RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 IFT81Q8WYA0 676 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 SIL1Q9H173 461 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 CTNNA2P26232 953 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 NBPF8Q3BBV2 869 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 ZCRB1Q8TBF4 217 aaKnown RBP3.76□□□□□ -1.81
PHF3-202ENST00000393387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.76□□□□□ -1.81
PHF3-202ENST00000393387 MMRN2Q9H8L6 949 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 STIM2Q9P246 746 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 MTUS2Q5JR59 1369 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 SSFA2P28290 1259 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 RBBP5Q15291 538 aaKnown RBP3.76□□□□□ -1.81
PHF3-202ENST00000393387 MUM1Q2TAK8 710 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 CCDC144BQ3MJ40 725 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 HSP90AA5PQ58FG0 334 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 CCDC129Q6ZRS4 1044 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.76□□□□□ -1.811e-6■■□□□ 11.8
PHF3-202ENST00000393387 CCDC144CPQ8IYA2 1237 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 NEK11Q8NG66 645 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 OGFRQ9NZT2 677 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 DNAI1Q9UI46 699 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 TLDC2A0PJX2 215 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 EEF2P13639 858 aaKnown RBP3.76□□□□□ -1.81
PHF3-202ENST00000393387 SF3B3Q15393 1217 aaKnown RBP3.76□□□□□ -1.81
PHF3-202ENST00000393387 MAP3K11Q16584 847 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 CCDC122Q5T0U0 273 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 USP37Q86T82 979 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.76□□□□□ -1.81
PHF3-202ENST00000393387 IWS1Q96ST2 819 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 VCX3BQ9H321 246 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 SATB2Q9UPW6 733 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 CAPN7Q9Y6W3 813 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 KIF7Q2M1P5 1343 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 POTEB2H3BUK9 544 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 MRPS9P82933 396 aaKnown RBP3.76□□□□□ -1.81
PHF3-202ENST00000393387 E2F5Q15329 346 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 INTS8Q75QN2 995 aaKnown RBP3.76□□□□□ -1.81
PHF3-202ENST00000393387 DDX54Q8TDD1 881 aaKnown RBP3.76□□□□□ -1.81
PHF3-202ENST00000393387 TSC1Q92574 1164 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 SECISBP2LQ93073 1101 aaKnown RBP3.76□□□□□ -1.81
PHF3-202ENST00000393387 FSD1Q9BTV5 496 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 SAMD15Q9P1V8 674 aa3.76□□□□□ -1.81
PHF3-202ENST00000393387 ZBBXA8MT70 800 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 PAFAH1B1P43034 410 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 KARSQ15046 597 aaKnown RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 NUTM2DQ5VT03 806 aaPredicted RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 TTC19Q6DKK2 380 aaPredicted RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 ZNF397Q8NF99 534 aaPredicted RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 PPP1R9BQ96SB3 815 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 VCXQ9H320 206 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 PPFIA3O75145 1194 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 KRT14P02533 472 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 MCM2P49736 904 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 LIG3P49916 1009 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 IRX5P78411 483 aaPredicted RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 PSMD2Q13200 908 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 STIM1Q13586 685 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 CACNA2D4Q7Z3S7 1137 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 VPS37DQ86XT2 251 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 WDR75Q8IWA0 830 aaKnown RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 TMCO5AQ8N6Q1 288 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 PDZRN3Q9UPQ7 1066 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 CCDC171Q6TFL3 1326 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 KRT13P13646 458 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 DESP17661 470 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 INPP1P49441 399 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 GUCY1B3Q02153 619 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 NOLC1Q14978 699 aaKnown RBP eCLIP3.75□□□□□ -1.81
PHF3-202ENST00000393387 TSNAXIP1Q2TAA8 658 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 CCDC38Q502W7 563 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 SH2D4BQ5SQS7 431 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 NBPF10Q6P3W6 841 aaKnown RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 CCDC25Q86WR0 208 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 C17orf53Q8N3J3 647 aaPredicted RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 UBLCP1Q8WVY7 318 aaPredicted RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 SYTL4Q96C24 671 aaPredicted RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 TSNARE1Q96NA8 513 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 SMTNL1A8MU46 457 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 MYCNP04198 464 aaPredicted RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 NOP2P46087 812 aaKnown RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 PIP4K2AP48426 406 aaPredicted RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 UAP1Q16222 522 aaPredicted RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 LARP1BQ659C4 914 aaKnown RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 CCDC155Q8N6L0 562 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 FAM76AQ8TAV0 307 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 NUF2Q9BZD4 464 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 IQCGQ9H095 443 aaKnown RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 C9orf78Q9NZ63 289 aaPredicted RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 LZTS1Q9Y250 596 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 SH3BP5O60239 455 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 BAG2O95816 211 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 WWC2Q6AWC2 1192 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 SMC1BQ8NDV3 1235 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 SMARCC2Q8TAQ2 1214 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 AFAP1L1Q8TED9 768 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 ARFGAP3Q9NP61 516 aa3.75□□□□□ -1.81
PHF3-202ENST00000393387 RRAGDQ9NQL2 400 aaPredicted RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 EIF3AQ14152 1382 aaKnown RBP3.75□□□□□ -1.81
PHF3-202ENST00000393387 SYF2O95926 243 aaKnown RBP3.74□□□□□ -1.81
PHF3-202ENST00000393387 RLBP1P12271 317 aa3.74□□□□□ -1.81
PHF3-202ENST00000393387 CHMP4BP1P59074 171 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms