■■□□□ 1.45
PDLIM2-204ENST00000397760 HDAC5Q9UQL6 1122 aa24.08■■□□□ 1.45
PDLIM2-204ENST00000397760 RREB1Q92766 1687 aa24.08■■□□□ 1.45
PDLIM2-204ENST00000397760 LY75O60449 1722 aa24.08■■□□□ 1.45
PDLIM2-204ENST00000397760 SLC27A3Q5K4L6 730 aa24.07■■□□□ 1.44
PDLIM2-204ENST00000397760 EP400Q96L91 3159 aa24.07■■□□□ 1.44
PDLIM2-204ENST00000397760 MYH14Q7Z406 1995 aaKnown RBP24.06■■□□□ 1.44
PDLIM2-204ENST00000397760 APBA3O96018 575 aa24.06■■□□□ 1.44
PDLIM2-204ENST00000397760 CCDC191Q8NCU4 936 aa24.06■■□□□ 1.44
PDLIM2-204ENST00000397760 ISCA1Q9BUE6 129 aa24.06■■□□□ 1.44
PDLIM2-204ENST00000397760 CWC25Q9NXE8 425 aaPredicted RBP24.06■■□□□ 1.44
PDLIM2-204ENST00000397760 COL15A1P39059 1388 aa24.06■■□□□ 1.44
PDLIM2-204ENST00000397760 NUP188Q5SRE5 1749 aa24.06■■□□□ 1.44
PDLIM2-204ENST00000397760 A0A087WZG4 1122 aa24.05■■□□□ 1.44
PDLIM2-204ENST00000397760 RPS6KA4O75676 772 aa24.05■■□□□ 1.44
PDLIM2-204ENST00000397760 ATP8B2P98198 1209 aa24.05■■□□□ 1.44
PDLIM2-204ENST00000397760 C8orf34Q49A92 452 aa24.05■■□□□ 1.44
PDLIM2-204ENST00000397760 HSP90AB3PQ58FF7 597 aa24.05■■□□□ 1.44
PDLIM2-204ENST00000397760 NBR1Q14596 966 aa24.05■■□□□ 1.44
PDLIM2-204ENST00000397760 PLSCR1O15162 318 aa24.04■■□□□ 1.44
PDLIM2-204ENST00000397760 GNPATO15228 680 aa24.04■■□□□ 1.44
PDLIM2-204ENST00000397760 HMMRO75330 724 aa24.04■■□□□ 1.44
PDLIM2-204ENST00000397760 TRIM28Q13263 835 aaKnown RBP24.04■■□□□ 1.44
PDLIM2-204ENST00000397760 SMC5Q8IY18 1101 aa24.04■■□□□ 1.44
PDLIM2-204ENST00000397760 CAMTA2O94983 1202 aa24.03■■□□□ 1.44
PDLIM2-204ENST00000397760 DEKP35659 375 aaKnown RBP24.03■■□□□ 1.44
PDLIM2-204ENST00000397760 SUCLG2Q96I99 432 aa24.03■■□□□ 1.44
PDLIM2-204ENST00000397760 TXNRD1Q16881 649 aa24.03■■□□□ 1.44
PDLIM2-204ENST00000397760 RTCBQ9Y3I0 505 aaKnown RBP24.03■■□□□ 1.44
PDLIM2-204ENST00000397760 UBE3BQ7Z3V4 1068 aa24.02■■□□□ 1.44
PDLIM2-204ENST00000397760 PROM2Q8N271 834 aa24.02■■□□□ 1.44
PDLIM2-204ENST00000397760 JARID2Q92833 1246 aaPredicted RBP24.02■■□□□ 1.44
PDLIM2-204ENST00000397760 GCC1Q96CN9 775 aa24.02■■□□□ 1.44
PDLIM2-204ENST00000397760 AK7Q96M32 723 aa24.02■■□□□ 1.44
PDLIM2-204ENST00000397760 PNMA6EA0A0J9YXQ4 647 aa24.01■■□□□ 1.43
PDLIM2-204ENST00000397760 H7C1W4 665 aa24.01■■□□□ 1.43
PDLIM2-204ENST00000397760 SMIM5Q71RC9 77 aa24.01■■□□□ 1.43
PDLIM2-204ENST00000397760 GPTP24298 496 aa24■■□□□ 1.43
PDLIM2-204ENST00000397760 SKAP1Q86WV1 359 aa24■■□□□ 1.43
PDLIM2-204ENST00000397760 KAZALD1Q96I82 304 aa24■■□□□ 1.43
PDLIM2-204ENST00000397760 DCTPP1Q9H773 170 aa24■■□□□ 1.43
PDLIM2-204ENST00000397760 CASP7P55210 303 aa24■■□□□ 1.43
PDLIM2-204ENST00000397760 PPP1R42Q7Z4L9 355 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms