RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 SOGA3Q5TF21 947 aa29.34■■■□□ 2.29
PARD6B-202ENST00000396039 SMC1BQ8NDV3 1235 aa29.34■■■□□ 2.29
PARD6B-202ENST00000396039 NFKBIEO00221 500 aa29.33■■■□□ 2.29
PARD6B-202ENST00000396039 TAF7Q15545 349 aaPredicted RBP29.33■■■□□ 2.29
PARD6B-202ENST00000396039 STYK1Q6J9G0 422 aa29.33■■■□□ 2.29
PARD6B-202ENST00000396039 KDM3BQ7LBC6 1761 aa29.32■■■□□ 2.28
PARD6B-202ENST00000396039 VEGFAP15692 232 aaPredicted RBP29.32■■■□□ 2.28
PARD6B-202ENST00000396039 IFFO2Q5TF58 517 aa29.32■■■□□ 2.28
PARD6B-202ENST00000396039 PNISRQ8TF01 805 aaKnown RBP29.32■■■□□ 2.28
PARD6B-202ENST00000396039 LTBP3Q9NS15 1303 aa29.31■■■□□ 2.28
PARD6B-202ENST00000396039 DPY19L2Q6NUT2 758 aa29.31■■■□□ 2.28
PARD6B-202ENST00000396039 PNNQ9H307 717 aaKnown RBP29.31■■■□□ 2.28
PARD6B-202ENST00000396039 NBPF5PQ86XG9 351 aaPredicted RBP29.3■■■□□ 2.28
PARD6B-202ENST00000396039 MASTLQ96GX5 879 aa29.3■■■□□ 2.28
PARD6B-202ENST00000396039 SLX4Q8IY92 1834 aa29.29■■■□□ 2.28
PARD6B-202ENST00000396039 C21orf2O43822 256 aa29.29■■■□□ 2.28
PARD6B-202ENST00000396039 DCTN1Q14203 1278 aa29.29■■■□□ 2.28
PARD6B-202ENST00000396039 SRGNP10124 158 aa29.28■■■□□ 2.28
PARD6B-202ENST00000396039 DNAJC5GQ8N7S2 189 aa29.28■■■□□ 2.28
PARD6B-202ENST00000396039 PRAMEF22A3QJZ6 481 aa29.27■■■□□ 2.28
PARD6B-202ENST00000396039 PRELPP51888 382 aa29.27■■■□□ 2.28
PARD6B-202ENST00000396039 CCDC24Q8N4L8 307 aa29.27■■■□□ 2.28
PARD6B-202ENST00000396039 TAOK3Q9H2K8 898 aa29.27■■■□□ 2.28
PARD6B-202ENST00000396039 PIP4K2AP48426 406 aaPredicted RBP29.26■■■□□ 2.27
PARD6B-202ENST00000396039 TPTE2Q6XPS3 522 aa29.26■■■□□ 2.27
PARD6B-202ENST00000396039 ERFEQ4G0M1 354 aa29.25■■■□□ 2.27
PARD6B-202ENST00000396039 PRPF40BQ6NWY9 871 aaKnown RBP29.25■■■□□ 2.27
PARD6B-202ENST00000396039 NIP7Q9Y221 180 aaKnown RBP eCLIP29.24■■■□□ 2.27
PARD6B-202ENST00000396039 NPR1P16066 1061 aa29.23■■■□□ 2.27
PARD6B-202ENST00000396039 ZNF219Q9P2Y4 722 aaPredicted RBP29.23■■■□□ 2.27
PARD6B-202ENST00000396039 MAPK8IP3Q9UPT6 1336 aa29.22■■■□□ 2.27
PARD6B-202ENST00000396039 NBPF26B4DH59 902 aa29.22■■■□□ 2.27
PARD6B-202ENST00000396039 NBPF10Q6P3W6 841 aaKnown RBP29.22■■■□□ 2.27
PARD6B-202ENST00000396039 NBPF15Q8N660 670 aa29.22■■■□□ 2.27
PARD6B-202ENST00000396039 KLRG1Q96E93 195 aa29.22■■■□□ 2.27
PARD6B-202ENST00000396039 NUP98P52948 1817 aa29.22■■■□□ 2.27
PARD6B-202ENST00000396039 NFE2L2Q16236 605 aa29.2■■■□□ 2.26
PARD6B-202ENST00000396039 KLRG2A4D1S0 409 aaPredicted RBP29.19■■■□□ 2.26
PARD6B-202ENST00000396039 CCDC93Q567U6 631 aa29.19■■■□□ 2.26
PARD6B-202ENST00000396039 PLEKHF1Q96S99 279 aa29.19■■■□□ 2.26
PARD6B-202ENST00000396039 ERVV-1B6SEH8 477 aa29.17■■■□□ 2.26
PARD6B-202ENST00000396039 GTF2E1P29083 439 aaPredicted RBP29.17■■■□□ 2.26
PARD6B-202ENST00000396039 NYXQ9GZU5 481 aa29.17■■■□□ 2.26
PARD6B-202ENST00000396039 MIS18AQ9NYP9 233 aa29.16■■■□□ 2.26
PARD6B-202ENST00000396039 SCN4AP35499 1836 aa29.15■■■□□ 2.26
PARD6B-202ENST00000396039 ALDH1B1P30837 517 aa29.15■■■□□ 2.26
PARD6B-202ENST00000396039 KIF6Q6ZMV9 814 aa29.15■■■□□ 2.26
PARD6B-202ENST00000396039 JMYQ8N9B5 988 aa29.15■■■□□ 2.26
PARD6B-202ENST00000396039 EIF4A1P60842 406 aaKnown RBP29.14■■■□□ 2.26
PARD6B-202ENST00000396039 ERBB4Q15303 1308 aa29.14■■■□□ 2.25
PARD6B-202ENST00000396039 C7orf43Q8WVR3 580 aa29.13■■■□□ 2.25
PARD6B-202ENST00000396039 MAP3K15Q6ZN16 1313 aa29.13■■■□□ 2.25
PARD6B-202ENST00000396039 IBTKQ9P2D0 1353 aaPredicted RBP29.13■■■□□ 2.25
PARD6B-202ENST00000396039 HLFQ16534 295 aa29.12■■■□□ 2.25
PARD6B-202ENST00000396039 RTKN2Q8IZC4 609 aa29.12■■■□□ 2.25
PARD6B-202ENST00000396039 IQCA1LA6NCM1 817 aa29.11■■■□□ 2.25
PARD6B-202ENST00000396039 POTECB2RU33 542 aa29.11■■■□□ 2.25
PARD6B-202ENST00000396039 HTRA3P83110 453 aa29.11■■■□□ 2.25
PARD6B-202ENST00000396039 FKBP4Q02790 459 aaKnown RBP eCLIP29.11■■■□□ 2.25
PARD6B-202ENST00000396039 RALBP1Q15311 655 aa29.11■■■□□ 2.25
PARD6B-202ENST00000396039 RIC1Q4ADV7 1423 aa29.11■■■□□ 2.25
PARD6B-202ENST00000396039 FAM177BA6PVY3 158 aa29.09■■■□□ 2.25
PARD6B-202ENST00000396039 LMOD3Q0VAK6 560 aa29.08■■■□□ 2.25
PARD6B-202ENST00000396039 BABAM1Q9NWV8 329 aa29.08■■■□□ 2.25
PARD6B-202ENST00000396039 RRP7AQ9Y3A4 280 aaKnown RBP29.08■■■□□ 2.25
PARD6B-202ENST00000396039 NGEFQ8N5V2 710 aa29.07■■■□□ 2.24
PARD6B-202ENST00000396039 TSPYL4Q9UJ04 414 aa29.07■■■□□ 2.24
PARD6B-202ENST00000396039 DDNO94850 711 aaPredicted RBP29.06■■■□□ 2.24
PARD6B-202ENST00000396039 CRY2Q49AN0 593 aa29.06■■■□□ 2.24
PARD6B-202ENST00000396039 THUMPD2Q9BTF0 503 aaKnown RBP29.06■■■□□ 2.24
PARD6B-202ENST00000396039 MYL6BP14649 208 aa29.05■■■□□ 2.24
PARD6B-202ENST00000396039 GRIPAP1Q4V328 841 aa29.05■■■□□ 2.24
PARD6B-202ENST00000396039 CC2D2BQ6DHV5 1058 aa29.05■■■□□ 2.24
PARD6B-202ENST00000396039 CHADLQ6NUI6 762 aa29.05■■■□□ 2.24
PARD6B-202ENST00000396039 L3MBTL3Q96JM7 780 aaPredicted RBP29.05■■■□□ 2.24
PARD6B-202ENST00000396039 RPGRQ92834 1020 aaKnown RBP29.03■■■□□ 2.24
PARD6B-202ENST00000396039 ABCC12Q96J65 1359 aa29.02■■■□□ 2.24
PARD6B-202ENST00000396039 RIPK4P57078 832 aa29.02■■■□□ 2.24
PARD6B-202ENST00000396039 TTLL7Q6ZT98 887 aa29.02■■■□□ 2.24
PARD6B-202ENST00000396039 PARP10Q53GL7 1025 aa29.01■■■□□ 2.23
PARD6B-202ENST00000396039 GIGYF2Q6Y7W6 1299 aaKnown RBP29.01■■■□□ 2.23
PARD6B-202ENST00000396039 PPP1R42Q7Z4L9 355 aa29.01■■■□□ 2.23
PARD6B-202ENST00000396039 PSMD1Q99460 953 aa29.01■■■□□ 2.23
PARD6B-202ENST00000396039 ZBTB3Q9H5J0 574 aa29.01■■■□□ 2.23
PARD6B-202ENST00000396039 ZNF277Q9NRM2 450 aaPredicted RBP29.01■■■□□ 2.23
PARD6B-202ENST00000396039 ANKRD36CQ5JPF3 1778 aa29.01■■■□□ 2.23
PARD6B-202ENST00000396039 IARSP41252 1262 aaKnown RBP29■■■□□ 2.23
PARD6B-202ENST00000396039 LDHDQ86WU2 507 aa29■■■□□ 2.23
PARD6B-202ENST00000396039 NUTM1Q86Y26 1132 aa29■■■□□ 2.23
PARD6B-202ENST00000396039 ZNF34Q8IZ26 560 aa28.99■■■□□ 2.23
PARD6B-202ENST00000396039 UBN2Q6ZU65 1347 aa28.98■■■□□ 2.23
PARD6B-202ENST00000396039 GPTP24298 496 aa28.98■■■□□ 2.23
PARD6B-202ENST00000396039 HOXA10P31260 410 aaPredicted RBP28.98■■■□□ 2.23
PARD6B-202ENST00000396039 JDP2Q8WYK2 163 aa28.98■■■□□ 2.23
PARD6B-202ENST00000396039 CREBZFQ9NS37 354 aa28.98■■■□□ 2.23
PARD6B-202ENST00000396039 RNF123Q5XPI4 1314 aa28.97■■■□□ 2.23
PARD6B-202ENST00000396039 MYBBP1AQ9BQG0 1328 aaKnown RBP28.97■■■□□ 2.23
PARD6B-202ENST00000396039 SYNE4Q8N205 404 aa28.97■■■□□ 2.23
PARD6B-202ENST00000396039 RBM17Q96I25 401 aaKnown RBP28.97■■■□□ 2.23
PARD6B-202ENST00000396039 TAF1DQ9H5J8 278 aaPredicted RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms