RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 CAMTA2O94983 1202 aa18.23■□□□□ 0.51
SEC13-205ENST00000397101 POTEIP0CG38 1075 aa18.23■□□□□ 0.51
SEC13-205ENST00000397101 POTEJP0CG39 1038 aa18.23■□□□□ 0.51
SEC13-205ENST00000397101 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
SEC13-205ENST00000397101 TBC1D2BQ9UPU7 963 aa18.23■□□□□ 0.51
SEC13-205ENST00000397101 SCN4AP35499 1836 aa18.22■□□□□ 0.51
SEC13-205ENST00000397101 CTCFP49711 727 aaPredicted RBP18.22■□□□□ 0.51
SEC13-205ENST00000397101 TEFQ10587 303 aa18.22■□□□□ 0.51
SEC13-205ENST00000397101 NPM2Q86SE8 214 aaKnown RBP18.22■□□□□ 0.51
SEC13-205ENST00000397101 C7orf43Q8WVR3 580 aa18.22■□□□□ 0.51
SEC13-205ENST00000397101 TAF1DQ9H5J8 278 aaPredicted RBP18.22■□□□□ 0.51
SEC13-205ENST00000397101 TMEM88BA6NKF7 163 aa18.21■□□□□ 0.51
SEC13-205ENST00000397101 CLEC4GQ6UXB4 293 aa18.21■□□□□ 0.51
SEC13-205ENST00000397101 IL17REQ8NFR9 667 aa18.21■□□□□ 0.51
SEC13-205ENST00000397101 GAS2L2Q8NHY3 880 aa18.21■□□□□ 0.51
SEC13-205ENST00000397101 FMNL2Q96PY5 1086 aa18.21■□□□□ 0.51
SEC13-205ENST00000397101 ZNF219Q9P2Y4 722 aaPredicted RBP18.21■□□□□ 0.51
SEC13-205ENST00000397101 ARFGEF2Q9Y6D5 1785 aa18.21■□□□□ 0.51
SEC13-205ENST00000397101 KLRG2A4D1S0 409 aaPredicted RBP18.2■□□□□ 0.5
SEC13-205ENST00000397101 GNAT3A8MTJ3 354 aa18.2■□□□□ 0.5
SEC13-205ENST00000397101 RGL2O15211 777 aa18.2■□□□□ 0.5
SEC13-205ENST00000397101 ITGBL1O95965 494 aaPredicted RBP18.2■□□□□ 0.5
SEC13-205ENST00000397101 CCDC93Q567U6 631 aa18.2■□□□□ 0.5
SEC13-205ENST00000397101 AIDAQ96BJ3 306 aa18.2■□□□□ 0.5
SEC13-205ENST00000397101 SLX4Q8IY92 1834 aa18.2■□□□□ 0.5
SEC13-205ENST00000397101 CCDC24Q8N4L8 307 aa18.19■□□□□ 0.5
SEC13-205ENST00000397101 WBP1LQ9NX94 342 aa18.19■□□□□ 0.5
SEC13-205ENST00000397101 CEMIPQ8WUJ3 1361 aa18.18■□□□□ 0.5
SEC13-205ENST00000397101 NPHP1O15259 732 aa18.18■□□□□ 0.5
SEC13-205ENST00000397101 VEGFBP49765 207 aa18.18■□□□□ 0.5
SEC13-205ENST00000397101 RASSF10A6NK89 507 aa18.17■□□□□ 0.5
SEC13-205ENST00000397101 A1BGP04217 495 aa18.17■□□□□ 0.5
SEC13-205ENST00000397101 NPR1P16066 1061 aa18.17■□□□□ 0.5
SEC13-205ENST00000397101 FKBP4Q02790 459 aaKnown RBP eCLIP18.17■□□□□ 0.5
SEC13-205ENST00000397101 DZIP3Q86Y13 1208 aaKnown RBP18.17■□□□□ 0.5
SEC13-205ENST00000397101 ZNF330Q9Y3S2 320 aaPredicted RBP18.17■□□□□ 0.5
SEC13-205ENST00000397101 SIPA1L3O60292 1781 aaPredicted RBP18.17■□□□□ 0.5
SEC13-205ENST00000397101 RALBP1Q15311 655 aa18.16■□□□□ 0.5
SEC13-205ENST00000397101 PNMA8AQ86V59 439 aaPredicted RBP18.16■□□□□ 0.5
SEC13-205ENST00000397101 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
SEC13-205ENST00000397101 HACL1Q9UJ83 578 aa18.16■□□□□ 0.5
SEC13-205ENST00000397101 BCORQ6W2J9 1755 aa18.16■□□□□ 0.5
SEC13-205ENST00000397101 MIER1Q8N108 512 aa18.15■□□□□ 0.5
SEC13-205ENST00000397101 PRKRIP1Q9H875 184 aaPredicted RBP18.15■□□□□ 0.5
SEC13-205ENST00000397101 ZNF652Q9Y2D9 606 aa18.15■□□□□ 0.5
SEC13-205ENST00000397101 ADAMTSL1Q8N6G6 1762 aa18.14■□□□□ 0.5
SEC13-205ENST00000397101 COL3A1P02461 1466 aaPredicted RBP18.14■□□□□ 0.5
SEC13-205ENST00000397101 FZD9O00144 591 aa18.14■□□□□ 0.49
SEC13-205ENST00000397101 NBPF5PQ86XG9 351 aaPredicted RBP18.14■□□□□ 0.49
SEC13-205ENST00000397101 EPHX2P34913 555 aa18.13■□□□□ 0.49
SEC13-205ENST00000397101 MAP2K1Q02750 393 aaPredicted RBP18.13■□□□□ 0.49
SEC13-205ENST00000397101 TPTE2Q6XPS3 522 aa18.13■□□□□ 0.49
SEC13-205ENST00000397101 ZNF541Q9H0D2 1346 aa18.13■□□□□ 0.49
SEC13-205ENST00000397101 NPC1L1Q9UHC9 1359 aa18.13■□□□□ 0.49
SEC13-205ENST00000397101 BTBD11A6QL63 1104 aa18.12■□□□□ 0.49
SEC13-205ENST00000397101 ALDH1B1P30837 517 aa18.12■□□□□ 0.49
SEC13-205ENST00000397101 DEFB115Q30KQ5 88 aa18.12■□□□□ 0.49
SEC13-205ENST00000397101 SLC34A2O95436 690 aa18.11■□□□□ 0.49
SEC13-205ENST00000397101 LBX1P52954 281 aa18.11■□□□□ 0.49
SEC13-205ENST00000397101 EAPPQ56P03 285 aaPredicted RBP18.11■□□□□ 0.49
SEC13-205ENST00000397101 CNTROBQ8N137 903 aa18.11■□□□□ 0.49
SEC13-205ENST00000397101 GPC2Q8N158 579 aa18.11■□□□□ 0.49
SEC13-205ENST00000397101 ZNF277Q9NRM2 450 aaPredicted RBP18.11■□□□□ 0.49
SEC13-205ENST00000397101 USP16Q9Y5T5 823 aa18.11■□□□□ 0.49
SEC13-205ENST00000397101 CACNA1SQ13698 1873 aa18.1■□□□□ 0.49
SEC13-205ENST00000397101 SNRPA1P09661 255 aaKnown RBP18.1■□□□□ 0.49
SEC13-205ENST00000397101 HSPA8P11142 646 aaKnown RBP18.1■□□□□ 0.49
SEC13-205ENST00000397101 IARSP41252 1262 aaKnown RBP18.1■□□□□ 0.49
SEC13-205ENST00000397101 PSMD1Q99460 953 aa18.1■□□□□ 0.49
SEC13-205ENST00000397101 CLEC11AQ9Y240 323 aa18.1■□□□□ 0.49
SEC13-205ENST00000397101 SNED1Q8TER0 1413 aa18.09■□□□□ 0.49
SEC13-205ENST00000397101 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
SEC13-205ENST00000397101 KCNQ3O43525 872 aa18.09■□□□□ 0.49
SEC13-205ENST00000397101 RNF123Q5XPI4 1314 aa18.08■□□□□ 0.49
SEC13-205ENST00000397101 MYBBP1AQ9BQG0 1328 aaKnown RBP18.08■□□□□ 0.49
SEC13-205ENST00000397101 WDR33Q9C0J8 1336 aaKnown RBP18.08■□□□□ 0.49
SEC13-205ENST00000397101 CC2D2BQ6DHV5 1058 aa18.08■□□□□ 0.48
SEC13-205ENST00000397101 SYNE4Q8N205 404 aa18.08■□□□□ 0.48
SEC13-205ENST00000397101 GRIPAP1Q4V328 841 aa18.07■□□□□ 0.48
SEC13-205ENST00000397101 ABHD8Q96I13 439 aa18.07■□□□□ 0.48
SEC13-205ENST00000397101 NIP7Q9Y221 180 aaKnown RBP eCLIP18.07■□□□□ 0.48
SEC13-205ENST00000397101 CRY2Q49AN0 593 aa18.06■□□□□ 0.48
SEC13-205ENST00000397101 MAP1SQ66K74 1059 aaPredicted RBP18.06■□□□□ 0.48
SEC13-205ENST00000397101 JDP2Q8WYK2 163 aa18.06■□□□□ 0.48
SEC13-205ENST00000397101 DDX21Q9NR30 783 aaKnown RBP eCLIP18.06■□□□□ 0.483e-7■■■□□ 17.1
SEC13-205ENST00000397101 PPP2R1AP30153 589 aa18.05■□□□□ 0.48
SEC13-205ENST00000397101 RSPH6AQ9H0K4 717 aa18.05■□□□□ 0.48
SEC13-205ENST00000397101 PRAMEF22A3QJZ6 481 aa18.04■□□□□ 0.48
SEC13-205ENST00000397101 NBPF26B4DH59 902 aa18.04■□□□□ 0.48
SEC13-205ENST00000397101 ECE1P42892 770 aa18.04■□□□□ 0.48
SEC13-205ENST00000397101 NBPF10Q6P3W6 841 aaKnown RBP18.04■□□□□ 0.48
SEC13-205ENST00000397101 OLFM4Q6UX06 510 aa18.04■□□□□ 0.48
SEC13-205ENST00000397101 NBPF15Q8N660 670 aa18.04■□□□□ 0.48
SEC13-205ENST00000397101 PHACTR3Q96KR7 559 aa18.04■□□□□ 0.48
SEC13-205ENST00000397101 ABT1Q9ULW3 272 aaKnown RBP18.04■□□□□ 0.48
SEC13-205ENST00000397101 THSD7BQ9C0I4 1608 aa18.04■□□□□ 0.48
SEC13-205ENST00000397101 PRKAR2BP31323 418 aa18.03■□□□□ 0.48
SEC13-205ENST00000397101 PIP4K2AP48426 406 aaPredicted RBP18.03■□□□□ 0.48
SEC13-205ENST00000397101 RGS19P49795 217 aa18.03■□□□□ 0.48
SEC13-205ENST00000397101 EIF6P56537 245 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms