RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 SIK1P57059 783 aa15.67■□□□□ 0.1
SSH2-203ENST00000394848 ILDR2Q71H61 639 aa15.67■□□□□ 0.1
SSH2-203ENST00000394848 SLC4A9Q96Q91 983 aa15.67■□□□□ 0.1
SSH2-203ENST00000394848 PAPPAQ13219 1627 aa15.66■□□□□ 0.1
SSH2-203ENST00000394848 ANP32AP39687 249 aaKnown RBP15.66■□□□□ 0.1
SSH2-203ENST00000394848 LRP10Q7Z4F1 713 aa15.66■□□□□ 0.1
SSH2-203ENST00000394848 LINS1Q8NG48 757 aa15.66■□□□□ 0.1
SSH2-203ENST00000394848 RBM42Q9BTD8 480 aaKnown RBP15.66■□□□□ 0.1
SSH2-203ENST00000394848 NBPF7P0C2Y1 421 aaPredicted RBP15.65■□□□□ 0.1
SSH2-203ENST00000394848 PIP4K2AP48426 406 aaPredicted RBP15.65■□□□□ 0.1
SSH2-203ENST00000394848 ANKRD13DQ6ZTN6 518 aa15.65■□□□□ 0.1
SSH2-203ENST00000394848 BTAF1O14981 1849 aa15.65■□□□□ 0.1
SSH2-203ENST00000394848 NPM2Q86SE8 214 aaKnown RBP15.64■□□□□ 0.1
SSH2-203ENST00000394848 C9orf78Q9NZ63 289 aaPredicted RBP15.64■□□□□ 0.1
SSH2-203ENST00000394848 ERBB4Q15303 1308 aa15.64■□□□□ 0.09
SSH2-203ENST00000394848 PNMA6EA0A0J9YXQ4 647 aa15.64■□□□□ 0.09
SSH2-203ENST00000394848 NEXNQ0ZGT2 675 aa15.64■□□□□ 0.09
SSH2-203ENST00000394848 CWF19L2Q2TBE0 894 aaKnown RBP15.64■□□□□ 0.09
SSH2-203ENST00000394848 TEX13AQ9BXU3 409 aaPredicted RBP15.64■□□□□ 0.09
SSH2-203ENST00000394848 HDAC5Q9UQL6 1122 aa15.64■□□□□ 0.09
SSH2-203ENST00000394848 ATP6V1AP38606 617 aa15.63■□□□□ 0.09
SSH2-203ENST00000394848 SF3B2Q13435 895 aaKnown RBP15.63■□□□□ 0.09
SSH2-203ENST00000394848 PROM2Q8N271 834 aa15.63■□□□□ 0.09
SSH2-203ENST00000394848 UBR2Q8IWV8 1755 aa15.63■□□□□ 0.09
SSH2-203ENST00000394848 NBPF26B4DH59 902 aa15.62■□□□□ 0.09
SSH2-203ENST00000394848 APBB1O00213 710 aa15.62■□□□□ 0.09
SSH2-203ENST00000394848 SLC27A3Q5K4L6 730 aa15.62■□□□□ 0.09
SSH2-203ENST00000394848 NBPF14Q5TI25 921 aa15.62■□□□□ 0.09
SSH2-203ENST00000394848 NBPF10Q6P3W6 841 aaKnown RBP15.62■□□□□ 0.09
SSH2-203ENST00000394848 NBPF15Q8N660 670 aa15.62■□□□□ 0.09
SSH2-203ENST00000394848 METTL22Q9BUU2 404 aaPredicted RBP15.62■□□□□ 0.09
SSH2-203ENST00000394848 C5P01031 1676 aa15.62■□□□□ 0.09
SSH2-203ENST00000394848 A1BGP04217 495 aa15.62■□□□□ 0.09
SSH2-203ENST00000394848 TXNRD1Q16881 649 aa15.62■□□□□ 0.09
SSH2-203ENST00000394848 DNAJC10Q8IXB1 793 aa15.62■□□□□ 0.09
SSH2-203ENST00000394848 CCNL1Q9UK58 526 aaPredicted RBP15.62■□□□□ 0.09
SSH2-203ENST00000394848 IGKV5-2P06315 115 aa15.61■□□□□ 0.09
SSH2-203ENST00000394848 ITPK1Q13572 414 aa15.61■□□□□ 0.09
SSH2-203ENST00000394848 PPP1R42Q7Z4L9 355 aa15.61■□□□□ 0.09
SSH2-203ENST00000394848 C16orf71Q8IYS4 520 aaPredicted RBP15.61■□□□□ 0.09
SSH2-203ENST00000394848 SSH3Q8TE77 659 aa15.61■□□□□ 0.09
SSH2-203ENST00000394848 UPF1Q92900 1129 aaKnown RBP eCLIP15.61■□□□□ 0.09
SSH2-203ENST00000394848 CAMKK2Q96RR4 588 aa15.61■□□□□ 0.09
SSH2-203ENST00000394848 BCL11AQ9H165 835 aa15.61■□□□□ 0.09
SSH2-203ENST00000394848 GRM8O00222 908 aa15.6■□□□□ 0.09
SSH2-203ENST00000394848 SMARCA5O60264 1052 aaPredicted RBP15.6■□□□□ 0.09
SSH2-203ENST00000394848 STARD3NLO95772 234 aa15.6■□□□□ 0.09
SSH2-203ENST00000394848 BAG6P46379 1132 aa15.6■□□□□ 0.09
SSH2-203ENST00000394848 PLBD2Q8NHP8 589 aa15.6■□□□□ 0.09
SSH2-203ENST00000394848 MYD88Q99836 296 aa15.6■□□□□ 0.09
SSH2-203ENST00000394848 LRRC4BQ9NT99 713 aa15.6■□□□□ 0.09
SSH2-203ENST00000394848 EXOC6BQ9Y2D4 811 aa15.6■□□□□ 0.09
SSH2-203ENST00000394848 TNS1Q9HBL0 1735 aaKnown RBP15.6■□□□□ 0.09
SSH2-203ENST00000394848 NEURL1BA8MQ27 555 aa15.59■□□□□ 0.09
SSH2-203ENST00000394848 SEC24BO95487 1268 aa15.59■□□□□ 0.09
SSH2-203ENST00000394848 CYP19A1P11511 503 aaPredicted RBP15.59■□□□□ 0.09
SSH2-203ENST00000394848 HMGB2P26583 209 aaKnown RBP15.59■□□□□ 0.09
SSH2-203ENST00000394848 KCNQ4P56696 695 aa15.59■□□□□ 0.09
SSH2-203ENST00000394848 EN1Q05925 392 aaPredicted RBP15.59■□□□□ 0.09
SSH2-203ENST00000394848 POLA2Q14181 598 aa15.59■□□□□ 0.09
SSH2-203ENST00000394848 BMP2KLQ5H9B9 411 aa15.59■□□□□ 0.09
SSH2-203ENST00000394848 PLEKHM2Q8IWE5 1019 aa15.59■□□□□ 0.09
SSH2-203ENST00000394848 SRGAP3O43295 1099 aa15.59■□□□□ 0.09
SSH2-203ENST00000394848 UTYO14607 1347 aa15.59■□□□□ 0.09
SSH2-203ENST00000394848 ZNF831Q5JPB2 1677 aa15.58■□□□□ 0.09
SSH2-203ENST00000394848 GCKRQ14397 625 aa15.58■□□□□ 0.08
SSH2-203ENST00000394848 IPO9Q96P70 1041 aaKnown RBP15.58■□□□□ 0.08
SSH2-203ENST00000394848 LRRCC1Q9C099 1032 aa15.58■□□□□ 0.08
SSH2-203ENST00000394848 N4BP2Q86UW6 1770 aaPredicted RBP15.58■□□□□ 0.08
SSH2-203ENST00000394848 DEFB132Q7Z7B7 95 aa15.57■□□□□ 0.08
SSH2-203ENST00000394848 LINC00116Q8NCU8 138 aa15.57■□□□□ 0.08
SSH2-203ENST00000394848 IBTKQ9P2D0 1353 aaPredicted RBP15.57■□□□□ 0.08
SSH2-203ENST00000394848 LY75O60449 1722 aa15.57■□□□□ 0.08
SSH2-203ENST00000394848 CICQ96RK0 1608 aaPredicted RBP15.57■□□□□ 0.08
SSH2-203ENST00000394848 SURF6O75683 361 aaKnown RBP15.57■□□□□ 0.08
SSH2-203ENST00000394848 MTX1Q13505 466 aa15.57■□□□□ 0.08
SSH2-203ENST00000394848 EZH2Q15910 746 aaKnown RBP15.57■□□□□ 0.08
SSH2-203ENST00000394848 TTLL7Q6ZT98 887 aa15.57■□□□□ 0.08
SSH2-203ENST00000394848 RAB11FIP3O75154 756 aa15.56■□□□□ 0.08
SSH2-203ENST00000394848 RC3H1Q5TC82 1133 aaKnown RBP15.56■□□□□ 0.08
SSH2-203ENST00000394848 OTUD7AQ8TE49 926 aaPredicted RBP15.56■□□□□ 0.08
SSH2-203ENST00000394848 SUCLG2Q96I99 432 aa15.56■□□□□ 0.08
SSH2-203ENST00000394848 CNTNAP4Q9C0A0 1308 aa15.55■□□□□ 0.08
SSH2-203ENST00000394848 ATP5J2-PTCD1G3V325 749 aa15.55■□□□□ 0.08
SSH2-203ENST00000394848 CRKLP46109 303 aaKnown RBP15.55■□□□□ 0.08
SSH2-203ENST00000394848 INTS5Q6P9B9 1019 aaKnown RBP15.55■□□□□ 0.08
SSH2-203ENST00000394848 UPF2Q9HAU5 1272 aaKnown RBP15.55■□□□□ 0.08
SSH2-203ENST00000394848 RGPD3A6NKT7 1758 aaPredicted RBP15.55■□□□□ 0.08
SSH2-203ENST00000394848 RGPD4Q7Z3J3 1758 aa15.55■□□□□ 0.08
SSH2-203ENST00000394848 CCDC87Q9NVE4 849 aa15.54■□□□□ 0.08
SSH2-203ENST00000394848 TJP1Q07157 1748 aa15.54■□□□□ 0.08
SSH2-203ENST00000394848 HSP90AB4PQ58FF6 505 aa15.54■□□□□ 0.08
SSH2-203ENST00000394848 TTC22Q5TAA0 569 aa15.54■□□□□ 0.08
SSH2-203ENST00000394848 KAZALD1Q96I82 304 aa15.54■□□□□ 0.08
SSH2-203ENST00000394848 LAMB4A4D0S4 1761 aa15.53■□□□□ 0.08
SSH2-203ENST00000394848 ZBTB3Q9H5J0 574 aa15.53■□□□□ 0.08
SSH2-203ENST00000394848 BICC1Q9H694 974 aaKnown RBP15.53■□□□□ 0.08
SSH2-203ENST00000394848 ZBTB1Q9Y2K1 713 aa15.53■□□□□ 0.08
SSH2-203ENST00000394848 A0A087WZG4 1122 aa15.52■□□□□ 0.08
SSH2-203ENST00000394848 GSPT1P15170 499 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms