RNA–Protein interactions for RNA: ENST00000394957.7

VSIR-201, Transcript of V-set immunoregulatory receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSIR, Length 4,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-201ENST00000394957 AGLP35573 1532 aa17.1■□□□□ 0.33
VSIR-201ENST00000394957 TSPY26PQ9H489 355 aa17.1■□□□□ 0.33
VSIR-201ENST00000394957 RBM28Q9NW13 759 aaKnown RBP17.1■□□□□ 0.33
VSIR-201ENST00000394957 ZSCAN25Q6NSZ9 544 aa17.1■□□□□ 0.33
VSIR-201ENST00000394957 ACSBG1Q96GR2 724 aa17.1■□□□□ 0.33
VSIR-201ENST00000394957 PSMD1Q99460 953 aa17.1■□□□□ 0.33
VSIR-201ENST00000394957 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
VSIR-201ENST00000394957 LARP1BQ659C4 914 aaKnown RBP17.09■□□□□ 0.33
VSIR-201ENST00000394957 BLOC1S2Q6QNY1 142 aa17.09■□□□□ 0.33
VSIR-201ENST00000394957 CCDC43Q96MW1 224 aaKnown RBP17.09■□□□□ 0.33
VSIR-201ENST00000394957 ATP6V1AP38606 617 aa17.09■□□□□ 0.33
VSIR-201ENST00000394957 AKAP2Q9Y2D5 859 aa17.09■□□□□ 0.33
VSIR-201ENST00000394957 ROBO2Q9HCK4 1378 aa17.09■□□□□ 0.33
VSIR-201ENST00000394957 F6X3S4 739 aa17.09■□□□□ 0.33
VSIR-201ENST00000394957 MNS1Q8NEH6 495 aa17.09■□□□□ 0.33
VSIR-201ENST00000394957 ZNF830Q96NB3 372 aaPredicted RBP17.09■□□□□ 0.33
VSIR-201ENST00000394957 WDR33Q9C0J8 1336 aaKnown RBP17.08■□□□□ 0.33
VSIR-201ENST00000394957 ZNF335Q9H4Z2 1342 aaPredicted RBP17.08■□□□□ 0.33
VSIR-201ENST00000394957 MCM4P33991 863 aa17.08■□□□□ 0.33
VSIR-201ENST00000394957 IKQ13123 557 aaPredicted RBP17.08■□□□□ 0.33
VSIR-201ENST00000394957 JAKMIP1Q96N16 626 aaKnown RBP17.08■□□□□ 0.33
VSIR-201ENST00000394957 USP21Q9UK80 565 aa17.08■□□□□ 0.33
VSIR-201ENST00000394957 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.08■□□□□ 0.33
VSIR-201ENST00000394957 SOS1Q07889 1333 aaPredicted RBP17.08■□□□□ 0.33
VSIR-201ENST00000394957 UNC13BO14795 1591 aa17.08■□□□□ 0.33
VSIR-201ENST00000394957 UPF3BQ9BZI7 483 aaKnown RBP17.08■□□□□ 0.32
VSIR-201ENST00000394957 SLC3A2P08195 630 aaKnown RBP17.08■□□□□ 0.32
VSIR-201ENST00000394957 ZBTB3Q9H5J0 574 aa17.08■□□□□ 0.32
VSIR-201ENST00000394957 MAP3K4Q9Y6R4 1608 aa17.08■□□□□ 0.32
VSIR-201ENST00000394957 IFIT5Q13325 482 aaKnown RBP17.08■□□□□ 0.32
VSIR-201ENST00000394957 DIP2BQ9P265 1576 aa17.07■□□□□ 0.32
VSIR-201ENST00000394957 PRM3Q9NNZ6 103 aa17.07■□□□□ 0.32
VSIR-201ENST00000394957 PLA2R1Q13018 1463 aa17.07■□□□□ 0.32
VSIR-201ENST00000394957 NAP1L1P55209 391 aaKnown RBP17.07■□□□□ 0.32
VSIR-201ENST00000394957 SPC24Q8NBT2 197 aa17.07■□□□□ 0.32
VSIR-201ENST00000394957 CWC25Q9NXE8 425 aaPredicted RBP17.07■□□□□ 0.32
VSIR-201ENST00000394957 SMC2O95347 1197 aa17.06■□□□□ 0.32
VSIR-201ENST00000394957 MCM5P33992 734 aa17.06■□□□□ 0.32
VSIR-201ENST00000394957 NBPF14Q5TI25 921 aa17.06■□□□□ 0.32
VSIR-201ENST00000394957 RPGRQ92834 1020 aaKnown RBP17.06■□□□□ 0.32
VSIR-201ENST00000394957 BABAM1Q9NWV8 329 aa17.06■□□□□ 0.32
VSIR-201ENST00000394957 SYNMO15061 1565 aa17.06■□□□□ 0.32
VSIR-201ENST00000394957 ANKRD13DQ6ZTN6 518 aa17.06■□□□□ 0.32
VSIR-201ENST00000394957 DDX17Q92841 729 aaKnown RBP17.06■□□□□ 0.32
VSIR-201ENST00000394957 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
VSIR-201ENST00000394957 RAB11FIP3O75154 756 aa17.06■□□□□ 0.32
VSIR-201ENST00000394957 IFIT1P09914 478 aaKnown RBP17.06■□□□□ 0.32
VSIR-201ENST00000394957 ME1P48163 572 aa17.06■□□□□ 0.32
VSIR-201ENST00000394957 METTL24Q5JXM2 366 aa17.06■□□□□ 0.32
VSIR-201ENST00000394957 ANKRD1Q15327 319 aa17.06■□□□□ 0.32
VSIR-201ENST00000394957 KIF1BPQ96EK5 621 aa17.06■□□□□ 0.32
VSIR-201ENST00000394957 ZNF396Q96N95 335 aaPredicted RBP17.06■□□□□ 0.32
VSIR-201ENST00000394957 LMTK2Q8IWU2 1503 aa17.06■□□□□ 0.32
VSIR-201ENST00000394957 KRT85P78386 507 aa17.05■□□□□ 0.32
VSIR-201ENST00000394957 TTLL5Q6EMB2 1281 aa17.05■□□□□ 0.32
VSIR-201ENST00000394957 GPATCH11Q8N954 259 aa17.05■□□□□ 0.32
VSIR-201ENST00000394957 NFATC2IPQ8NCF5 419 aa17.05■□□□□ 0.32
VSIR-201ENST00000394957 IL13P35225 146 aa17.05■□□□□ 0.32
VSIR-201ENST00000394957 ZNF526Q8TF50 670 aaPredicted RBP17.05■□□□□ 0.32
VSIR-201ENST00000394957 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
VSIR-201ENST00000394957 ANKRD18BA2A2Z9 1011 aa17.04■□□□□ 0.32
VSIR-201ENST00000394957 CDC5LQ99459 802 aaKnown RBP17.04■□□□□ 0.32
VSIR-201ENST00000394957 PDRG1Q9NUG6 133 aa17.04■□□□□ 0.32
VSIR-201ENST00000394957 TRIM27P14373 513 aa17.04■□□□□ 0.32
VSIR-201ENST00000394957 ARHGAP45Q92619 1136 aa17.04■□□□□ 0.32
VSIR-201ENST00000394957 NACAP1Q9BZK3 213 aa17.04■□□□□ 0.32
VSIR-201ENST00000394957 MYCBPQ99417 103 aaPredicted RBP17.04■□□□□ 0.32
VSIR-201ENST00000394957 MAP3K2Q9Y2U5 619 aa17.04■□□□□ 0.32
VSIR-201ENST00000394957 ATP7BP35670 1465 aa17.04■□□□□ 0.32
VSIR-201ENST00000394957 BRPF1P55201 1214 aaPredicted RBP17.03■□□□□ 0.32
VSIR-201ENST00000394957 SLC39A6Q13433 755 aa17.03■□□□□ 0.32
VSIR-201ENST00000394957 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
VSIR-201ENST00000394957 RNF17Q9BXT8 1623 aaKnown RBP17.03■□□□□ 0.32
VSIR-201ENST00000394957 GPTP24298 496 aa17.03■□□□□ 0.32
VSIR-201ENST00000394957 TDO2P48775 406 aa17.03■□□□□ 0.32
VSIR-201ENST00000394957 CAVIN4Q5BKX8 364 aa17.03■□□□□ 0.32
VSIR-201ENST00000394957 PI4KAP2A4QPH2 592 aa17.03■□□□□ 0.32
VSIR-201ENST00000394957 MX1P20591 662 aa17.03■□□□□ 0.32
VSIR-201ENST00000394957 PI4KAP1Q8N8J0 262 aa17.03■□□□□ 0.32
VSIR-201ENST00000394957 NUP133Q8WUM0 1156 aa17.02■□□□□ 0.32
VSIR-201ENST00000394957 ADGRB3O60242 1522 aa17.02■□□□□ 0.32
VSIR-201ENST00000394957 RTCBQ9Y3I0 505 aaKnown RBP17.02■□□□□ 0.32
VSIR-201ENST00000394957 ANKARQ7Z5J8 1434 aa17.02■□□□□ 0.32
VSIR-201ENST00000394957 ARHGEF40Q8TER5 1519 aa17.02■□□□□ 0.32
VSIR-201ENST00000394957 ST5P78524 1137 aa17.02■□□□□ 0.31
VSIR-201ENST00000394957 FERMT3Q86UX7 667 aa17.02■□□□□ 0.31
VSIR-201ENST00000394957 TICAM2Q86XR7 235 aa17.02■□□□□ 0.31
VSIR-201ENST00000394957 RGS22Q8NE09 1264 aa17.02■□□□□ 0.31
VSIR-201ENST00000394957 TNMDQ9H2S6 317 aa17.02■□□□□ 0.31
VSIR-201ENST00000394957 TMEM51Q9NW97 253 aa17.02■□□□□ 0.31
VSIR-201ENST00000394957 CIZ1Q9ULV3 898 aaPredicted RBP17.02■□□□□ 0.31
VSIR-201ENST00000394957 CCDC192P0DO97 292 aa17.02■□□□□ 0.31
VSIR-201ENST00000394957 TRIM22Q8IYM9 498 aa17.02■□□□□ 0.31
VSIR-201ENST00000394957 ATP2B2Q01814 1243 aa17.01■□□□□ 0.31
VSIR-201ENST00000394957 KDM5AP29375 1690 aaKnown RBP17.01■□□□□ 0.31
VSIR-201ENST00000394957 JMYQ8N9B5 988 aa17.01■□□□□ 0.31
VSIR-201ENST00000394957 PRIMPOLQ96LW4 560 aa17.01■□□□□ 0.31
VSIR-201ENST00000394957 PANK2Q9BZ23 570 aa17.01■□□□□ 0.31
VSIR-201ENST00000394957 KAT6BQ8WYB5 2073 aa17.01■□□□□ 0.31
VSIR-201ENST00000394957 CROCC2H7BZ55 1655 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms