RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 FAM161BQ96MY7 647 aa8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 DUSP9Q99956 384 aaKnown RBP8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 BACH2Q9BYV9 841 aa8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 TNFRSF10AO00220 468 aa8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 DNM1Q05193 864 aaKnown RBP8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 PDE3BQ13370 1112 aa8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 C4orf17Q53FE4 359 aa8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 TMEM214Q6NUQ4 689 aaKnown RBP8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 TRIM67Q6ZTA4 783 aa8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 PARP2Q9UGN5 583 aa8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 TTC24A2A3L6 582 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 PLA2G4AP47712 749 aa8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 MMRN1Q13201 1228 aa8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 ENOX2Q16206 610 aaKnown RBP8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 TREML1Q86YW5 311 aa8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 INSM2Q96T92 566 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 CFHR5Q9BXR6 569 aa8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 NIF3L1Q9GZT8 377 aa8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 V9GY48 417 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 GPC1P35052 558 aa8.1□□□□□ -1.11
HMGB1P10-201ENST00000395823 RNF144AP50876 292 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P10-201ENST00000395823 CYP4X1Q8N118 509 aa8.1□□□□□ -1.11
HMGB1P10-201ENST00000395823 HPS1Q92902 700 aa8.1□□□□□ -1.11
HMGB1P10-201ENST00000395823 TMC4Q7Z404 712 aa8.09□□□□□ -1.11
HMGB1P10-201ENST00000395823 GPR152Q8TDT2 470 aa8.09□□□□□ -1.11
HMGB1P10-201ENST00000395823 GGNBP2Q9H3C7 697 aa8.09□□□□□ -1.11
HMGB1P10-201ENST00000395823 PNMA6FA0A0J9YX94 578 aa8.08□□□□□ -1.12
HMGB1P10-201ENST00000395823 SPINT1O43278 529 aa8.08□□□□□ -1.12
HMGB1P10-201ENST00000395823 USP5P45974 858 aa8.08□□□□□ -1.12
HMGB1P10-201ENST00000395823 HDLBPQ00341 1268 aaKnown RBP8.08□□□□□ -1.12
HMGB1P10-201ENST00000395823 GNASQ5JWF2 1037 aa8.08□□□□□ -1.12
HMGB1P10-201ENST00000395823 DMGDHQ9UI17 866 aaKnown RBP8.08□□□□□ -1.12
HMGB1P10-201ENST00000395823 A6NHS1 94 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 SPATA31C2B4DYI2 1134 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 OPLAHO14841 1288 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 CTSOP43234 321 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 DAB2P98082 770 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 ORC1Q13415 861 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 SLC27A3Q5K4L6 730 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 ZNF280CQ8ND82 737 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 NUDT16Q96DE0 195 aaKnown RBP8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 HSH2DQ96JZ2 352 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 C8orf37Q96NL8 207 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 USP35Q9P2H5 1018 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 TGFBR3LH3BV60 316 aa8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 MICAL2O94851 1124 aa8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 ATP4AP20648 1035 aa8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 XPCQ01831 940 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 RHPN1Q8TCX5 695 aa8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 SUSD3Q96L08 255 aa8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 TSEN34Q9BSV6 310 aaKnown RBP8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 ZDHHC3Q9NYG2 299 aa8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 SCAMP3O14828 347 aaKnown RBP8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 PHKA2P46019 1235 aa8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 C9orf131Q5VYM1 1079 aa8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 METTL16Q86W50 562 aaKnown RBP8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 LINC00528Q8N1L1 170 aa8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 CSRNP1Q96S65 589 aa8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 PLA2G2EQ9NZK7 142 aa8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 EIF1AYO14602 144 aaKnown RBP8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 GTF2E1P29083 439 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 PRR20EP86478 221 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 PRR20CP86479 221 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 PRR20DP86480 221 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 PRR20BP86481 221 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 PRR20AP86496 221 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 FGD1P98174 961 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 ATP2B2Q01814 1243 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 RAD51AP2Q09MP3 1159 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 NBPF1Q3BBV0 1214 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 IER5Q5VY09 327 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 RNF217Q8TC41 542 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 POLMQ9NP87 494 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 SORBS3O60504 671 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 GNA15P30679 374 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 POU4F2Q12837 409 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 PSMD2Q13200 908 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 TRIP4Q15650 581 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 C8orf34Q49A92 452 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 ALG1LQ6GMV1 187 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 NBPF10Q6P3W6 841 aaKnown RBP8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 AIDAQ96BJ3 306 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 USP20Q9Y2K6 914 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 GRNP28799 593 aaKnown RBP8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 INPP5BP32019 993 aa8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 IDH3AP50213 366 aa8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 ZC3H6P61129 1189 aaKnown RBP8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 BCL11AQ9H165 835 aa8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 MRS2Q9HD23 443 aa8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 VTI1BQ9UEU0 232 aa8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 CAPN5O15484 640 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 CTSHP09668 335 aa8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 PCSK2P16519 638 aa8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 ERCC5P28715 1186 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 FANCCQ00597 558 aa8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 FBF1Q8TES7 1133 aa8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 PIK3R5Q8WYR1 880 aa8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 ZIC5Q96T25 663 aa8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 FOXD3Q9UJU5 478 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 GPC6Q9Y625 555 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms