RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 ESPNB1AK53 854 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 FOXD4L6Q3SYB3 417 aaPredicted RBP11.17□□□□□ -0.62
CDRT1-203ENST00000395667 FOXD4L3Q6VB84 417 aaPredicted RBP11.17□□□□□ -0.62
CDRT1-203ENST00000395667 AACSQ86V21 672 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 LSG1Q9H089 658 aaKnown RBP11.17□□□□□ -0.62
CDRT1-203ENST00000395667 SNX14Q9Y5W7 946 aa11.17□□□□□ -0.62
CDRT1-203ENST00000395667 USP42Q9H9J4 1324 aaKnown RBP11.16□□□□□ -0.62
CDRT1-203ENST00000395667 CCDC173Q0VFZ6 552 aa11.16□□□□□ -0.62
CDRT1-203ENST00000395667 G3BP1Q13283 466 aaKnown RBP eCLIP11.16□□□□□ -0.62
CDRT1-203ENST00000395667 HEG1Q9ULI3 1381 aa11.16□□□□□ -0.62
CDRT1-203ENST00000395667 MYL6BP14649 208 aa11.16□□□□□ -0.62
CDRT1-203ENST00000395667 CLCN1P35523 988 aa11.16□□□□□ -0.62
CDRT1-203ENST00000395667 SUCLG2Q96I99 432 aa11.16□□□□□ -0.62
CDRT1-203ENST00000395667 MBD3O95983 291 aa11.15□□□□□ -0.62
CDRT1-203ENST00000395667 CSB-PGBD3P0DP91 1061 aa11.15□□□□□ -0.62
CDRT1-203ENST00000395667 TATP17735 454 aaPredicted RBP11.15□□□□□ -0.62
CDRT1-203ENST00000395667 NEXNQ0ZGT2 675 aa11.15□□□□□ -0.62
CDRT1-203ENST00000395667 ZNF790Q6PG37 636 aa11.15□□□□□ -0.62
CDRT1-203ENST00000395667 BICC1Q9H694 974 aaKnown RBP11.15□□□□□ -0.62
CDRT1-203ENST00000395667 C19orf44Q9H6X5 657 aa11.15□□□□□ -0.62
CDRT1-203ENST00000395667 RASEFQ8IZ41 740 aa11.15□□□□□ -0.62
CDRT1-203ENST00000395667 WDR33Q9C0J8 1336 aaKnown RBP11.15□□□□□ -0.63
CDRT1-203ENST00000395667 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
CDRT1-203ENST00000395667 SIL1Q9H173 461 aa11.14□□□□□ -0.63
CDRT1-203ENST00000395667 C1orf167Q5SNV9 1468 aa11.14□□□□□ -0.63
CDRT1-203ENST00000395667 ATF3P18847 181 aa11.14□□□□□ -0.63
CDRT1-203ENST00000395667 CASTP20810 708 aaKnown RBP11.14□□□□□ -0.63
CDRT1-203ENST00000395667 PRIM1P49642 420 aaKnown RBP11.14□□□□□ -0.63
CDRT1-203ENST00000395667 AK2P54819 239 aa11.14□□□□□ -0.63
CDRT1-203ENST00000395667 LARP1Q6PKG0 1096 aaKnown RBP11.14□□□□□ -0.63
CDRT1-203ENST00000395667 NFATC2IPQ8NCF5 419 aa11.14□□□□□ -0.63
CDRT1-203ENST00000395667 SYCE3A1L190 88 aa11.14□□□□□ -0.63
CDRT1-203ENST00000395667 EVI5LQ96CN4 794 aa11.14□□□□□ -0.63
CDRT1-203ENST00000395667 CCDC8Q9H0W5 538 aaPredicted RBP11.14□□□□□ -0.63
CDRT1-203ENST00000395667 SLC52A2Q9HAB3 445 aa11.14□□□□□ -0.63
CDRT1-203ENST00000395667 TMEM63CQ9P1W3 806 aa11.14□□□□□ -0.63
CDRT1-203ENST00000395667 NSFL1CQ9UNZ2 370 aaKnown RBP11.14□□□□□ -0.63
CDRT1-203ENST00000395667 NPHP3Q7Z494 1330 aa11.13□□□□□ -0.63
CDRT1-203ENST00000395667 RGPD5Q99666 1765 aa11.13□□□□□ -0.63
CDRT1-203ENST00000395667 KCNJ4P48050 445 aa11.13□□□□□ -0.63
CDRT1-203ENST00000395667 PDIA6Q15084 440 aa11.13□□□□□ -0.63
CDRT1-203ENST00000395667 XAGE3Q8WTP9 111 aa11.13□□□□□ -0.63
CDRT1-203ENST00000395667 RBSNQ9H1K0 784 aa11.13□□□□□ -0.63
CDRT1-203ENST00000395667 LIMCH1Q9UPQ0 1083 aa11.13□□□□□ -0.63
CDRT1-203ENST00000395667 PRPF40BQ6NWY9 871 aaKnown RBP11.13□□□□□ -0.63
CDRT1-203ENST00000395667 DDX17Q92841 729 aaKnown RBP11.13□□□□□ -0.63
CDRT1-203ENST00000395667 ERBB4Q15303 1308 aa11.13□□□□□ -0.63
CDRT1-203ENST00000395667 CPA1P15085 419 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 PTH1RQ03431 593 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 COPS6Q7L5N1 327 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 TTC5Q8N0Z6 440 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 KAZALD1Q96I82 304 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 JAKMIP1Q96N16 626 aaKnown RBP11.12□□□□□ -0.63
CDRT1-203ENST00000395667 TTC14Q96N46 770 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 PPP1R9BQ96SB3 815 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 MYD88Q99836 296 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 GDPD2Q9HCC8 539 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.12□□□□□ -0.63
CDRT1-203ENST00000395667 SASH1O94885 1247 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 IGKV5-2P06315 115 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 PHKG2P15735 406 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 EAF2Q96CJ1 260 aaPredicted RBP11.12□□□□□ -0.63
CDRT1-203ENST00000395667 NAP1L5Q96NT1 182 aaPredicted RBP11.12□□□□□ -0.63
CDRT1-203ENST00000395667 SMC3Q9UQE7 1217 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 TRPM3Q9HCF6 1732 aaPredicted RBP11.12□□□□□ -0.63
CDRT1-203ENST00000395667 ADAMTSL3P82987 1691 aa11.12□□□□□ -0.63
CDRT1-203ENST00000395667 LRSAM1Q6UWE0 723 aa11.11□□□□□ -0.63
CDRT1-203ENST00000395667 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
CDRT1-203ENST00000395667 IFNL2Q8IZJ0 200 aa11.11□□□□□ -0.63
CDRT1-203ENST00000395667 SYAP1Q96A49 352 aaPredicted RBP11.11□□□□□ -0.63
CDRT1-203ENST00000395667 UTYO14607 1347 aa11.11□□□□□ -0.63
CDRT1-203ENST00000395667 NEURL1BA8MQ27 555 aa11.11□□□□□ -0.63
CDRT1-203ENST00000395667 ZKSCAN1P17029 563 aaPredicted RBP11.11□□□□□ -0.63
CDRT1-203ENST00000395667 KLHDC4Q8TBB5 520 aa11.11□□□□□ -0.63
CDRT1-203ENST00000395667 CABLES1Q8TDN4 633 aa11.11□□□□□ -0.63
CDRT1-203ENST00000395667 ZNF496Q96IT1 587 aaPredicted RBP11.11□□□□□ -0.63
CDRT1-203ENST00000395667 BOLA2Q9H3K6 86 aa11.11□□□□□ -0.63
CDRT1-203ENST00000395667 PDRG1Q9NUG6 133 aa11.11□□□□□ -0.63
CDRT1-203ENST00000395667 HIP1O00291 1037 aa11.11□□□□□ -0.63
CDRT1-203ENST00000395667 PIP4K2AP48426 406 aaPredicted RBP11.11□□□□□ -0.63
CDRT1-203ENST00000395667 FSD1Q9BTV5 496 aa11.11□□□□□ -0.63
CDRT1-203ENST00000395667 CYP46A1Q9Y6A2 500 aa11.11□□□□□ -0.63
CDRT1-203ENST00000395667 SIPA1L3O60292 1781 aaPredicted RBP11.11□□□□□ -0.63
CDRT1-203ENST00000395667 KIF1AQ12756 1690 aa11.1□□□□□ -0.63
CDRT1-203ENST00000395667 CAMTA1Q9Y6Y1 1673 aa11.1□□□□□ -0.63
CDRT1-203ENST00000395667 KDM6AO15550 1401 aaPredicted RBP11.1□□□□□ -0.63
CDRT1-203ENST00000395667 GCKRQ14397 625 aa11.1□□□□□ -0.63
CDRT1-203ENST00000395667 CHRNA2Q15822 529 aa11.1□□□□□ -0.63
CDRT1-203ENST00000395667 TLR7Q9NYK1 1049 aaKnown RBP11.1□□□□□ -0.63
CDRT1-203ENST00000395667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.1□□□□□ -0.63
CDRT1-203ENST00000395667 CCDC171Q6TFL3 1326 aa11.1□□□□□ -0.63
CDRT1-203ENST00000395667 SNRPA1P09661 255 aaKnown RBP11.1□□□□□ -0.63
CDRT1-203ENST00000395667 NMIQ13287 307 aaPredicted RBP11.1□□□□□ -0.63
CDRT1-203ENST00000395667 ADCK5Q3MIX3 580 aa11.1□□□□□ -0.63
CDRT1-203ENST00000395667 TPRNQ4KMQ1 711 aa11.1□□□□□ -0.63
CDRT1-203ENST00000395667 ANKRD13DQ6ZTN6 518 aa11.1□□□□□ -0.63
CDRT1-203ENST00000395667 USP48Q86UV5 1035 aa11.1□□□□□ -0.63
CDRT1-203ENST00000395667 DDX54Q8TDD1 881 aaKnown RBP11.1□□□□□ -0.63
CDRT1-203ENST00000395667 FAM227BQ96M60 508 aa11.1□□□□□ -0.63
CDRT1-203ENST00000395667 METTL22Q9BUU2 404 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms