RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 KIF18AQ8NI77 898 aa10.67□□□□□ -0.7
MSH5-205ENST00000395853 CABP2Q9NPB3 220 aa10.67□□□□□ -0.7
MSH5-205ENST00000395853 BTG4Q9NY30 223 aa10.67□□□□□ -0.7
MSH5-205ENST00000395853 POLKQ9UBT6 870 aa10.67□□□□□ -0.7
MSH5-205ENST00000395853 A0A0G2JS52 829 aa10.67□□□□□ -0.7
MSH5-205ENST00000395853 ATP6V1AP38606 617 aa10.67□□□□□ -0.7
MSH5-205ENST00000395853 TRDNQ13061 729 aa10.67□□□□□ -0.7
MSH5-205ENST00000395853 PPP2R5AQ15172 486 aa10.67□□□□□ -0.7
MSH5-205ENST00000395853 SYCP1Q15431 976 aa10.67□□□□□ -0.7
MSH5-205ENST00000395853 ZC3H12AQ5D1E8 599 aaKnown RBP10.67□□□□□ -0.7
MSH5-205ENST00000395853 SWT1Q5T5J6 900 aaKnown RBP10.67□□□□□ -0.7
MSH5-205ENST00000395853 NBPF3Q9H094 633 aa10.67□□□□□ -0.7
MSH5-205ENST00000395853 RBSNQ9H1K0 784 aa10.67□□□□□ -0.7
MSH5-205ENST00000395853 RIOK3O14730 519 aaKnown RBP10.66□□□□□ -0.7
MSH5-205ENST00000395853 LMOD2Q6P5Q4 547 aa10.66□□□□□ -0.7
MSH5-205ENST00000395853 DDX49Q9Y6V7 483 aaKnown RBP10.66□□□□□ -0.7
MSH5-205ENST00000395853 EVC2Q86UK5 1308 aa10.66□□□□□ -0.7
MSH5-205ENST00000395853 A0A1B0GUL7 405 aa10.66□□□□□ -0.7
MSH5-205ENST00000395853 LIG1P18858 919 aa10.66□□□□□ -0.7
MSH5-205ENST00000395853 C11orf91Q3C1V1 193 aa10.66□□□□□ -0.7
MSH5-205ENST00000395853 RPAINQ86UA6 219 aa10.66□□□□□ -0.7
MSH5-205ENST00000395853 CCDC146Q8IYE0 955 aa10.66□□□□□ -0.7
MSH5-205ENST00000395853 CRYBG1Q9Y4K1 1723 aa10.66□□□□□ -0.7
MSH5-205ENST00000395853 TRIM66O15016 1216 aa10.65□□□□□ -0.7
MSH5-205ENST00000395853 NCBP1Q09161 790 aaKnown RBP10.65□□□□□ -0.7
MSH5-205ENST00000395853 CCDC96Q2M329 555 aa10.65□□□□□ -0.7
MSH5-205ENST00000395853 SYT10Q6XYQ8 523 aa10.65□□□□□ -0.7
MSH5-205ENST00000395853 FAM196AQ6ZSG2 479 aa10.65□□□□□ -0.7
MSH5-205ENST00000395853 FAM210AQ96ND0 272 aa10.65□□□□□ -0.7
MSH5-205ENST00000395853 PRAM1Q96QH2 718 aa10.65□□□□□ -0.7
MSH5-205ENST00000395853 CIZ1Q9ULV3 898 aaPredicted RBP10.65□□□□□ -0.7
MSH5-205ENST00000395853 IPO8O15397 1037 aaKnown RBP10.65□□□□□ -0.7
MSH5-205ENST00000395853 CT47B1P0C2W7 299 aaPredicted RBP10.65□□□□□ -0.7
MSH5-205ENST00000395853 MTA1Q13330 715 aa10.65□□□□□ -0.7
MSH5-205ENST00000395853 R3HDM1Q15032 1099 aaKnown RBP10.65□□□□□ -0.7
MSH5-205ENST00000395853 CAMKK2Q96RR4 588 aa10.65□□□□□ -0.7
MSH5-205ENST00000395853 SPTLC3Q9NUV7 552 aa10.64□□□□□ -0.71
MSH5-205ENST00000395853 ZNF446Q9NWS9 450 aa10.64□□□□□ -0.71
MSH5-205ENST00000395853 SRCAPQ6ZRS2 3230 aa10.64□□□□□ -0.71
MSH5-205ENST00000395853 H0YHG0 523 aa10.64□□□□□ -0.71
MSH5-205ENST00000395853 DDIT3P35638 169 aa10.64□□□□□ -0.71
MSH5-205ENST00000395853 SARNPP82979 210 aaKnown RBP10.64□□□□□ -0.71
MSH5-205ENST00000395853 TSGA10IPQ3SY00 556 aa10.64□□□□□ -0.71
MSH5-205ENST00000395853 MORC1Q86VD1 984 aa10.64□□□□□ -0.71
MSH5-205ENST00000395853 PAIP2Q9BPZ3 127 aaKnown RBP10.64□□□□□ -0.71
MSH5-205ENST00000395853 MINK1Q8N4C8 1332 aaPredicted RBP10.64□□□□□ -0.71
MSH5-205ENST00000395853 MAPK8IP3Q9UPT6 1336 aa10.63□□□□□ -0.71
MSH5-205ENST00000395853 MAP2K2P36507 400 aa10.63□□□□□ -0.71
MSH5-205ENST00000395853 RAB3GAP1Q15042 981 aa10.63□□□□□ -0.71
MSH5-205ENST00000395853 TTC31Q49AM3 519 aaPredicted RBP10.63□□□□□ -0.71
MSH5-205ENST00000395853 ANKRD23Q86SG2 305 aa10.63□□□□□ -0.71
MSH5-205ENST00000395853 HSCBQ8IWL3 235 aa10.63□□□□□ -0.71
MSH5-205ENST00000395853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.63□□□□□ -0.71
MSH5-205ENST00000395853 PMFBP1Q8TBY8 1022 aa10.63□□□□□ -0.71
MSH5-205ENST00000395853 SPATA31A1Q5TZJ5 1347 aa10.63□□□□□ -0.71
MSH5-205ENST00000395853 RREB1Q92766 1687 aa10.63□□□□□ -0.71
MSH5-205ENST00000395853 EZH2Q15910 746 aaKnown RBP10.63□□□□□ -0.71
MSH5-205ENST00000395853 ANKRD20A12PQ8NF67 263 aa10.63□□□□□ -0.71
MSH5-205ENST00000395853 ZSCAN23Q3MJ62 389 aa10.62□□□□□ -0.71
MSH5-205ENST00000395853 NFATC2IPQ8NCF5 419 aa10.62□□□□□ -0.71
MSH5-205ENST00000395853 ATP7BP35670 1465 aa10.62□□□□□ -0.71
MSH5-205ENST00000395853 CTAGE5O15320 804 aa10.62□□□□□ -0.71
MSH5-205ENST00000395853 IPO7O95373 1038 aaKnown RBP10.62□□□□□ -0.71
MSH5-205ENST00000395853 MAP9Q49MG5 647 aa10.62□□□□□ -0.71
MSH5-205ENST00000395853 NOM1Q5C9Z4 860 aaKnown RBP10.62□□□□□ -0.71
MSH5-205ENST00000395853 BARGINQ6ZT62 677 aa10.62□□□□□ -0.71
MSH5-205ENST00000395853 TMTC2Q8N394 836 aa10.62□□□□□ -0.71
MSH5-205ENST00000395853 TXLNBQ8N3L3 684 aa10.62□□□□□ -0.71
MSH5-205ENST00000395853 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.62□□□□□ -0.71
MSH5-205ENST00000395853 ZNF521Q96K83 1311 aa10.61□□□□□ -0.71
MSH5-205ENST00000395853 APAF1O14727 1248 aa10.61□□□□□ -0.71
MSH5-205ENST00000395853 PRIM1P49642 420 aaKnown RBP10.61□□□□□ -0.71
MSH5-205ENST00000395853 E2F4Q16254 413 aa10.61□□□□□ -0.71
MSH5-205ENST00000395853 FAM184AQ8NB25 1140 aa10.61□□□□□ -0.71
MSH5-205ENST00000395853 PRDM11Q9NQV5 511 aa10.61□□□□□ -0.71
MSH5-205ENST00000395853 ATG3Q9NT62 314 aa10.61□□□□□ -0.71
MSH5-205ENST00000395853 FAM53CQ9NYF3 392 aa10.61□□□□□ -0.71
MSH5-205ENST00000395853 ANKRD36BQ8N2N9 1353 aa10.61□□□□□ -0.71
MSH5-205ENST00000395853 NBPF14Q5TI25 921 aa10.61□□□□□ -0.71
MSH5-205ENST00000395853 ARMCX6Q7L4S7 300 aa10.61□□□□□ -0.71
MSH5-205ENST00000395853 TBC1D22AQ8WUA7 517 aa10.61□□□□□ -0.71
MSH5-205ENST00000395853 CWC15Q9P013 229 aaKnown RBP10.61□□□□□ -0.71
MSH5-205ENST00000395853 POLR3AO14802 1390 aaPredicted RBP10.6□□□□□ -0.71
MSH5-205ENST00000395853 ITSN1Q15811 1721 aa10.6□□□□□ -0.71
MSH5-205ENST00000395853 CGNL1Q0VF96 1302 aa10.6□□□□□ -0.71
MSH5-205ENST00000395853 CCDC196A0A1B0GTZ2 297 aa10.6□□□□□ -0.71
MSH5-205ENST00000395853 WASLO00401 505 aaPredicted RBP10.6□□□□□ -0.71
MSH5-205ENST00000395853 NUCKS1Q9H1E3 243 aaKnown RBP10.6□□□□□ -0.71
MSH5-205ENST00000395853 DUSP27Q5VZP5 1158 aa10.6□□□□□ -0.71
MSH5-205ENST00000395853 PAXBP1Q9Y5B6 917 aa10.6□□□□□ -0.71
MSH5-205ENST00000395853 RPS6KL1Q9Y6S9 549 aa10.6□□□□□ -0.71
MSH5-205ENST00000395853 PRR36Q9H6K5 1346 aa10.59□□□□□ -0.71
MSH5-205ENST00000395853 SUGP1Q8IWZ8 645 aaKnown RBP10.59□□□□□ -0.71
MSH5-205ENST00000395853 PIK3R5Q8WYR1 880 aa10.59□□□□□ -0.71
MSH5-205ENST00000395853 NUP188Q5SRE5 1749 aa10.59□□□□□ -0.71
MSH5-205ENST00000395853 TRIM37O94972 964 aa10.59□□□□□ -0.71
MSH5-205ENST00000395853 APBA3O96018 575 aa10.59□□□□□ -0.71
MSH5-205ENST00000395853 YY1P25490 414 aa10.59□□□□□ -0.71
MSH5-205ENST00000395853 MTHFSP49914 203 aa10.59□□□□□ -0.71
MSH5-205ENST00000395853 GOLGA2Q08379 1002 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms